XLOC_009315 (gene) - C. hemisphaerica

Overview
NameXLOC_009315
Unique NameXLOC_009315
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000246:345780..350910+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009315 ID=XLOC_009315|Name=XLOC_009315|organism=Clytia hemisphaerica|type=gene|length=5131bp|location=Sequence derived from alignment at sc0000246:345780..350910+ (Clytia hemisphaerica)
TAAATATCTATAATTTTCTACCTTTCTCTTTACAGGTCGTCTATAAAAAA ATAagtcaaaagaaaagaataaagaaaaaacaaaatgattttaaacaaaa aatgcaTGGAAATTGTCAACACGGTGATAAATGCTGGGAATTGTAATCAT CTGTCAAGACTTGACTGCATGCAATTGGTTGATCAAAAGACCATTGACTC GGTAATTTTGCCCATATTGCTGTTCTGGGATCCATTAGAACAGCCATGTA AAACATTTATTTGTCCATTGTGCCATCAAGATGGAAATCCAAATTCAAGA TTGCACAGACcacaaactttgtttgatagtTGGGAAGctggaagttcaaa ttcaatGATGCCACGAAAGATATGGGATGTAAACTGGTTCATTGCTTTGG TGGGTAGACGATATCATCGTATGAACTCACATTCAGTTAGCTCGTATCAC GCTGGTATACTTCGTCAAATGAATCCAGCTGAGGTCCCGTTTATTTTGAG CCACGATAGTGGACTGACAATGGAGGCATTTGATTTGGTAAATCGGCTTG TTGATCATGGTAATTCCTTTTCAGTAACGCAAAAGATTTTTACGGAGGGT ATCATTGACAAATATCACCGTAGAAATGCATTTTTCTTGCCAAATAAATA TGAATTTAATGAAATCACCGATGAAGCTATAACGCGGCCACCATCTGAAC AGTTTTTGCGTGGTTGCTTTTTATACAACTACAACATGTATAAAAAAGTT TATAACGAAAAAATGCAAAGTATCAACTGTGAGTATCTTAGTTGTGACCA CACGTTTAAAGTTGCGACTAACATCGGATACCTTGACCAAAACAAAAAGT GGGTTAAAGTTGTCGACTCCTTATTTCTATTTATGAATGAGAAAGGACAA ATTCTGGGATACAAGATGTGCAAAGGAACATCATTCAATCttgttgaaga tattttcaaagACTTATCCGTCCGTAACCCACACATCACGCACATATACT TGGATAACTGTTGCACGTGGAAACATAAACTCGCAGAAGTTTTCCCGAAT GCTATagtaagattttttttgtttttgtaaactCTTTTTGTCCTTATTCT AATTATCTAGGGAATTGACAACCTCGTCTCCATGCCTAATCTCTTTTTTT GATTCAGGAGGAGATTAATACAGAAGCAGCCAGGGGAGAGATTTGTggct attacagaaaagttgttaCTCCATCTAACTTTTATTACCTAGCAAATCTA CCAATGAGAAGCcataagcaaaatcaattaacatgctataatagatctcg tgaacctacaaagaactgtaatagACCAGttattcatccatcataaatct ttttctttgactttaatGGATTAAATTAAGGaaactttccagtgtgaacg cgcccCATGATTTTGATTTGATGGTAAAACAATACTTTTATTAGAGCTTT TATTAGTGAGAAGGCACTCCTTGAATAGTGTATATCAACGTGAATTCGTT GTATTTTGAACCGTTTGGTAATTTAAGTTCATTATTAAAACATGTCAAGC GCTTCAAAACCTACGCCAATCCGCAATTATAACTTTCGCTTGAACGTTTC ACGTACATCAGCAGTAATAAAAACCTTTTCTTTCTAGACTTTCATCATTa ttaacaaaacatttttagaatttaGGCACGTTAGACCATTAGCATGAAAC TTTCAGTCAACCTTGTGCTCGTGTATCACAGGCTTTATTTGcactactga tggacgccagagaatatatACAGCGCTATATAGTAAAGCacaaaaaagct gataatgcgcaggaAACAAGGTTGACTTTTAATTTGAATACAtcctaaat ttaaaaaatgacgtcgCTTCAAACTAATATGAATACGCAAATTCGAAAAA TGCTAATCTTCTTTCTTTTAGGTGAAATTAGATTTGTTTCACGCAGTGCA GCGGTTGGTAAAAACAATCAGTAAACGGCACCCTTACTGTCAGGACATGT GCAAAGAGTTGACACTCGTCTTTCGAGACATCAATGATACTGGTGATGAA CGATCAAAGCCAACCCCACCACcaaatcaaattataaaaaacatggaGAC ATTCCTCACAACCTGGGAGAATGTCGAATTCAAAGGCTGGAAAGTCTTGA CCAGCAAGTTCCTAAAACAGTGGGATAATTTAAAAGTGCATGTCGATCTT GGATGTTTATCTGGTATTCCTGTAGGTATGTAAATTGCCACCCCTGCCTC AGCTACCCGGTGGTGTTTTGAAGCCCAACGAGGTGATTGTCTTCGTAAAG AGGGAGGAGACACTCATATCTTCAAGCAAGAAACAGTACACAATATGGGG GCATGTGTATTTTACTTAAaaacatctactttataagaatcaaaggcATA ACCCTTGAAAGACTGCCATAAACCGTTCGGTAACtatttcttacaaagta aacgaGGAACAgcttataagcaactactttgTAAGAATCCACGCGTAAAC TCTTAAGGCTATTAAAAGTAGGCTATTTTTGAAAACACCTGCTCTAGAAG AGAGGGAGTTGTTCTTCCGATTCTATGATATTTATCGGTGCTTTATAAGT GCTTTTCACGGAAGGCAGATCCTTTCTGGGCCCCAGCAGTTTTATTGTTC AAACCATTTGAGCGGAGGTCACTTATTAGGTTAGTTCAgaggttttattt tttctttttattttgaatcacAGGCCACGGAACCAACAAGAACGAAAACC TTCACCGGCAAATGCGGATCTTATTGCCAAGAAATAGACTTGGTGTCGAC ACAGCGGAGGCACTTTTTAACTCGCTATTTTATTATCACAACGAgagaaa gaaaacgaaaatagGCACAAAGGGACAACAAGTCAATATCAAACACGTCT GGCCTATCTGGCAATTTGCTAAAGAAGATCATCATTTCGGGATTTCCGAT GCTCCTGTCAATAACAACATCGACTTCGACGAACCGTTTCTTATCGATTC ACTCTACATGCATGACGATGAAGACATACCATGTGAACATGCCGATCATA GCGGTTACAATGTAAAAGAGTCTATTTGTAAGTATACTATGAAAAttcct tgagtgccccccccccccGGTCGTAAGAGGTAGATATACTTTATTTGCTT TATATTTATTGCATATTAACACAAGAAAAATAAAGAAGCACAACATGTGT ACTTTTGTATCTGTTTTATAATCTTCTCTTTTTTCGGAAATCCTGTAGAG TCGATTAGGGAATTAAGGAAATGTTAACTATTGTTTAATTTTTTAGAATG CAAATTTATAATCAATTATTTATTTTCCTTATAGCTGGGAGAACGAGACG AATCATCGCCATTGCGAAACAATTCAAGGAAATTCAAGCGAAGATGAATT CCGACCTGCTCTACCGCCTCTTTGGTACCAATGGTTTCGCCTCTTTACCT GCAGATGTATGGCAACCCATGGAATATCTGCAGGCTCAGGAAATAGATAA CAATTTTCCAATCGATTCAATCATGCAAACGCTAGGTCTTGCTCAAATGA GACATTCTGGTCCTTTTGTTGATACTATTGCACAGCAGCTATCAGATATG CTTCGGTATACTGATGTCAGCTCGAAATACCAATCATTTCTTGAGAGGAG TGGTATAAGAAAAGATAGTCCAACCGAAACCATCATTTCTAACCTTTTTT CAATCATCGAAGATGAGCTACAGTTCAATGAAGATGATTATGAGGTGTAT TGCGAAGACAAAACACAATCACATCCAGAAGCTTTAGCAAATTCACTTGG AATCATGATCGTTTTGGTACCAGCTTGCTTTGGTATGCCGTTTTTGCCAA TTGCCCCGAGGCAAGGCCTAGCCATACAAAACACGTTTTACGTATGGTGT GGGCCAAACAAAACCCAATTTACATCATTGATAAGTATGGTAACCGGTCC AACTAAAACAAGCTGTAGGTGCGGAAGGAGGAGCAAGAAAGAGGATTCAT CCCATTGTCAATACAATGACAACTGTTCATGCTTAACGAGAGGCATTAAA TGTGGCAAATCTTGTTTCTGCAAAAGATGCCAAAATGGGAGACCTGAAAC TTTCTCCTCTaaacgaagaagaagaatccAACCATGCCTCAGTCAAACGT CGACCCTAACGTCTTTCAGTGCTGCTAATGAGTCTAGCAACATCATTTCA AACCGGATGAGTGAGGTAGAATCTCTTTTGCTAGAAGCAATATTGTTTGT TCTCATTCGAGATTTCGAGATCGATTTTGTGGGTAAGTTTGATGAGAACC ACCTCACTTGCCTCATTGTTGAGGAATACGATACAGTTTGGAAATGTATC TCAACAAAAAACGATTTCGACATTTCTAAACAACAATTAACAACCGAACT TGTTAAAAAATGGTTAAAGCATCGAAAGTTTCGTCTCTTGTTGGAGAAAG AGAAAAGGAAGTCAAAAGAAAACGTTTAGAATACGAAAATACGTCCTATA ACTGCACGATTGAAAGTACACTGAAAACTATGAATATTTTGGAAGCGAAC CTTGGGCAcatatttaattatttttaatatcGATTATCGCTGTAACTCAA ACTATTTTAGGTAAATACACGACCTTCTCATAGCGAACCAGTAGGATTTT CTcagccaatggggataaaaataacggactgaaactcgatggggattatC TTTCATGGctagggatttgaattccattgtttcaTAGTCAGGAAATTCAG TgacattttgcagtgaggattatCTGATTATCTTCAGTGGGGCAAAAATT agaatataattttccaccagggACAATATTTTGAGCAATATTTCCAATGG GAAGGGGTCCCtgtaggtctgtgagaagggccGGTGTttaaatatttcta tttttccaAGTAGAATGCATTTTCAAACTATGAATTTTTCATATCCAAAA GCTTTTTTAGCGAATGgagaaatattcaaaacattCCATAAAACTGTGCT ATTTTTAATAAATTACTTAAAGCCTTATACTAAAAGGAGAACCCAATCTT TAAGGGCCCGACCGGAACTTTACTTACCTTTCTATTTTTCATCTACAAGG TGTCCTCAAAAATGATGCCTTAAGGGAAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016664TCONS_00016664Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016664-proteinTCONS_00016664-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000246supercontigsc0000246:345780..350910 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.01 0.04 0.16 0.19 0.31 0.58 1.11 0.97 1.34 1.47 1.7 1.11 0.01 0.01 0 0.03 0.18 0.1 0.05 0.05 0.02 0.02 0.33 1.04 0.01 0.02 0 0.01