XLOC_009208 (gene) - C. hemisphaerica

Overview
NameXLOC_009208
Unique NameXLOC_009208
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000240:68941..78822-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009208 ID=XLOC_009208|Name=XLOC_009208|organism=Clytia hemisphaerica|type=gene|length=9882bp|location=Sequence derived from alignment at sc0000240:68941..78822- (Clytia hemisphaerica)
GAAAGTCTTTTGATAACCCTCTATATATAGTTTAACATGTTTTTTTTAAT TTATAGTATATAGAAAATCAAAAAATCAGACGTCTCTCTATGATGGACGC TGAGACTGAAACAAGTAAAAACTTTTTTTGTTTCACTTCTTCTTATAGAA ACTCCTTTAATAACAATGATTACTACTTGGTTCTAGTGGAGCTTTATTTC AAAATGATTTGTTTTGTTTACTAGATCCTAACCCGTTCAAGAAGGATTTT GTTGCCTCCATGAATGACTTGCAAATTCAGGTAATATATATACAATACGC AATTTTCATTGAAAATCTGTGTCATCTCATCTTCAACTGCTCACTAATGT CTCAACATCATGTTTGAACAATTACAGTCAAACCTGTCTCTGTTCTTAGT TTTCAAGAGAGGAATCAAAGGAGGTTCTTGAGGGTTTTAATATTTAAGAT TCTCTAATAAGCAGAAGCAATTTAGGCTCAAATAGCATTCGAGTTGCACC ATCATGATTATTTCAGCTGGAATTTGTACGAGTTTCNAGAAGCAATTTAG GCTCAAATAGCACCATCATGATTATTTCACTGGAATTTGTACGAGTTTCA ATCGCACAGCATTTTGAAATGATTGGAAGACATTGAAATTCATTACATTT CTTTTCATATAGAAAGTAGCTAACCTGTAGGGACAAANCTATCCCTGGCG AAAAAAATAGCCCGAAATTTTTACAAAAAGTTTTTACAAGCTCTCGTTTG ATTTGGTTGGTCGTTAACCTGTAATAAAACAATTTTGTTACTTTTTCTAA AGAACGCGTCATCTCTATTACTTCAAAAAATAACCAATTGGTGAAGTCTC TTGTAAAAACTCCAGCTCATTCCAACCTGTAAGAGCATCCAATAGAAAGG AACATGGGTTCGAAAGTCGTACAAAAAACAGATTTGTACAAATTTGCTAC TTTTTTTAGATTCTCCATTCCAGACCCCATTACTCAAACAGTTCGAGAAT CGAACTACTCGAAATTACTTGAACTTACTCGAACAATTAAAGTTTAACTC AAGTAATTCCTTTACTCAAACTTTTTTAAATTTTCAAAAATTTGAGTTCG ATAAGTTCGATTAGTTCGATTAGTTCGATTGAAGAAAAGTTCGATTAGTT CGATTTTGATCAAATTTTCTTCTAATTTTAGGAGCAAAAAGCAATTAAAT GTTCCTATTTTATGAGGTGGTATGAACTTTATAATGGTTGAACTAGAATT GGCAGATTTTTAAACTTATTCGAACTTTACTCGAACTTTTAACATGTACT TAGAATCCAAAGTTCGGTTAATTACTCGAACTTATGTTTTTTTTTAATTG TGAGGAGTTCGAGTAATTTGTTTACTCAAACTTTACTTGTTCGAGTAAGT TCGAAAGAGTTCTAGTAAAAAAGTGGTTTGAAAAGTTCGAGTAATGGGGT CTGGTCCATTGGAAGGAGTGAGAATGCGTTTGAGAATAGACAAACTGGTA AATGACTTTTTCAATTGTTTTAAGTTTGATAACCAGAACTATGCTTTAAA CATTCTACTTTATACACAACTTTTGATTGTTTTGTTAGAATCCCAAATTC ACATCGAGTTGCAGCTTGGATGCTGACAGTCTCCTTGGAACCAACTTGAA TAATTCTTATCCACAAAACTTACAAAAAGCTCACTCGGTACCACAACTTA CTCAAGCAGCAGCTTCGACAACCAGCTCATTATCTAGACAAGGTAAAGAT CGAGATTGTAACTATACTATTGAATGTATACTGTTTTTATACTCATTTTA TTAATAGTACTAAATTAAAAATTAAAAATCATATATAAATAAAAAAACAC CGACTGCAGCAAATTTTACATTTATTTTTCAGGCTCACAAATCCAACGCA AGAAGACAACAGAGGCCAGCGCCATTCCAGAAACTCTTCTCCATCCCAAA CTGTTGCAAGAAAATCAGAATCTCAAAGAAATGGTGGCCAAGCTTGAAGA GGAGAAAGACAATGTAATACATTATTTTAACTGTTCATGTTCTTCACTTC TATCACATCTCCTTTTTATAGACAGACACCTTCCCATAGTGGGAATAGGC CCTAACCTAAGCTAGAGATCACTGCACAAATGTAAATAGCAATTAGAAAA AATAAAAGTAAAATAAAAATAAAAAGGTAAACAAATATTATTAGTTACAC GGTCTTCTCGAGGTGGGATACGGGATATACAGGGTCAGTAAAACCGTATT GGTGGCGAGGCTTNNCATTCGTCAATATGCAATGTCTTCTTTTTTTTCTC AATCGAACGTGAGGGAGACAGATACGGTATATATCCCACCTCCACGTGAT GTCTTTCGACCAATGAAATCGTTAGAATCTTACTGATGCGGGATAATTTT AATTATTCCACGCCCATCCCAACCTACTATCAGAGGCTTAATCATACCAA TCCAATTTATCAATACTAACTTCTTTAAGCAAATTTTCTAACAGATCTAC CATACGTGAATTTTGAGCACCCACTAGGCCTTTTCGATCTGACCCAACAA GTTATTATTTTTCTTGGTAATCTATTCCAAGGCATATGTACTACATGACC AATCCATTGCAGTTGTTTTTCGTTATATACTGTACGTATTAACTGACTTC AACGATAGTTTTTCACACGAAGCCGATATGGACAATCGATTCTGCCAGAC AAAAAAACAATTTGTGTCACACATAACTCTCTCAAACATTGATTGTGGAA ATTCGACCATTATCTCAACAACTTTTCCGTAAGACACAACCACAGTCTGC AGCATACAACAGAATGGGTATAATAAATGACAATACACTTTGCTTTTTGT GCTGTAATCGATATTGCAAGAGCTAAAATTCGATTTTCTGAGACAACCAA AAGCATTTCCGAATTCGCATTTCAACATTCAAGTTGTCAGTACCATCTGT CGTGATGATATACCCAAATACGCGCATTGATTAACATTCTGCTGGTTTGT TTTGTTCTCCTTTGGAGCACTTTTTTCATATCTACATTTCGAGAGTTTAT CAATGGTGTTATAGCGATTCTTTGTTTTCTTGAACCCAACCTGGTTGGGC TTTTGGTTTTGGAGGTAATACTGAGTATCAGGCTGATGTCACAGATTGGA TAAATTCGGCGTGGGAAGCATTTTCAGGGGTATTGAGCCTAACTTGATCA CAAAAGATTTGGCTTAATTGTTTCTTCGTTCAGTAAGGTATAATCAAGAT TGAGTAGACGATTTCGAGGGGTGGTTTTCTTTTTTAAGCATTTCATAATT TGAAGTTTGATTATTATGGCACCATGGTCTCAATGGTGTCGATCAATTGT TCGGTTGTACCATCATCTGCGATACGATGAAACATTTCAACATTTACTAG GAAATGGTCTATCTGGTGTTTGTTTCTACTCCTTTGATGAGTCCATGTTG CATAGAGTTTCTTTGTAAAGCATGTCGTACTTACTTTCAGTTCATGAATA GCGAGGTGTGTAAGGAAACGTATACCTGCAGAGCTTCTGTGGTTAAGACC AAACTTTCCAAGTGGGTCATCGTCATTTTCTGTTCCACAGCAGACACTTG CATTGCAGTCTGAACCGATTATCAAAATATCATCATTACACCTTTTATTT ATATAGTTTGTAAATTTTCAAGGTAATCGTTCCATACGTTTTCGGATGCG TTACTGATAGGGGCATAAGCAAGGAATTTTCCAACATCTTGTTTGTGTTT ATCTTTGACACAAAGTCTAATGGCAATGATCCGAGCACCATTGCACCCAT AACATCTCGCTGTGACGACAGCATTATAGCAATTCTTCAAGTCGAGATTG CGTTTTGATTCCACGTACGTTTTGTGAAATAAAACAAGTGTTCCTAATTT TATGTATGTTAGTCTTTCGTTCGTTCTTCTTTTCTTCACCGTCATGGTTG TGAGCCACGAGGGAGTGTAATCGTTCTCAGACATAGATGGAATTAGGACG AAGAAATGAGACACAAGAATTTATATAAGTTTTAAACACGTCTGAACATG TCCCTAGCCCAAGAAAGAAGAGGGTGAGCTAAAAACGTGCTCACACGGTA TCTACAAAAAAGGTCTGGAACTAGCTAGAAAATGTAAATGGTAGCTAATC AAATATAAAATAATTACGGCCAATATGGCGCTTTCTTTCACTTTCGTTTA CAGTAACCTCTTGGAATGTCTGCAGCTTTCCGTCTAGTTGTTTCTTTTCT GTTTCATTAGCTCTGAAAGACTTTCTTCCTCTTACAGTGTCCACCCGGCT TTTCAGCACAGGCGCCCCTTAGTGTGAAGATTTCGTCCCCGTAGACTTGT TCACTTATTCCTAATGGAATGAATTTTTTATCTTTTTATAGAGCCTGACT CAAATGAGTGAAAATGGACGATTTGCTGATTCTTTATTTCTATCATTTCA GCTGTTGAAGGTGAACAACTTATGGGACACTGACTACCATGTCCTCAAGC AGAAACTTGACAAACTGGAAGAAGATAATAACAATAAAAACNCATGTCCT CAAGCAGAAGCTTGACAAACTGGAAGAGGACAATAACAATAAAAGTAAAG AGATTGCCAGTCAAGACAAACACATCAAGAAATTGGTCAAGAAGTTGGAG TTGATGTTTATCAAGAATACTGATGAAGATAACCAACCTTTGTGGGAGAA AGTTGCTGGTGATGAAGGAGGTAGTAATGGTGAGAATGAAATGTGCAGAC CAAATCAAGATGGTGAAGAGTTCAACCAACAACAACAACAACAACAACAA CAAACTTCTCAATACAATCAACAACAAATGCAACATAATCCCTCTTCAGG ATCAATGATGGCACCAAACAACTCTTTCCAACAACAACAGCAACAACAAC AACAACAAACTTCTCAATACAATCAACAACAAATGCAACATAATCCCTCT TCAGGATCAATGATGGCACCAAACAACTCTTTCCAACAACAACAGCAACA ACAACAACAACAACAATCTAATCAAAACAATAACATACTTCAAGAAATGA AAAAACTTGAATACGACAACCAGGTGGGAAATAATACTTGATTTGACTCG TGTCCAGATTTGTTCCATAACTTTGATAACTTTGCAACTCTTTAAATATT TTTATTTTTTTGTGTAGACGTTACAGAAGTACATTTACGATTTAAAAGAA GAAGCTAAGAAACAATTGAAGCAGAAAGATTTCGAAATCCAAAGAATGGC TGCTGGAATGAACAACTCCTTGCAGAAGTGTGACAAGGTAATAAAAGTGG ATAAAATAGACCATCGGAGTTTTTGATTTTTCTAAAAAAGCGATGCATTG TGGGATTGTTTCGGCAGTATTACAATAGAAATCTCTTAGGAATTCCTCGA GGGAATTATATTGTAATACTTCCGAAACAATCTTACAATGCATCACTTTT TTAGAAAAATCAAAAACGCCGATAAGATCTATTGGTGGTCGATATTTCAT TTTTTCCCTTTTTAATAAAAAGGCTTCATAATTTCTATTATAACTTCAAC GAGTAAATATTTTATCTTTTAGCATCTTTCAACCACAAGTTTGTCACCAT CGAGCATTGATGCTCTTGGAGGTAATTTTAATAAGCAAGATTTTTCTTTT TATTTTCTCATTATTAATTTTTTTAGAATTTTCCTAACTTTTTTATTGAA CTCAAATTTTTCAGTGAGAGCTTTAAGTTTGAAATGCATAATAGCTAATG GTAATTGCATGAAAAAAAAAAACAGAAAAAAAAACAGAGAGTACCACAAA GTCATTTCTTTGGTTTGCTTTCTCCTTTCAGATCAAAGTGAGTTGGAGAT ACTTCGTCACCAGTTGAAGGTGTACGTTGAAGACTTTCGCATGGAGACTG ATGAACGGAAGAAGCTACACAATGAAAATCTCAACTTGAAGAAAGAACTC TCCAAAACTACCGAAGATAGAGAGCATCTTAAAAATCAAGTATATCGATT TATTATCAGCTTTTTATCAATTCTAAAAAATTCGACCTTCAAATATCTTG GAGAAAATGATTGGCAAGTTTTTGTTTGTGGTTCAATGAACACCGGAAGT TATTTTCTTGACCCATGTGTTTTCACCGATCTTTCTTTTAGTTGAAAGTG TACGAGGAAGACTTTGCTACAGAACGCAACAAACGCATCCAGCTCATGAA AATGCAACAAATGCAAAGCCAAAATGACGTAACCATTTTTTTCAATGTGC AATTATTGCTAAACCAATCTTTTTTTTTGTGTTAAAATTTCTTTATACCC AAAATAATCTAATCCAGTTGTTCATTCTAAAAAGAAAAATACTGTAGTTT ATTTCATTAACATCCTCCTTCACCTTTCAATGTCCAGATGCAATACCAGC AGCGAGAATATCAAGAATATTGCCAGCTCATGCAAGAAAAAGAACGCATC AACAGTCGCATTAAAGATCTGGAGTTCCATCAAGGAGGAAATGGCGGAGG AGGGCTACCTCAGGGAAGGAGCAATTCTGTGTCCTCCACATCTCGTCCTA ATGTAGGTTGAAAGGCCTGATCAGGAGATTTATGTTTCGTGATTCGACGG CTTTCTGAATCTTTTCTTTTCGATAAAGCATTTTCAAAGAAATTCTATTT ATTCAGTTATTCTTCCCTTTTATTGTGGGATCATTGTTTTTCAAGTTGGA GGTCAATGCCAAGGATGGGGAGGTGGAGATGGGGGATCAGACCCCCTAAC TACTAAGTTCTTTCACTTGTTTTTTTCTTTTTTTTAGAAATTTCATGCGC CGCTGACACAACAATATTCTGGGCCATCCTCCTTACAATACTACCCACAA CAATCGAAATATTTGGACTATCAACAGCAACCTTCCAACAACTACCAAAC ACCTCAACCCTCTCCTCTCGCCTTCAACAATCAAAACAATGGCCTACAAA CCTCCCCTACTTACTCCATGATGTCCAAACTTCCAAATGCTTCACCCAAT CACAATGATCGTCACTCTTCGCCTTCTTCAACAAATCCATTCTCTCAATC AGCCAATCAAAACTCTCAATTTTCTCCCCCCTCTAATCAAAATGATCNTG TCCAAACTTCCAAATGCTTCACCCAATCACAATGATCGTTACTCTTCGCC TTCTTCAACAAATCCATTCTCTCAATCAGCCAATCAAAACTCTCAATTTT CTCCGCCCTCCAATCAAAATGATAATTTTTCAACTTCGTCCAATCAAAAC AGTCGTTTTCAGCAGTCATCCAATCAGAGCGATCGTTACCAGAGATACAA CAATCCTACTGGTGGAGGCGAAAAGTCGTTTTACCACAACAACCAATTAA GAGATGAAGAGAAAATGTGGATGCCACCTTCTCCAAACTTCAACAGTTCA GAAAATGGGAGCAAGCGTGCACCTTCAGAATCGAGTTACAGGGTGCATAG GTGATGGAAAGAAGGATGAGTTGTTTTGAATAGTGGTGCAGCAAAGAGGC GAATCGGGAAAACGTGTCTTTCTTCAATGTCAATATCTGATAATTCTTAC CAGAAGGATTTTATGGATCAACTTGGTAATTTTCGAATTAAATACGTTTA GTTGATCTCTGATCATAAGATAAAATTATTTTAACATTTTGGTTAACTTT GGTGAAGAGCTGGAATGCAATTAAGCTGATCTTCAGTATGGTAAAACTTT AATGGTGAACTTGGAAAGCTAATTAGATGGTTCAGTTCAAATAATATTTT AGATTAAAAGAAAAAAAATTTTTGTCTTCGTTAAATAAGTTTTAGTCTGT AATGCATTATTTTTAACCTGATGGATTTTTGTATATAGGAAATTTTATTT TTTTTCAATCATATTTAAAATTATTTTGTATAGAACTACAAAAGTTCAGT GCTGTTATTGTCTACTGCTCTTAAAATGGTTAGGACGTCTTCTTTGTTTT ATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGAT TGATTGATTGATTGATTGATTGATTGATTGATTGATTGACTGATTGACTG ATTGATTGATTGATTGATTGACTGATTGACTGATTGATTGATTGATTGAT TGACTGATTGATTGATTGATTGATTTTTATTTATCTTTTAGAATAACTAA ACAAAAACAGAATAACTAAAAAAATGTCATTGAAATTATTCCGGCCAACG AATGCACTTCAGAATTTCATTGCATCTCAATGTCGATTGTTGTCTAATTC AAGCGCCCTACTGGCAGGAGGGAAGTCAAGAGTTTTACGTGGGCAAGCGG AAGACGCGACATCGTATGGTCCGTTGACCGACCTCCCTGATTGGACGTAC GTTGACGAGCGGCCAGTGACGTTAACGAAACGTCAGATGAAACGGCAAAT GAGGCGCGTCAAAATAGGTGCTGACATTGCAATTTTATTGAAAGAAATTG ACGAACAAAAAGTTGAACATGGGAAATACGGAACTTTGGAAGAGCAACAC AGAGATTATTGATGGTTTTTGTTTGTTTGTCTAATTGCGTGGAAGATATC GTGTCAAAGTGAACTCTTCACATTAAAATGTTCCACCATGTAAAATGAAA CTCTTGTGCAATCGTATGTAGAAAGCAAAAAACATTTGAAATACGTCGAG ATAATACGATATAATAACGATGTTTGCTACACATAAAGTTTGTCCGGAAA AAAGGCACGTAGATGAAATGAGCTAAAATCCTCAAATAAGTTTTTAAGAC GTAGCGTAACTGGAAGCTGGATAGGTGTTTCGCTCCCCGCTAAGCATGCG ATCCCCCAGGTTGCAAATAAAGGCGATAGACCCTCTTACTCCTGCTTCTC CCGATAGCCACATACTATGGCCTAATTACTCATCTTTTTTTCAAAGCTCA TTTATTACCTTGGAAATTGAATATTGCATTGAATAAGCAAAAAATTCCAT TATTAATTATTGATTATTTATATTGATTATTCTAAAATCTGTTCTGCTTT TTTCCGGACGCACTGTATGGATGTGACTTCTGATGGATGATACAAAAGAA AGAATGGCGAACAATATTTCTTTGTTTCAAGTATTTAAAAACTGGCGAGA TTATTAACCACTCATAATTTTTTGTCACATTTTTGGTATATTGTTTTACA TAGTCTAGTCGTCCAACTGAAGAGAACTTCGTACACAAATACGAATAGAA GTTGGATTATTTTCCCTGTACCTTATCGAGTCATGATTTGATTTCCCCTT AGTTCCGTTTTAAAGTTTCATATATGAAGGTTTTTAAAGATCTTAACTTT TTCTCCTTATCAGTACACAAAATTCCAAACATTAAGCATGACTACTTTCT CTTGGAGACAATTGGATTATCTTTGTAACGCGAGGTCCGTACTGTAGAAT GAGTACTTTAATGGGATAAACTTTCGTGGGGATTAAATTTCGCGGATTTC GCGGATTTGGGTGTCATCCGCGAAAATCCGCGAAATTAAGTCCCAATGGA AATTTGGAATGGGCTCCGCGAAATATTTCTAAACAAAACTCAAAATAAAT GTCTAATAAATACTATTTCAATGGCTACTTGCATGAAAGAAGCGCAAATA AAGCGTATTTCAACAACCAACATGCATTATTTGACAGTAAAAGTCACGAA ATCGTGAAAATATTGCCACCCAATAGTGTCACCCGCGAAATTAAGTCTCC ACAAAATTTTTGAATTTCGAGGATATGCCCAACCGCGAAATTTAATCCCT GCGAAAGTTTATCCCATTAATACCTAATTACAATAGTTCATAAACATAGA CAAATATAAATCATATATAAACTATACATGACAAATTTAGACAATCATAT GATGACAGATATACTAAAAAGATAAATTAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016485TCONS_00016485Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016485-proteinTCONS_00016485-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000240supercontigsc0000240:68941..78822 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.56 6.49 4.61 4.83 16.76 13.38 15.9 17.89 10.93 12.15 9.68 8.33 8.59 8.22 9.09 10.17 12.84 13.61 7.88 9.61 10.98 11.39 15.72 16.99 11.07 11.48 25.91 20.09 20.9 21.57