XLOC_008219 (gene) - C. hemisphaerica

Overview
NameXLOC_008219
Unique NameXLOC_008219
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000197:170918..174596+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008219 ID=XLOC_008219|Name=XLOC_008219|organism=Clytia hemisphaerica|type=gene|length=3679bp|location=Sequence derived from alignment at sc0000197:170918..174596+ (Clytia hemisphaerica)
TAgatgaacaacttttttttaatatattggAGTTGGTTGAAAGAGAAAGT
TGTTGTGAGATATTTGTTTTCAGTGGATTCTAGCAACTATGGCAAGCTCA
AATCAATGGAGTCAATCGGTGAAATGGAGAACGGAAGGAAACCAATTATA
CCAGACAGCTCAGAAAGATGGTTTTGGACCGACTATAAAGAAATCTCGTC
TTCAAGAAGCAATGAAATGTTATCAAAGAGCATTAAGTGCTGctaatggg
gataaaaatgaaacatcaTCTGCCTGTAAAAATCTTGCAAGAGCAAATTA
TGCTGTATCTTTATTATCTAAAGATGATACAGTGCAAGAGATGTATTTCC
TTCGAGAGACATTTCACTACTACAGTAAAGCTCTTGAAAGTGGAGAAGGT
ATCAAACCTTCAGAATGGCTGACAGATGTTGACGCTTTATATAGAgctct
ttttgtagaaatatgtgaaaaatttaatgaagcaGAGCCAAAAGAAAAAG
TGGTACGAATCGAATCATTTGTATCTGTCATCTCTGAGAGTGACTGTATG
TATCCCGATTTACAGTATAATTTGGCCTTAACCTGGATCAACGAAGCCTG
CGTTGGCTTAAACAACAAAGATTTTAAGGCTAGTTTGAATGCCTTAAAAG
AATGTTACCGACCAGTTGAAGAGTTGAAACGATATGGCAAGCATCGAGAT
GATTTGGCGAATGATATTGACTGCTTTGGAAGTGATATTGCCTTACAGAC
AGCCAGAACAGAATCAATGCAGGCTATTGATACAGgttcatttttgtttt
aattatcTTTCTTGCCTTGAGCTATTATTACAATTATTGCGTCTTCTCTA
TCAGATCTTTTTATGATCTGGCCTTGACATTTCTAACTTTTCAAAGAATG
AGACTTATCTTTGGGAATTGGAAATTCGCTAAAGCATTTTAGACAAAAat
tatttgatcatttttatGAACCAGATGATGGTATAAACACCAAAAAACTt
cgaaagaaataaaaagttgttacatgaatttttaaatttttgttttaatc
caATATGACATGGCACACTCTGAGACAACACAAAAATTATATTAGGGATC
ATTTCGGATAATACCGTGCACTCTTCATAATCCCCACGCCAAAATCAGTC
CCCTTATTAATTTGAAAGTACTTTTGGTGACATTTTAGGTGATTCTTTAC
TGGAGCAGCATTTGCAAAATGACTCTGATATCAACATGGATTTGATTTAC
ACCGTCATTGATTATTACAGACATGCAATGGTCCTCACTCGTGATGTTGA
GGTAAGGCAAAAGAAAACCTTTCTAATCAAGCTCACTGTTATTTGTTTTT
CCTGGTTTTTCAATTCTCAGACCATCGTATTCAAGCATTTTACAAAATAA
CCAGGATAATCTTATTTCTATGTATTCAACCTGGAAACCTACTCTGTTTG
TTTGGTCCCTAGTCATCATTTACTTTGTGAAATGCTTAATTAAGCTATGA
TATGTGGTAATATTAATACATTTGTTGTTAGTAATGACTTCAAAAATTCG
GATATGTGTAATTCAGGAGACTCCATTGACCCATTATCTACTACATCTTA
GAACAACCATAATTAATTTCTTGATTCATCATATTTTAATTTTAGATCGA
ACTAGAAGCTATAGCGTTGAGTCGTTTGGGCAAATTATACGATAAAGTTT
TGAAGATCAAATATAGAGCTTCTGAATGCTTCAAGAAATGTTTGGAAATA
GCTTCCACGCTGGTTCCTCGTGTTCTAACAACAGAGCGTAAGATTACCAC
TTAAGCGTTCTTCATTTTAATCATCTTTATCTCTTATTTCtgctgaaaaa
atgttgttttttttcaaaagatcgACTTTggtgagatacatctttggtcc
ACGTTTGAAGGGAATTGGATGGAtgaaccattcttgagaaattcaatttt
taagtttttatgacgtcataatcagtttttgcatttttcgcAAAATATTT
AGGTTGCACCTCAGactagaaactacatcatagtacccttcatctTCAGT
CATTTAATTGGTCAATTTCTGTCAACTAATGCGAtataaaaattatggta
attttaaaacataccataacttacctgagtttGTCTTCACTGGTCAAAAT
TAGGCAGTAAGGGGGAATTTATACAGTCTTTTGTTAGTAGAGAACATTAG
GGAATTAACTATCATCCAGCTAAATTGTGGTctcttaaaatcaaattttt
cagggttctatcaatcaaaacaaaatgtcaTTTACTTNATGGTCTCTTAA
AATCAATCTTCCCAGGGTTCTATCAATCATAACAAAATGTCATTTACTTA
TCGACATGCTGTATATTTTAGTTTGGTATCAAGTGGCAAGTGAGGCTCTC
CAACGCTATCAAcgggaaaatcttcaaaatcaagaagaagaaaaacgaaa
CCAGAGAAAAAAATACATTGATGTAAGTTGTAATCAATATTTTCACCTGT
TGATTTCAAAGAGccattttttccttgtattccgtcaaaccgtctaaaCG
GACACAAAAAATGCCACCaccaaaaagttctttaaaattcCAGATTTCCG
TCAAAAATTCGgggaaattaaataaaatatttttcctgaTTCCAAAATGC
CGACCTATTTTCTGCTGAATTCTATCCTTACGGACCGTTTCCGACATAGG
AAttaatttccgaaattccgccaCTCTGTGCGAAAAAAGGCTTGATTCCG
CCCCTCTGCAAACCGTGAAGAAATTCTGATGGATGATCATGATGGACAAA
GAGACGTCAATAATTTTGATTTCGTTATCTTAGGAATTGAAGACCGAACT
TGAAGAGATTGCTGAAGCcaaaaagaaatggaaaaaagagGGTGGAAAAT
TCCTTATGTTTATTTAcgaaaaatttccacccaagGTCACTTGTACGATT
CCAAAGAAAGAAGATGTTGTtgataaagaaatgaaaagtttgaagaaatt
gtttcaaaaagctGTCATTTATTACCACCCTGACAAACAAGATGTTGAAA
GGTTTGGAATGAAGTGGAAAGTTTTAAGTGAAGAAATTACAAAAGATTTG
TCAACCTTTTACGAAATCACCAAAGGAATGACTGATTAGCGATTGTTCTG
ATCAAAACATGTTGGAGTGTCTCTATTCTAGTACAcattgttttataaga
aaaaactatataagaacataaggcttcgatgaccaaaatattaagaacat
gttaagaacatttttaggcttacaactcataaagttaagagcattcgaag
ccttcaaaatttttaggtgatcttataaaaaaagcagcgaggatttgttt
atttgattattttcatcgGGAACAAAAACTTGAGTATAACTTTCTCAGGC
Attttaaggcatgtccaaattttccgtaatttttaaacaccaatagcact
cgccaagaggtgttcattcatacctttttggacGTGTATTAGGATataga
atatgaaaagtgctgttcgataattgttttgtttgcctaaataaagatat
atggttaaataatgcaaaaaatgtaaaaatgctgacgtcagcaaaactta
ttttttaaataacttttgattggcttaattttagatgctgaaattttgca
gaatgcaagagaatattgaaaagcacatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014678TCONS_00014678Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014678-proteinTCONS_00014678-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000197supercontigsc0000197:170918..174596 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.09	0.83	0.5	0.47	1.42	1.75	1.12	1.35	1.09	2.45	1.27	2.02	3.21	3.95	15.64	8.74	11.1	6.91	12.17	12.57	2.54	3.02	7.94	7.23	7.27	7.93	24	22.05	2.25	1.8