XLOC_008533 (gene) - C. hemisphaerica

Overview
NameXLOC_008533
Unique NameXLOC_008533
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000208:103425..108621+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008533 ID=XLOC_008533|Name=XLOC_008533|organism=Clytia hemisphaerica|type=gene|length=5197bp|location=Sequence derived from alignment at sc0000208:103425..108621+ (Clytia hemisphaerica)
TGCAAATGAAAATAGTTAAGTTTTGTCACACAATATTGTATATCAAAATT GCATGAAGGTTGTTTATAAAAACTAAAGTCTGTGAACACAGTTTAAAAAA GTCACAAACCAGATAAAAGAGCGAGAAAGAGAACATATAGTAGAGGAAAT TCATAGTTATTAGTAAGCAGTTTATGCAGTATTTCTGTTGAAAATGCTTC GTTATGGGTTATTAATTTGCCTGCTGGCTAGCACATCTTTTGGGAAGCCA GCtgatagttttgaaaaaacttcaatTGAAATCAACAATggtgaaaatat tgaaaaatatgaatTGGAAGAAAGTAAGaacgatttttaaaaagaatagg ACTTGTAAACTATTATTGAGGCAAGGCtgtttttacttctttttttgGCT CAAGGTGTACACTACCTTAGGTGAGGCCCTTAGTTAAGGGTGCGTAATTT AGGCTttccaaagtgcactgtaagggttaaAAAGCCTTTAAGGAAGTGTG ACCATTTCTGCACGAAAACTTGTACAAATTTGATTCTTTGCCGACCGGCA AAGGTCCAGTTTTGAGGCCCTGATTTACGTCTGCACATGGTAGTTCTCAA ATCGAGTCCGCCACCTTTCTTTGCCAGTTAGGCTGGCTGATCTGTAAATT TATTAAACTTGCTGCCGAGAACCCTAACAATAGGCTagataaaattttta tcaatgtttaaaataattgtattattttattttttttagttcGTGGACCT GAATCGTCGCCAATCCCATCCTATTTTTTCCAAGGGGATATGTTGATGCG TAAAGGTAAGATTTCTTGGCTTAAAATATCATTTGTTTTATGGGAACTGT TTGTAGTTTGTTGATGTAGTGACCCAAAAATCACTGAAGAATGGTGGATG GCACCTGGACAACAGTCAGTAAATAGGAAACAGTCATTTCACAAGTAAAG ACATTTCTTTTGCAGCATCATGATGAGAATCGAGTGAGAGAGAACTGTCT AAGTCCCCATGCTCTTGTTGGGAATCTGGGATTTAGGGTCAGActcagtt ccagtccctaaaggCATAGGTAAACGAGGAAAATAAACAAATGACAAAGG GCAAAAAAACACAGAAGGGAACGATGACTCTGACTCCTTGACCCAAATTC TGTTCTGTAAAATAAATTTAGGTGTATATTAGATTTCGATGAATTGACCA GGAGAAGCCACCTAGTCCATCCTCGGGCGTTTTAAATTCAAAGATTACAA GACTCTTGACCTTTTatatgtttttgttgattttaaaggTACGCTCGCTA AAGCGTTAGAAGGAAAAGATGTGACAAAGGAGGACAACAGAGCATGCGCG AATCCACCATGTGCAGCCGCTGCTGGTTTTATCGCAAGTAGTTTGGCGAA ATGGCCCAATCCTCGACGAATCCCTTACGTCATGAGTAAGAGCGCAAGTA AGTTGACTGGAATTTAATCAAATCATCTCagctttaaaaaaagtaaaaat attataGTATAAAGAGTCTAAACTTTTCGCCAGAGTCcttaagaaaatga gaaaacaaaAAGGGGGCTACCTTTTTTGGTTATTTGGCAATATttctttt tactcatttttgggGTTTAGAGTTTTGCCTGTAGCGTTATTTTTTTGCTG TTAAAAATTTGCCAGGCCTAATTCGAGAACCTCTTCTGAAGAATTCTCAA ATCCTATCCATTTTTGAACTAACCATGTGCGGTTGCATTCGAAAAAACAT GTCATTGTTTCCAATGATTTTTGATTCCCGGACAATCCCCCCCTGGTGAA TCCCCCCCGGTGAACCCCCCCCTCCTGGTGAACtaaaaaatcatgtaatt tGAAATTAGCGATTTTACTATTTATCTTATAAAAATCTGTGTAGACGACT ATcatgtaaaaatctttcagAGCTTTTCTCTGAATCAAAAAAATGGCCGT TGTGATTCTTAATAAACTTTGTAGACTATCATGTAAAAATCCTTGACCCT AAAATTGGAGGTTTGTTtcgattgaaagttttaaattagtctctctaagg gtcggaaaatttaggatttttaggaaattttttgatttccagagaaaaaa ttgtaataaagtctcatAATAAAAGGGcatgacttttttcaaagatctaa aaaaaaattcaaaaagtctctctaagggtcaccttttcagcaaaaatcag tctctctaagggtcggttttcggagggcccgtccgcacatacctctcatt caccaaccctagtacccccccccggggttacaGTCCATGATTTGGAAATT TAAAAacacatatgaaaatatatgggtgggaattcaccagggggaaattc accgggtgggaattttccggggggaattcaccaggggggaatttacTGGG GGGGATTCaccggggggaattcaccagggggggaattgtccggacACCGT TTCCAACGAAGATTGGTctatattttaattttcttcaGCAGAAAAGGTGA AATACTCAAATATGACTTTAAAGTCTCTCTTTTAATTATCAAGGTGACAT TTACGATTTCAAGTCAGTTTTCTCCTCTCTAATGACTGCTTCTACACCAT CACTTGAAATCAAGAAGAATGATCAAATCCTTGGTCATAACTATACGGTA gccgaaaaatatcaaaatgattCTCCTTTCTTTATTTCAGAGTGTAGCGT TTTCGGTCGTATCAGTCATTTCTTTAAATCCTTATTCGACAAATCGAAGA AATGTCATGAAACAGCCATTCGAGATGGCATCAAGGAATGggaaagaaaa acgtgtattcgtTTTGTGGAGATTGATTCTGACGATGCTTCTAAGGAGGA TGGTTATATTGAATTCACCAGTGGCAAGAAACGACAGTAAGCTCTACAGT TAAGCCTTCTACCGTTCCGAAAAAAATGAAGCCGTTCTATTAGTCCAGTT TGATTCTTATGTCACTTTTAACCAATGGAATAGCTTAATTCCGTTTCGGT ACGAAACCGTTATCTTGTGAACATAGAATTAGACAGTACTGTTCCGAAAC AAAGTTCAGCCAAATCTCTCCTAAATTTAATTGGAAAGTATTAATAAACT CTTATCTTAAAGTGAATTTGTTGGGATGAATAACTCTTTTCTAACCCTCC TCTAAATCCGCTAATGTAAATACATCACCTACATCATTCAAATCCACTGA CAATCAGTAGACTCTAGATGAAAAAAAAGGTTGTCTACTATTTTTagcat tcgagttatagaggttcgagttaaagagactacactattcatgatatgca ccattgcaatgtcttctgatattacatcacggacccagcagctgattggt tgtaagtgacgtaaaatcaatcaatacgtcattttcaaccaatcagctgt tggatccgtggaagacattgcaatggtgcatatcatgaatattaatCTTA TTTTTGTAGATGTTACGCACACGTAGGCTTTATCGGTGGTCGTCAGGTGG TCAATATCGATGATGGATGTAGCACTACAGGGATCGTCCTTCACGAACTT GGACACGCTTTGGGACTCCATCATGAGCAAAGTCGACCAGATAGGGATTC CTATGTCAGGATAtacaatgaaaacattaaagaAGGTTAATATGAGCAAC ATTTGTCCTTGAACATTATCACAATAACATCAGGCCGATTCCCTTGTCCC TTGTCCGAGGTTTAATTAAAAATCTTGAAGACTAAGTCGAATAGTTTTTT TTGAACATGCAAAAttatattctagagaaaaagtatAACATTTCTAATCC AACTCGAACACAGTCCTTTCGGTTCTCTTTTTTATGATTGTGGTAGCAAC TCATATGCAACGAGTAAAGTTAAAAGGTTTTCCAATAGCTTTGGGTTTCT GATGTATTTTCatcaaaactttctttcttcAGGGACAGAATTGAATTTCA AGAAATATTCATTCTCTGAAGTTAACGCAGTCGGTAAGCAAACTCTCTCC AATATTTCTGATGTTACAACGTTTTTTTACGTGTTATCAGGCGATATGGA CTATTATCAACATTACCCTGTCTTTCATGATTCCATAGGCTGGTTTAGAc ctttgagtttaaagcccgaagggctagagtagaagcTCTAACCTttttca ggcaagaaaaagtgaagccttaaaaaatgcgccgtatctttgacgacaga ttgaatctagcaattccttggTTTactttacgattgatatttttttcgaa atttagtggtaagttttagtttcaatctgtcatttgtgtaaaaaccaggc gagccgctcaagaccgcgtaactttggtaggatttgttggcttcaaatcc taccaaggagattctattctagcccttcgggcttatacttcattggttta GACCATGTCAAACTTATCAGATGAAgaaatttgtaattgtaatttcattg tcttttaacgagcgttgcactcattcgcatgtttccgacgcacttgctct attgtcttagaTTCGCCAGTGTTTTTAGTGTCTCATCCTTTCGTCGAGAT GgaaattctatcaaaatcccCAGCTCACCAACCAAATCAATTGGAACTGA ATATCCTATTTGCTATACAATCTTATCAAGTGAAAAATCATCTGGAAACT TTAACCCCACTGGGAGGGTGCCCtaaaattttatccccattaTAATTGAA AGGAAAAAGTTGCAGTTCACTGGGGTTTTTGAGCTGGTaatgatacaccc ccttctcacagacctggtaagAGTAAGaataatggactgaaactcgaaac aggtttttttcaaCCCTTCTAGAGCGAATAGAGATACATCTAaacaatca aatttttcaattttaggaaCGCCCTATGATTATGGATCAATCATGCACTA TAATCTTTattcattttccaaaaataaacgCAAGACGTTAGATGCTATTC GTCCGGTACCGAGTGGAACCGACATCGGCCAACGtaaatatttgagtaaa tatGATATCCAAGCTGTCAAGAACTATTATGGCTGCTAAAAAGAATCAAT TGCCACTTTAATATATACAGTATGATATAAAATAAAGGATTGTATTCTTG TATTCGCCttattttgatgaatttaatGGAGGACTAgtttaataaagaaa aatgagttACTGGTTTATCAAAGTTTCATGTCTTCTAGAGTTTTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015258TCONS_00015258Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015258-proteinTCONS_00015258-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000208supercontigsc0000208:103425..108621 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.18 6.49 3.97 3.74 1.09 1.56 118.27 126.11 164.12 144.16 231.58 124.47 43.91 43.54 20.09 14.64 96.61 86.56 114.56 200.65 280.69 276.55 245.52 265.41 167.1 192.18 87.15 93.38 1596.79 1495.91