XLOC_008285 (gene) - C. hemisphaerica

Overview
NameXLOC_008285
Unique NameXLOC_008285
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000198:392041..396183-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008285 ID=XLOC_008285|Name=XLOC_008285|organism=Clytia hemisphaerica|type=gene|length=4143bp|location=Sequence derived from alignment at sc0000198:392041..396183- (Clytia hemisphaerica)
ATGACACGACAATTCGAGGAAGAAAAACAACAATTGGAATTCAAGTTTGA
TTCACAAAAAAATACAATGGTTGAAATCATCAAGAGATTATTGAAGCACA
TGATGGTGTTAAAGAAACAAAGAGAAAGGTGAGAGAAAAGGATGGGTTCT
ACTTAATAGCGAGTTTTATGCATCTAACCATTTGAGTACGGAGGAATGAC
TGANGTTGATAGCGAGTTTATGCATTTAACCATTTGAGTACGGAGGAATG
ACTGAGAGGATTTGAAACAAGCTGTAGTTTTGACCCAAAAAATCTCAGCC
AGTCAGCATCTAGAAAAATTAAAAAACTATACTCCGTTGCAGAAAACACA
GCATAAATATATCGCAAAGAGGATGTAAATTAACACCATTGTTTTATTAC
TTTCTCAGTTTCAGGGCTAGGGTTTCTAAGTAGGCTAAGACTTTCGATCA
ATTTTCAGGGCTTTAGAACTTTAGCAATTGTATAAGTTTTCACCCATCAT
TTTTGTTTGTAGGTTACGAAAAAGTTACGAGGGTGAGCTGCATGATTTGG
AAGAGAGATTGGAGAGCGAGAAAGAATACTTGATCGAGAAAGCTGGTAAC
GAAAAACCCACACGTGACATCGGGCCCATATCAACCAATGAGAAAAGCGA
CACTTGGAAACCAACCAATCAGAATAAAGACATGTGGAAATCTAAACCAA
TCATAAATCAGCAATTCAGTGTAAACAAAGGAAATGACGTCACACAACAA
AGTGAAAGTGAAAGTAGTTCAAATTGTTCGCAAACGTTAACATTGACAGA
ATTACGTGAATTGTTTTATAATATGAGCGAATTCGAAGGAATTGTCAATT
CATCTTACGAAGAAGAAAAAGACTATCTTCAGAAGAATATGAAAGAACAG
TATGAGAACAAATTGAGAATAGAAACTGACTTTTTAATGAAACGTTTATT
AGAATTATCGGATGAACTTGATAGACTTCGATTGAATACTTGAAATGTAC
TTTTAGGCAGCACTGTGTGTCTGATGCATTTGTTGGCAAATTTATAAATG
TCTCTGGGATGAAGAGTAGAGAGCTATTTTCAGCGATCGAAATACTTTAA
TGTTATTTCTCGAATCAAAGAGTGCTCAGAAGATTTTGTCCTAAAAATAG
TATTAAAGTCAATATTACAAATTTTATTGAAAATCTAGTACCAAGGATTT
TACTTCTTAAATAAAATATAATATATATAAATAATTATGTAATTGTTTAT
GATTGCGTCTAAAAAACTATTCGTGTTAGACTCAATTGAAAGCGATATAA
AATTATAAATTTAGAGATACATGCTAATAGTTAGCCAGTTTAGAGATTTC
GGTTTAAAATGTTAATCAAAACTGATTATAGACTTCTATTAACTGAATTT
ACCCTTCAAAGTTTATTCGGTAAAATTAATTTCCAAGCTTTTTGGAAGTG
CTAGATTCTAAAGGGAGCAGGGTTTAAATAATAGAGAGTAGAATTCAAAA
AATGACCTATTCTTGTAAAAAAGATTCCCCTTTGTATGTTAACGTACTCT
GTAACAGAATGTTTCTCACGTATAACTTAGCGTAGTACACGGCAACGATG
CTCAAAATTCCCGTAGATATCGGATCTGTTTACAGACAAATGTTGAGGAG
ATCTCACTTTTGGAAAGTCTATTCCTAGGAGACCCTCTGGGTTTCCAAGG
TACAACAAGCAACATGCTGAATGGACCTACCTAATGATTAACATCAGATG
AAAATAAGAAAAAAGTGACAATAATTGTACAAAAATTCAGAATGGAAAAA
TAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGGTAAAAAGGAATGTCCCCAAATACGAAAATCAC
TTAAACCATTCAGACCCAAAAAACCTTTTAAGCTGTTTTTGGCCCAAATT
TGCCCAAAAAGATTTTCCTTGAAAATCTGGCTCCGTCACATTTTGGGCAT
TGCCATTTTGCATCATTGTGCAAAAAATCAGAAAAAAATTATGAGTCAAC
ATGGAGAAAAGCTATATTTTCTTATTTGGTTAAAGGGAATTTCCCCAAAA
TACGAAAATCCGTCTTTTAAGGCGAATAAGAATTTCCCGGGAAAAACCAC
TTCAGTCATTCTTTAGAGAATCTTGCACCCCATCTTTGTACAAAAAATCA
GGAAAAAGTAATAACAGGATTTTGCACAAAGTCCAAAAAACCCTATTTTA
GGCAGTTTTTGGCCCAAATTTGCCCAAATATATTTTTTTCTCGAAAATCT
GGCTCCGTCACATTTTAGGCATTGCCATTTTGCATCATTGTGCAAAAAAT
CAGAAAAAAGTAATAACAGGATTTTGCACAAAGTCCAAAAAACCCTATTT
TAGGCAGTTTTTGGCCCAAATTTGCCCAAATATATTTTTTTCTCGAAAAT
CTGGCTCCGTCACATTTTAGGCATTGCCATTTTGCATCATTGTGCAAAAA
ATCAGAAAAAAATAATCAGTCAACTTTGAGAAAAGCTATATTTTCTTATT
TGGTTAAAGGGAATTTCCCCAAAATACGAAAATCCGTTTTTTAAGGCGAA
TAAGAATTTTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTAATTTTTGGCCCAAATTTGCCCAAATAAATTTTTTCTC
AAAAATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCGAACGAACAGACGAACGGACGAACGGACGAACGGACGAACGG
ACATGGGTTAATTTATAGAACCTCCACCGGGGCACCCGGAGGTAGGTCCA
AAAAGGGGGTCCCTTGGACAAAAAAAATGCCCTCCTCAACATCCACGGTA
ATTCTTCTCTTATAATATGCTTCTTATGAATATTGAATGGAAACATCTCC
CATAGCCATCACCAGAAAGGGTTCTTAAAATTCGACGAATAAATGAGAGA
CTTACCATAGTATGATTTATGCAATAACTTTATGATTCATCAAACTATCA
AAAAACATTTCATATAGTCCGAGTTTTTATAGAAGACATGTTGTTTTTAA
AAGTGCATTTTGTAAGACGACAGTCAAATGTTTCTATTTACCTTTTAAAA
AGTGTTTTAAAGTCTCAATATATTTCAAAACGATCATTGATGTATCTACC
ATTTTACTTTCAAAATATCACATCACCAAGCATTTCTTGTCTTCGACATT
TGCGTCTGTTTCAAAATTCAAAACATATTTCCTCTCTCGCCACAAATTCA
TCAACCATTTTGTATATACGTCATCATTTGTTTCATCCGATGAACTATCA
GACTCTTGATGAACATATTTCAATTCACCTTTCTTAAGTTTATATTTTTT
CTCAATCTCTGTGACTAAATCACCAAGATTCTTACGATGTTTTTCAGTTA
GTAGTACAGTTTGTTCTTCAACATGACCACTCCGTGTGAAACATACACGA
ATTAAAAATTGTGGAATGTATATCAAAACAAACTCCATATATTCCTTTTC
CCCATCCTGGAGATAATCACTCACCGTTTTCTCATTTTCAACCTCTATCA
TTCCACGTTTTCGTACATAAAAATGCTGACTCGGCACTTTGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014815TCONS_00014815Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014815-proteinTCONS_00014815-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000198supercontigsc0000198:392041..396183 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2	0.2	0.31	0.33	0.62	0.44	1.01	1.15	0.66	0.46	0.28	0.41	0.64	0.82	0.16	0.35	0.31	0.26	0.06	0.12	0.7	1.01	0.59	0.77	0.55	1.24	0.26	0.1	0.22	0.19