XLOC_008930 (gene) - C. hemisphaerica

Overview
NameXLOC_008930
Unique NameXLOC_008930
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000224:403295..410527+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008930 ID=XLOC_008930|Name=XLOC_008930|organism=Clytia hemisphaerica|type=gene|length=7233bp|location=Sequence derived from alignment at sc0000224:403295..410527+ (Clytia hemisphaerica)
ccgagagtatgcgATATGCTCTCCTATTGGATAAAAAACCAATTCCCctt aaaatcgaattagagagcgtcaattgtACAAACAAATAATGTATATTCTC TGTAACTCGAATAAGTACATGGactaaaatttgttcgaattatcgAAGag acttgcttataaggtcttACTTAGTCTTACATATTTCTATCTCGTCTTGT TTTTTCAGTATCGGCGTTTTATGCTGAATGCGAGAACAAAGATGTCTGCT TCAACGCTCACATATGGACCAAGTCCAAATTTCTTGGTCTATCTGTTGGT GTACACATGGCTGGCAATGGTATGTAACAGacttaacatttttttatatg aacaaactatataagaacataaggcttcgatgaccaaaattttaagaata ttataaggctttgtggactctaaaacacccaatttcttaggaaagtggac aaaaaatactcacaaaagggtgaaaaataagaacatgttaagtacatttt taggcttaaaaaactcaaaaagttaagatcaTGCTAaggattcaaatatt tttgatgttcttataaaaaaacgtgtaattaatCACATTTTCCGCCAATT TGACTAACGTCCACCGTTATACGCTTTTTGtacgaacaaactatataaaa atataaggcTTCAATATGGTCCGTTGCTCATAAAGCATTTTCAGAGGTTC GGAATGGAAGTGCATGTCGGCGATGTACGAAACCCAAACAAGCCTTCGAA AACTGAATATGCCCAAGGACGCTCTACACAACCCCTGAATCTTTTGATAA CACAAATCTTGAGCCCATCCGCCTAGATGACAACTGTTTCTTACCGGTCG TCGATCAGTTTTGCTACCTTGGCACAATACTCTCGAGGAACTGTACTGAT GAAGCGGATGTAAATAATAGAATACGCAAGGCCAGTAACGCATTCGGAGC TTTACGTAAGAGTGTCCTGTCCAACTCACACATATCTCTATTCGCCGAAA GTTCTGTTTACGAAGGGCTTATCTTACCAATCCTCTTATAAGGATCTGAA TCGTGGTgtctaactgaaaaattgtttAACCTTCTACGCGTATTCCACCG ACGATGTGTTCGATCGATGTGTGGTGTTACAATGAAACATGTTTTCGAGT TCCGTTTAACTAATGATGAGTTATTACATAAGTAAAGTCTTTTATCGATT GATAGTTATGTTTACAAACGGCAGCTCCGATGGCTTGGCCACGTTACACG TATGAAATATGATCGTTTACCTCGTAAAATGTTGACGTCTTGAGTCTGTT CCAAAAGGCCAAAAAGAGCCCCTGAATTCACTTATGGTCGGGgtattttc aaatgtttgaaaaagtgtGAAATTGAGAAAAGTAATTGGTTTTATTATGC CTTGGATCGAATGAAATGGAATGGATTGANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNGAATGGATTGATTGCTAATGTATA GAGTTTATTTCTCTAGtttttacttgaatttctttttcatgtctAGCGCT ATGATTTTCCTaggacataattttttattatttcttagGCCAATTTCCCT TGCAGAGATGGTacatctctctctctctttctctctttctcttcaatatg gtcaaaatgttaagaacaagttaaggctAAGGCTTTGCACAATCTAATTT ATCAGTAACTTGcgcaaaaatattcacaaaatgctATAATTAAGAACata gtaagaacatttttaggcttaaaactctgTCACACAACGGtgtttcgcca ttttttgacaTTGTAAatattagataaacgttgaaactaTGTTATGCGCC AGCTGGGTATTCTATGGAAACCATGGCGCTCTAAATCCATTAGAACGTCA TGATGGAAACAAAAATTCCGGAAATTTTACTGGAACCCGCTCGCTGTCTT TTGGGTAAAATCTAGACCTGCGACataattagtttgttttgccaTCAATG GGTTGTTTTTTTCGAATTGTGAAGTGAAAAAACCTTGAACTTTctgtatt ttgtattttgtaggCAATGTTTTCGTATCGAAATGGGACGAGGAATATAT CATGACGTTCCCAAACGCTTACGGAAGGTAAGAAGTGACAACGTTTGCAT GAATTTTCTCGACGGCCGCGGGGACGCGCCCATTAGACCTTGTTCGAAAT CATTTTTTGACAATTATTTGAACTGTTCTAGACAAAATTCGGACCCtgaa taataaaatttaagactGTAACAGACAAAATTTGTACCCTTTTTTTACGC AAAGTCTGATACATTTTCCAGAGGACATTGGTAATGGCCCGTCCTGATAT CTATCTTTGTCTCAGTGaacccaacccccccccccccgggtttaaaactt tttgttgttttttttcaggtcttatttcaaaaaaatgttaatcTTCTTTT CATTTAGATCGATTTTAACAGTACCATGGGTAGAGTTGGGCGGTAAAACG GAGATCACGTGTCCAACAACTGGTTTCAGCGCCCAAATTGAATTCTTAAC AAAagtatgaaatatttcaaatcaacAGATTCCACAACTGGAATTTTCGC GGAACAGATTTTCGCGGTTTTTGGACAAATCtgtaaaaatttcttccctt aaggtacctcCCATAACAATCGAatctcaaatttaaaaaaagatttgact GCGTGTAATTTGCATGAAATAGATAGATTTATTACTAAACTAAAACATTC AGTTCGGGAAATTGCATAGAATGACAGCGATGTCAACTGATGTCAAATAT CGCAGCTTTTTTGCTGCCTTTGAACCAAGAACGGGGTTGCAGGGTCACGA ACGGGGTTCCAAAATCATCATGTTCATTTTGTAGACCAATCCAAAAGTAG ACTTCTCACCCTAGGATACTAATTTCCTACCTAGGGATTTTTGTGTTGTT GGTACACTTTTTGttgctcaaaatttaataatctATCTATCTAAGGGCAT AGATCTATCTGTTGACttttcgtttttcaaaaataatcttttacttttca aacattttttttaagataagATAAGACAAAAAGAGGTAAAAGAGATAAAA TAATACACCCCGACAAGACTAGAGGTTTCATATAATATCCCTTTCGTTTT AGCCATTTTATGGAGGGAAAAAGAATATACTAAGAGCTGAAGTATAGTAA GTAATTTTCCTTTCATTTCATGGTCAAATAATACGTGTTATATAGTAATA TAAGTGTTATATGATAATGTGGCAAATGTAACAGGATATTGTTTGAGTAT AATGTTCTTCAGTTTTACTCATAAAACTCTACTTTTTATTTAATggtata ctttaggcgtattTCCTCAAATtcacgaaagtaaatgtcgaaatgcgatt tttcgacctcgcgaaagtttgtacgcctaaagcatATTCATTCAACTTGT TAAACtgttaaaaataataaattttcaagGTGTAAAAAAGGTGCCCTTAC CGTTCACACATGCCCTCCGGTACTGGGTATGCCCGCTCACCCGGGAATTC AACCCTTttcagtgttaaaagttcttccgtctaaGAGGGATTTTGTCGAA GTATATAAATACAggcttttccgtctcaaaattctgtatgatttaccaaa attatcaaaaataaacgCTAGTTTGTCGTGTAAAATCTATTTTCCGTCTC AGATGTAAACCTTACTTTTCATCCCCAAAATTGTCAATAGTTTTCAAGAC GTTAATGTTTTGTTTCCACTTATAGCGCACCTTCGCAAAAGAAACCTTTT CTGACGGTCAACGGCCCTTGGAACGGCGTTATGCATGCAAAACGAGCAAA TTCTTCGGTAAGTCAGCTCTCAAGAGATGTATTTTTCGTCTGAAAGTTCT CCACTCAATTTTCTCTTGAATGTTTGTGAACAAAAAGTAGAATCTGTaat ctttttctattttgttattgttgttgttctCTATAGTAGGGGGGGGGGAT AATCCTTATGATATGTAGCATCTTTCGTGGGACTCAACCGCATGTGATTG GTTTGAAAGTAGATAGGATTTTGAAACTAATTTGAGAGAGGACCCGTGGA TTAGGCATGGCAAAATTTGTTATAGCCAAAAAACTTACGTTGTAAACGTT GCAAACGTATTTCGGTATAGCAGACCCTGTAACCGCTTAACTTTTAGCAT TAATTTTTATATGGTagctttgtattttttatatgtAATCCATAACGATA CAGGGAGGTTTCAAGGGTCTGCTATACCGAAATACGGGCTATTTTCCCTC AAATACCGCAGCATCTGATTGGCTACCGTTCTTTTACCAGGCTATTATTT TGCAACGCGATCTATAAAAATCGGTCATCTTTACTTACAGGAAACGGAAG TCTTCGNGTTGTTATAGCCAAAAAACTGACGTTGTAAACGTTGCAAACTC CACGTTACTTGGTATTTCGGACCCTGTAACCGCTTAACGTTTAGCAATCA TTTTTATATGgtagttttgtatttttgtatatGTAATCTATAACCATACA GGGAGGTTTCAAGGGTTCTGCGATACCGAAATACGGGCTATTTTCCCTCA AATACCGCAGCATCTGATTGGCTTCCATTCTTTTACCAGGCTATTATTTT TCAACGCGATCTATAAAAATCGGTCATCTTTACTTACAGGAAACGGAAGT CTTCGTTGACACTTTTACAATGCCAATCGTcgataaaaaagtgaaaaagg ttCCCAAACAACTGGAATTTGAATCGAGGAGGTAATTTCTTACTTTCTTT TacgttcattcattcattcattcattcattcattattTAATCTCTTCCCA TTCTTGTTATTGCTACAGGTTATGGGAGATTTATTCATTCGTTAAtgcat tcattcattcatccattCATTCACTCACttgttcattcattcattcattc attattTAATATCTTCCCACTCTTGTTATTGCTGCAGGTTATGGGAGGAT GTAACGAACGCGTTGAAAATCAATGATATTGAAAATGCAACGGAAGGCAA ACATAAGGTATGTTAACGTTTCTGACCCTGCCCAGTTGGACatcgttgtt tcaacgttcacctaacgttatatggacgttgtgaacgttatatAAACGTC TAAAAAACgatgtgtgccagctgggttatagCGTAGCTTGATTTCAAATC TTATTTTACTGAAGCCACCTGAAAATTAGCCAAAttaacaaatcaaaatg ggtgcgagtcaaaactataaagatatatTAAATCTTACTGTCAGATAGAC CCGCGTAGTGCagtctatcaaaagtacacccttacagtgtatttcaAGGG TCTCGGAAAACCTACCCTTATGGGCGGCACCTGCCGTGCAGAGTCGGACC ATACGACTGATCCCCGGATTGAAAACCGCTTTGGCCTATCCAGAGGATGG GTattgtattttctttgtatttttagtCTTATCACTTCTCCAATCTCCTT TTCAATAGCTGGAAGAAAAGCAACGGCAAGATGCGCGCGTGCGGAAAGAT ACCAACACGAAGTGGGTGACGAGGGTAAGTGAAAGAACCAAGAAACAAAC TCTCGTTGTTTATTTGCTGTGTAAACCCGTGGTTAATTGCATCATTTTAA AGTCAAAAGGAGCACAACACTAGAAAAAAAAGATCAGTTATAGCAAAAAA GCCAGTTatagtaaaaaataaaacagaacAAAAAATCGGTTTAAATGAGG TACATACTGTCTGTATTAAATGTGTTCGTcagattttctaattttgttgC CCCCTTTTTCTATCCAGCTTTTCGACGAAGAAGAAATAGCTGAGGGTGAA AGACTTTTCAATTACAAATGGCCCTTGTATAAACGAAAGGGGATGAAGAA ACCGGGATCCACTTAAAAAAAATCACTGACAAGACAAAGATGCGATTGGC GAAACAAGGCCAGGCCGTTGGTCGGTTGGTCATTTGGGTAAGAAAAACTT TGGTTGAAGGTCTAGTCGAGTTTTTCGAAACAGTGGAACGTTTAAAAGCC AAAATCGATTGTAATAACTGGTTTATTCGATTGAATCGATTTAATGGGTT TTCACGAAAAAGGAGGTTCGGATGCTATTTGTTGATTGATCAAGTTGGCT TTAATTTCCCAGGTGTTGGGAAAAATAAACCATTTGTTGAAGAGTGCTGG GTAAATTGTTTCGTTGTTATGAGATTGTTGGAACACTCTGATTTCAAATC AATGAAAAACTTGacaaaatcgatttttttccaTCTCGTGATTTTTAAGT CTGTACTGAAACTgaacaaaaattaattttaaatctAACCTAGTTTCTTT ATCAAACTCAGTTACAAATTGATGTTGAGGAggcttctttttcaattttt cagtacacaatctcatttttctattttactgaccaccctggatttatACA CTCGAAAATCAGACCCCCTTCTTTTTATCTTCCTGACCACCCTGGACTTC ACACTTCCTCAACTTAGGAGGTACAGACTACAGACTATTTTGGAATAGCA CATAACTGGGCAGAATTTTACAGAATGTCTTGGACAAAATCTCAATTAGT AAATCTCAGTTTCCGTACATTTTATGATACAAAAATATGCATTTTAAAAC TCTAGCATAGGAATTTTACATTTATAGTTtaataaaagtgaaaatattac aATTACAACCAACTTGGACTCTGTGAAATGAGGaattgtgatttattttt ttcagcaatattaatttttgatagaatattttgaaatatattaaTTAAGT TTTAATAGCTTCTGTTtatacaattttctttttttgttaaaataattaga aataaactttaaataagtaaaaatttataactttttcaaaatattccatT TTACATATCCGGATGGACTAACCTAGCAAAGTCGCAGCCGTTTCAGTGCC GTAGCTACCGGAGGTGCTTCCTATGACACTGCGTTTGGAGAGCAAGTGCT ACAAACTTTACTTCTCTTTCTTATATagaacattttttagaaaaataaga acactttaagaacgATGTGGTTCTCCCTGGGCTTCAATTAAGTCCGAATT ATCCCTCCCAGTCGTTATCGTCATGGTCATCTGCTCCCTTAAGTTGATGG CAAGtctttacacccccttctcgcagAGCCGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015989TCONS_00015989Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015989-proteinTCONS_00015989-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000224supercontigsc0000224:403295..410527 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.01 9.44 2.6 1.7 37.2 27.76 29.07 32.58 21.26 27.21 22.37 17.01 16.13 16.06 13.9 18.9 17.86 17.07 13.35 16.55 18.74 18.55 19.21 19.3 48.33 36.13 9.6 8.45 18.61 17.19