XLOC_008353 (gene) - C. hemisphaerica

Overview
NameXLOC_008353
Unique NameXLOC_008353
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000201:315835..320886+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008353 ID=XLOC_008353|Name=XLOC_008353|organism=Clytia hemisphaerica|type=gene|length=5052bp|location=Sequence derived from alignment at sc0000201:315835..320886+ (Clytia hemisphaerica)
CCGTCATGCAGCGCGTTGTACAGAAGTAGAATTTGACTACAGTTTCGAGA GAATAAGTTTATAATAATATACGCATACATATACAAAGTGTACTTTTACT GAAGCTACTTGGCAAACTATTTTGCCATTAACCCATCACCTTCTTGTCTT CCAGAtagtaaacaaaaacaaacagaaacaaCTCCATCTGTCAAAACCGC TACCTCCAGGATGCATCCAGCCATCCAACTACTCTTCGTCACTCTCCTAC CATACCTTGCTCTAGCCACAGTCGAATATGATAGGGATGGAGGCTACATC ATTGGTGCCATCTTACCATTAACTATAAATGGCCCAGATGGAAAATGCTC TACTCTGAATCCTGAAGGTAAAGATTCAATTTAATGATTGATTAACAATT TGTGAGTAAATAAAAGCTTTTGCTGCCTTTTGGTTCTACATAATGAACAA CGATCATAACATGGCAAGTAGAATAATGTGTCAGTCTCAGTATTCAGTGT CACAAGCATTTTCCAAATTTCGTGGCCATTGCAGAACAAGCTGAAACCAG TAAAACCAGCGAAAAAAATCCACAAGagtttcctttgttaatatgcCCTG CAAACTCTTTGAAATCCATGAAAGATTCCACAATCTTTATGGTGGGCTAA CTTTTTTCCTGCGGTAACTTCCTTACCAAAGCCTCAGTTGCTTCATTACC AAACCCTCAGTAACTTCCTTTCTAAACCATCAATTGCTTTCTTACTAAAG CCTCAGTTAATTCCTTTAAATTATACTAACGCAATCAATTCAGGTGCTGC ACACGCGGAAGCCATCAAACTCGCAGTGGATCAGATTTCTGCATCCTCCA GATTCACCAGTCTCATTTCGTCCACCAGTATTGGATACAACATACGTGAT AGTTGTAGTGATTCAGTGGTCGAACGGAAAGTCATCTACGAATTCAACAA AGCCGCACTGGCATACGCAACAAACAACTCTGCACCCAAACCTGTGGATA TCGTCTTATCAGCTTTCAATCTGGATTCTGTGAACTCATTGAATTTATTG AATGTCGAATCCATCCCACAAATCAGCTACTCAAAGGTAAACTATACTTG TGCAAAGCCAACAGTATCCTCCACTTTGTGTTGTAAGCATGCAAGAAAAT CGGGCTGGAGCTCAATTATGTACCAGCCTAATTGtgctttaaaaaagaag aaactattATGGATATATTCTCACGGCAAGTACTGTGGATCTACCTGATA CAAAGAACAAGTGTGCTAATGTACTTATCTTGACATATCTCATAGACCGT TACGGGTTAAACGTACTTTTCTTGACATATCTCATGGACCTTTACGGGTT AAATGTAAATAAGAGGAACGGTTATTCTTTCCTTATTACTTACAACTTTC TCTCTTCATAACAGGATAACGCTAaattgatgcaagtaaccagtGCACAA GGATTAGCAGTCCAAAACTTGATCAGTGTTTACCCTGAGAATACAATGGC TGTACAAGTGGTGATCGACCTTATCAACGAATTAAACTTACAATACGTTC ACGCTATCTTCTCCGATGACTACCAGGGAAAACAAGCATCCAAATTGTTG ACCGATTCTTTGAAAACCAGCCAGAACTGTGCTGATGTTTACAATCTAGA TGACAGCAATATGGACTCTACCATTGCTACAATGAAATCAAAACCCTTGA TCAAAGTGATTGTTATGCATTGCGCAAAAGACGTCGAGaaaaaattttac caaaaacttATAGATGAGGATATGTCcgattatatcattttttccACTCA AGACTGGAGCAAAGAAGGGGATTCCCTGGTACCATACAGCGACNgattat atcattttttccACTCAAGACTGGAGCAAAGAAGGGGATTCCCTGGCACC ATACAGCGACGTTACTCAAGGAATGATCTACATTCACCCAGACAGGGATA CCCTCAATTTTGAGGGTCGCATTGGAAGTGTGACCAGACCTTACACCAAT TCACCATGGTTGAAAGCTTTATATGACAGTTATGGCGGCAACACACAAGC TGAGGATAAGGTCAAAAGTGAAGTCTCCAAAGCCTCGTCGTCAGCCATTT ACAGTTATGAATCCATCTACACTATTGCTGAAGGATTACTCAAAGGACGT GATTTGTTAGAGAAAGTCAAAGGTCTTGAACTAGTCATCGAATATCTTGG ACGAAATGATTTGAGATTCAATGATCACTTGATCGCTGAGGGTACAAGGT ACGTCTTGAAGAATGTCAAGAAATCATCTTCACAAGGTGTTTTTGTTGGA TCATGGGAGAACCAACCGAACAGAGAACCATTGAGGTTGAGCAAACAAAA CATCGAGTGGAAGAACGGTAGCAAAGAAACACCAGTCTCATCGTGCAGTG AGACATGTGCATTGGGTTTTTACCGAGAATTCACAAATGATGTCATCAAA TGTTGTTGGGATTGTAAAGCTTGTCCGAACGGCACCTTCAGCAACATCAC CAACTCGAACACTTGTTTGACACCATGTGAAGGTTGTGTTGCAAAGCCAG ACAAAACAGGTGAGCGAATCATCCATGACTTCCATATTGATTCGGGAACA TTATATAGATATACTGAAACTTCATCTATATATTTAAAATTGAAAGTGCA ATTAGGGAGTTTAAAATGCACCTAACTCCTTCTCGTTTACTGAAAAAAGA CCGCggcaagatttttcaaaattataataaaaaaccaCCCGAGGGAGGAG TGGTATAGGCTAGAAGTTTATACTGAAGACATTGTTTTTTGATACGAAga taatttcattttgaagtaaTTACCTTTTTTTCATAGGATACGTCAAGTAc gaagttcaaaatttcaaatggtTTGGTCCAAAAGGCTCCTTCTTAATCTT CTTGATCGTCCTCGCCTCTTGCTTCATCTTGCTGGCTCTTGGTATCATCA GCCAAAACTCTGATCACGAACTCATCCAATTATCTGGCTACAATCTTCTG TGCTTGTATCTGATTGGTTGTTTATTGTTAACCCTTGCACCAATCCCATT GCTTGTTACACCGACAGTGAGTTCGTGTAATGGTTACATCGCAGTCATGA ACATCGGGTTGACGGTCATTTTTGCAGTGATGATGACGCGAACAAGTTAC GTCAACGACTTCTATGATGAAAACGGTAAGAAGGGAAGTTTGTTTAACGA CTCTTTGGAATTTCTTCATGTAAAAGATTCAAAAGACAAATCTCTATCCA CACTTCTTTTTATTACTCCACAGTGCCTAAAAAGGGAGTTGAATAAATGG AGGGAAGGAGTCGTATTAGAAAGGTTCAAACTTTCATTGTACTTAAGAAG CATTTTTATattgggggggctgaagtttagtgacaccaccatggtttggc ccgaggggaaaaattttgaaaatttgagctctagattgcttgaaaatgca ctcaaaataaaatattttcgagaaaaaacaacataaaaatcaatcttTAA CATAAGATGTGTTTTAAAAGATATTATTAGCCCCCCTTGcacccccagtt gctacggcactgattAAGAAACGAGGAAGGACCTTTATTCCTTAGTCACC TGAGAGTAGCTATCAGCTAATCAAATTTCTTATCAAAAGATACTATGTAA GAAGTACTTTAAGAACATCACTTCGTTGTTTCTTACCACAGGACAAGTTG TGAAAGGTGGTTTAGGAAAACATCCACGTTTCATTATCATCATGACACTC ATCTTCATCCAAGCTCTCATCCTCATCATCGTCAACAACCTGTACCCACC GCAAACAATGCACAGCGCCACCGATAATTACGCCGTAAAATACGCCGAAT GTTCCAGCTGGGCTTCCTGGGGATTCTGGGTAGCTTTCTCCTTCAACATT GCTTTATCGTTGATCGGTAACTTCATGTCGTGCTCTTCCACCAAGATGGA GGACATCTGTGAAGAACTTAAATGGTTGCTTATCACTTATTTGATCTTCT ACATGAATGGTTTAGCTGAAGTTATCATCTTCTACCGTGTCCGAAACGAG CAATTAGCTGTCGGACAAGCAGTCATGTGCATTCTCATGGCCAtgtcttt ctattttttcttcatCTGGCCCAAAGTATGGTACGTTTTGTTCAAATCTA AAGATGGGAAGATTCAGCGATCACCAGAACCCATTCCCCAAGACGACGAT CACATGACTACAGCCATCCATAGTTCAGACGCTTTCAAACAACATGGCGT TGTGCAGATGAGATTGAAACAAAATGACGCTGAAGCCTAAATAGAACGGA TGGTGAACGAATAAATAATGTTCCTTGCTGGACATACTGAGTGCTTTCTA ATGACGAAGCTCATAGATTGATGTTCAGAAGAATGACGAGGTCAGTTTAG GTCAAAGAAGACCACCACGTGAGAGAACATTAAACAAACAAGTAAACAAA TGAACATACCTAACAATTACCGTCCAAACAACATCTTTTGGATTGTCTTT TAACGTTAATGTCTGAGTAATGTGTTCTTTTAGCTTtaactgaaataaaa aattaatgttgagttttttagtgatttgaCCAGAGGGGGATTTCATGAAA AGATCCAAGGCAGTCCAAAGATTACAGTGTCAGAATATCTTTTCCATGAA GAATTGCCAGGTCAAGCTAATAcaagaaaaattcttaaaaaccaTTCTAG AAAGACAATTCAAAAATAGTATGACGAAAGGAAAAAACTTTTAGGACATT TATACAAAAGATGAACAtattatacatatttttttccCAACAGAAATGAA AGTTTGTTCCAAAAGCTATGATCGCATTAATTTATAACCCTGTGTTTCAA ATTTCTCAACATGACAAAGCTTTTCGAACAGACTTTAAAAGAATTTAAGA gaatttttgtaatattttttacattataataattataattttatttacaa GATGTATAGTCCTTTTTATAGATAATGACTGTAACACTTTTAAACTCTCT CCTAATGTGCTTACGCGTTTAAACATTtagttttcaaactttttgtgaTT TC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014938TCONS_00014938Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014938-proteinTCONS_00014938-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000201supercontigsc0000201:315835..320886 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.25 0.24 0.13 0.14 0.17 0.11 0.15 0.21 0.22 0.11 0.15 0.22 30.6 34.29 6.25 8.76 351.39 440.79 58.34 52.81 213.34 213.2 53.7 65.55 100.89 83.44 2.2 1.04 0.08 0.1