XLOC_009201 (gene) - C. hemisphaerica

Overview
NameXLOC_009201
Unique NameXLOC_009201
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000240:203401..209140+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009201 ID=XLOC_009201|Name=XLOC_009201|organism=Clytia hemisphaerica|type=gene|length=5740bp|location=Sequence derived from alignment at sc0000240:203401..209140+ (Clytia hemisphaerica)
ttatagCAAACTACTAGaattgacaaataaaaaatttggtaACAAACAAT GTACAGCGATAGTTATGATGAAGATGACGATGCACCATATGGTATGATGT TTCAATATatctaaaatttctttttcatttgtttttctttcttggtTTAC GCTATCCTGCTTGATTTAAAAACTACTAGAATTTTAGACGACATCATTAG AGTCATTAAAATATATTCCGAAGTGGatgaattgacaaaaataatcttta aagaTATAAAGATcttgaaaatctttattttttagatGATGTACCAGTCT CCTTGGTACCATGTTCAAATTGTGGTCGAAAATTCAATTCAGATAGTTTG GTAAGTCAAAGCGTTAGACGTTATGGTAAGctcaaaaagtttttaagaaa taagtGACAGCTATTTTCAACTCTAATAGAACGACGCTATATGCAAAGAT ATAAATTGATATAAGATTGATGATTTAATAGGGAATGAGACTGAAATAAC AGATAGCAAAAGGAGAATTGCAATCGATCGTACTCTTTCTGACATTGACT CATCCATACGATATCttttccaaaattcaaatcatcTTTTTAATTCAAAC TTCCCTCGGTTCATCTCAGGCGCGGCACGAGAATGTTTGCAGCAACCTGA AGCCGCGAAAAGTTTTCGATTCCAGCAAACAAAGAACTGAAGGTTTGGAG AAGCCGAAAGTCACAAGATCAGACCCTCCAAAGAAGGTTTACATGAAAAT TAATTGTATCATTTGAACAAAATATCTGATAAATGACGCATGGAATATTT CTTATCAActactttaagggaagaaactGTCGTGGAACGAAACTTTTGGG ATTTTTGTAAATGTTAGGCTTATTTACAAACATAAATTTCTGAGCAACTA GCGTCTGCTTATTGAATTATAATGTATGTTCGACAAGAAAGCAATAAGTA TGACGTTTCTGGTTTTTCGATGTTGCTAATTCCAATACTATAATAAATTT CTGACCTTGAATCGAGGccgttttattttgttatgaGCTTTCCTTTTAAA GATTGATGCTTGTTTGATggtatttttttgttgaaattgaagctttctgt ttttttttcaggcacCGAGGAAGAAAGATTGGCGAAGACAACATGATGAA TTTATTAAGAACATTCGAGCGGCACGCGGTGTGAAAAAGGCTCTCGAGAC GGGTGGTGAATTACCGCCTCCGCCCGAACCCTCTTACAACCCTGACTATG TACAGTGTCAACACTGTAACAGAAGGTTCAACGAAAGTGCAGCTGAAAGA CACATCAAATTCTGCAAGGAACAAAAATCACGCCTTCCAAAAGCTCCCTC AGACTCAAAGTTTTCACAGAAATCAGAGAAACAGAAAATCAGAACACAGG tataattttagtttttatttcagtttttctACTTTAAAATGACATTGATT GCGCCCTGTACACCCTCTTCATATCATCCAACTTTCAGGAACAATGATTG TTTGTCTTCTTTTTCACGAATTTCGCTCTTTGTGTTACAATGAAGTGAAT GCAGTCGCTATGATGTtctcttctgaccagccaccagaaccgttggagtC TTATTTTCTGAAACCTTATGTCCATTAATCAATGAATTtgatttctcttt tttagtaCAGACCACCGGTTCCAGGACAGAAGAAGAGTAGCACGTCATCA CCTGCCAAACCTCGTGGTTCCGCCTCTGACAGTATGTCTTTTTTCATCAT TCTAATTCTCttttgttttacaaaatttgttaaaatcttAATATAAATTT AAGTATTACAAGCGGGATAAAAAATATTGTATAAACTTTTAGTTCGCACG AACTAGTCATTCCCTGCAATAACTTTTTGCTTTTCAATCTTCTCTTTTAA GTGCGTTCACCAGCTGTTAAGAAAGGAAGTGCTACCAAAGTTAAAAAGGG TAAGTAGTATTCTTTTGACCGACCCGACTGACTTGACAGCAAAAATAAGT AAccacagtggagtctccataactcgaacacgcacgggcaacacaaattg ttcgagttaaggaaatttcgaattatggagTAATGTTTATAAAGCTTTGT TTACTCGTGAAGGTAAttaagatatagatggagagaaaacgtctcggtaa tgacctaaatgatcgttgaaatcttttataaatctattcaaactcaaagc ggcttttctttgatgtaccatcattggaaacaaaaaaatccgaaatgtaa attcataagaacagaagtgagaatgttatcctgattgaaataaacatttt acagtatgtggcccccaaaacggcgatcaaatttgaaatttctctcaaat ctagaggaaaagagattttacaaaaatttttgctgcatgaaaacctttaa catctctactttatttcctggaagttctttttcaaaattttcaatttcaa caatatttttcaatcccTCAAAGAtgggtagcttttttctaatggccccc aaaacggaggtttgaaattttagcgatttctcaagatatctttaagatat gaataccaaattttgaccatagttttgaaatatgatttagagggttttgg gcataaatttatttgataaaatctttacagtatacccctggttgtcaaaa tgcaggtttggggcccctaaaacggaggtgtagttaaaatcaaattatta agccgagtggtaatagggggggaaactatgaacatatttgtgttttccct taaatttacgacccgatggatgtaaaatttatgatttttaggaaatattt caagattttcgatattgcaaagtccaaattgaaaatttagaaattttcaa aatgacaattttgatttaccaACGTCttgatcaagtttttgaaaacaaat ctcttttgaaaatagttccattcatgtatggaataagctgtgaaaatttt agaaaaaaatcttaactgaaactgaaaatattaagctttaaagatatttt tctcctatattttgccgtttttgctgattcagcgaaaaattttatgtata atgttaattttttgctaTAAACTACTAACTCAaagtgataggaatagaat tccaagattttttgctttttctcatatttagaattttcggttttgtcaat gNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNATTCTAGGGCTCCAagatactggttgaccttcaagatgctat atcttttacccatcctctaaagtcacagatgtatttgcattttctgaaca gcattaggtgtagaaagtttcctataccccgttttcataacttattttca atatccaagaaGCTAGaatgagttatatgcaatttttatctaattttggt gttaaaatatttcctttagacgcaaatatgttattttgaatccgtctcaa accagcaaaaacatgctcatttttaagtataaccatcattctttcaaaag aaacaaaaatcgtttaattctgataaatctacaagtcagaatcttcatgt taatgaaaacctccgttttgggggccgtctccgttttgggggccatatac tgtatgcagaaagttcttgttcaaacgcgatacaaaataattttctcaaa gtaaggttacaatagttctatgatttcatatcCATGTATTTTTGGGCGAA CACTGTGcaaattttgagagtttcagcacatgttccttgaaaatttcttc atatAAATCTTTACGTCTGGAAGGGAGGGGactttcaaattctgatggat gattaattaaaatttatcgatgattttatgagaggggacccttagaaata taggattttgtgcttgttacggcaagctttttcttattttgatcaacaaa gctattatctcacaatagagttttttattaacttaaatattcccatgagT GCGCACAAAATTGATCACTTTTTCCACTGCAATCAAGGAgccgtttgctt ccgatgattaggaacaatgaaataaaaggagttcatttcttattacctcc atggtttACTGAAGGGTCCGAgaaattgttcgagttaaggagacatttga gctATAGAGGTTTGGGTTGAAGAGGTTCTACTGTGTATGTTATACCATGC TATATTCTGACGAAATAGTCAAAGTCTAGATCGAAGACTTTCTTGCGAAC GATATGTcgattcattttttacaaagttggttgttttgttttgtttagtt GAAGATGATGAGCGACCTATCCCACAAACCAATGGACGTTACAATCAGAA AGATTATACAGATTCCCCCTCCACTGCTAAAAGTAAACACAACAAAAATA CGTAAGAAGCCCTAAGCTATTTCATTGAGACTTCCGGTTCGCGGTGCCTG CATCGTGTTGATAATAAACGTGTTTTCAATACTTATTTCTGCCTTTTCTG CCGCGCTTTTCCGATTGGGTAACTTTAGTCTTAAATTTGGTGACTCACAg ctaaatgaaataaattttctCTAACAAAACCTTTATTTGAAGAATGATTT TTGAAGTATAATGATATTCAAATCATGAAAGTTTTCTCACCAAGTCAAGT TCTACTAAATGCTCCAGAATGCTCGGTTCTTTGCTGTTTCTAAAAAGGGT AACTTGTTTGATTCTAGCGTTCCCATCATTACAAgaacatatttcaaaaa aatgtctttctcTTTTAGCGATCCAGATTGGATGGTAGACTTGAAACGAG GAAGTTCCGCCAAGAAAACGTCCGCAAAAAGTCAACGCAGTGGCCATAAC CTCAACGATAACGATTCTGGTGTCGACATTAACGAAAATAACGATCGAAG GAGGAGAACTGCTGAACGCGAAGCAGATCTCTTCGGTCAGAAGAAAGACC GACATCCAAGTGCTGGTCGTCGTGTCACTTCATCAAACAAAGGTTCATCC AACAAGCTGGCCAATTTTTGCCATGACTGTGGAACGAAATATCCGGTGGT GGAAGCCAAATTTTGTTGTGAATGCGGACTACGAAGGATGGCCATTACGT GATTATGCATGCCATGTTATCTTTTCTTGCACTCTTGAAATCACGCACCT GCATGTCTTGTCGATAACGGACACGTGGTACGCTAAACCTTTGGTATTAA GATGAGGGAACTCTTAGGGTTGAAATCAGAAGGCATTATCACCACTCTAA TATAAAGCAAAGTTTTTATATGTTTAATCATATAGAAATCAGGGAACCGT TCATGCTTAAAAAATTGCCTATATTCTAATGCCGAAGGGCAAATTATTCA GTTCCTGTGTCTAGAGAGACCATTCATTCGGACAAAAGgtcctttaaaaa attttttttcacccaaattgGAAATTTTTCGACAAGATGATCTTAgtatt ctttctttttgaatttttacttcTGAGCTTTAAAAAGAAGATCTCTCAAA TGGTGAAATCCAAAGAAACATTTTTCTAGTCAATATTCCAGATTGAAAAT CAGTACATAGACCATAGACAGAATCGATTATTCTTTGACTGGGTGTGTGA ATTGTTACACCTAATTAAACGATCTTTTggtaaaaatagttttttggtgt cacgtaaagtttttttaagaaccatGTAAAATGTTTGTATATAAAGTAAt ccattttaaataaaatatataattttaatgTGTAGAAAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016474TCONS_00016474Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016474-proteinTCONS_00016474-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000240supercontigsc0000240:203401..209140 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ZC2HC1APREDICTED: zinc finger C2HC domain-containing protein 1A isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.35 8.7 42.16 46.39 51.02 39.68 28.03 31.39 26.37 28.68 24.73 21.04 14.04 14.17 9.72 10.83 11.35 11.44 14.35 15.11 9.31 10.03 10.81 11.54 31.41 31.45 6.24 6.16 6.19 6.36