XLOC_008159 (gene) - C. hemisphaerica

Overview
NameXLOC_008159
Unique NameXLOC_008159
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000190:403040..409766+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008159 ID=XLOC_008159|Name=XLOC_008159|organism=Clytia hemisphaerica|type=gene|length=6727bp|location=Sequence derived from alignment at sc0000190:403040..409766+ (Clytia hemisphaerica)
ACTGTGAAGATAAACTTGAAAGCGCATTACAGAATGGTGATCGAGTGGTT CTAATGGATGTTAAGTTGAACGAGATCACGGACCGAATGAAATGCATACT ACAATCATACCAAAAGTTTACTGGTTCAAACAAGCCCTTCAAATTATTGG TATATTGATTTTTATCTTTGATTATGTAGAATTATTTTCATATAATGAAC TCTAGCTGATTCGGGCATATTCTAGTATTTCTTTATAATTTAAGCTTTTG AATCCTTATTTCCTGAGTCACTTGTAAATTTCTCTCAAATTACTGAAAGT CATTTATCGATAGATATCCCAGTTTGGGGACAAATGTAATGTttcgaatt aaggaaatattcAAACTATTCAAATTAGAATGTTTTGAGTGAACATAAAT AATGCTGCGATTGAATAGCTTTATTTTTGGTTTATTCTCCCACCTACTGA GTTAGATTAGATTACCtcatcggccctttttacgccggcccttattgacG TTATTTTTTCGTCactggcgtaaaaagggccgataaggtatacacGTCCC TTTTATGGccaattaaattcaaaaggagtATTTATCTTCCTTTGAATTCT CTCACTAGGTTGGAAACAAGGAAATCGATTGCTCACCCAATTTCAGGTAA CCATTATTCGAGTGGTCGTgaagctcagttggtagagcatCCGCCTTGCA ATTCAAGGATCGTGGGTTCAGTCCTCGATCGCTGCTAGCTCaacggatga gtagcttagattcaGGGCTATGAGTTCTTCCGTCTCACACGGGTTTCCGT CTCATTGAAGTTTATAAAAAGGatttctgtctcaaaattctgcataattc accaaaatttgctGTATAAAATTCACTCAccgtctcagacgaaaaacttt gttttgaccACTGTAGATTGGATAATTTGATCTAAGCGGTAAGAAATTGG AAACAAAAACTAGGGTTGGTGACCATTGAAAtgaaagcccgaagggctag aagcgaatcttttTAACCTTTCTTATAGTATTCAAAGTCATACCGACGTC AATACAATCAAggcaagatttgacgtcaaatcatagtagagctgacagtt agttggtcttaaagcttgtatttctttgtgttttagtcagagagttgttg taatatatttttttgcttagaatttcatgctctattaGATAGTaacaatc attttcgtttattttgacttttaaaaataagctatttctctacccctcag ttttgcctatggcgtcactattttggtcacaaaaagttttcccgaGCCAA ATctgcgtcctccctctcaaaaatatcttgtaatatactgttctttggaa tagactaaaaatggttaggtcgtcgtaaaaaagatgtcacggaaccccag gcttggccccctactattagacaaggaaaagtgaagcctttaaaATGTGT GCCGCGTTTTTGTTGATGGATTGAATCTGGAGATTCCTTTGTTATGGAGT GGTACATTTTTCAAGATCTGGcggtaaattttactttcattccgatattt gtgtgaaaaccacgcgaaGCGCGCTAGGCCACACAACTAAGGTAGGATTT AATGTCTTCAAATCCTACCTAGGAGATTCTTTAAAGACCTagatcgaagg atgatgatgaggAGATTCACTTCTAGCCAATCGGGCTTCTATTTTATTGT TGGTGACAGCCAACAGATGAAATCATTTTAATTACTCACGGGTTTTATGC ATCATTCGATATTTCATTTCGAAGTTTTAAATGGACGATCATATGCAAAA TTGTAAGACCCCCTGGTGATTAGATTATTAATTTTATTCGCCGTAAACTT TTATTTAGATTGGTGCTTTTGACATCAAAGAAGTGCATTGAAATACCACC ATCGAACTTCTACCACCGTATCAACATACCAATGTCACGTGAGCTGTTAG ATGAAATATTTctggattttttcatttcaaaagagAAATCACAATTGAAT GATGCATTACGTAATGTAAATCAGGTGCGTGCCAAGCTGACAGTTTTATT ACGATGAATGTGCAGTGATCCCTGACTTAGGTTCCCACTTGGGAATGTCT TGTCTCATGTCTAAAATTCTTTCAATTATAAAAAACTACGACGCTATGCT CTATGGTACAGACAAAGTCGAGATATCTTACAATCAACTGTAAttgatat tttgaataaaaatttcactttAGTTAAAATTGGTCTTGCCtctaaaatta tttgaaatttccCAAAAAGTACTATCAATTATTGTTTCGTTTCAGGAAAT GTTGAGCTTCATAGAGCTTCTGGAAAACCACGAATCAGAACTGCTTTCCA CACTTGCTGAACGGAGATGTTTTGGTCAAATCAGCACTGTTCGTCGTATT CTGAACATCAAGAAACTCTTCGATGAAGCATACTTTGGGTTCGATTTTTA TCCTTTTCTTTTACGCGTTCTTCCTTTTGGAGGACATCATTTAAAGGAAT TCCTACAATTTTCTTACACAGCATTTGTAGACAAAAGAAAGAACTAATCC CCCCACCCCTTTCGGCGCCGCGCGAGCACAAATTGTGGTAGATTCTTTTT ATGTTCNAAGGACATCATTTGAAAGAATTCCTACAATTTTCTTACACAGC ACTTGTAGACAAAAGAAAGAACTAATCCCCCCACCCCTTTCGGCGCCGCG CGAGCACAAATTGTGGTAGATTCTTTTTATGTTCTACTAGGGGAACAATT CTTTTCTCGAGAGCTCGAGAGTTCTCaatgaacaaaatgaaaattcaatt cctGGCTTATGATACTCTCTGTAgaagtcagaaaaaaacaatacatATGT AATTATAAATACTTTAGCTCTACGGCTTCTTAAAAGATACGAAGAAAACT TTTTACGTAATTTTGTGAACTCTCTGTTTAATACTTATAGTAAATGCCGT GCAGAAGAAGTATACGAAAACATCCGTGAAACACGTGAGACCTATCTTCC GATCGCTCGCCAGGCGGCCGTTCTCTTCACCGTAGCGGCCAATATGACNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNCAGGCGGCCGTTCTCTTCACCGTAGCAGCCAAT ATGACTGAAATCAACGAGTTTTATCAACTGACCATTGAACGGTTCATGGA ATATTTCGCGTCCGCTATCAAGCATTCAGACAGGTATGGAATAGGTCTAT TCGTAAATCATTTTTAGCATAACTATTGCCCCGTTTTAGCAATTAACCAA CAATTCTTGCAGCAAATCTTGTGggcaaagaatttttttctgcCTATCCT TTGTCTGTGTGTTTTAGTTAGTAAAAATTGTGCATGGAAATGTCACTTCA AACTCCTGTCTGATGCTTCttgcacattttttataaggtCAAACTATATA GGAACATAAGGAtccgatggccaaaatattaaaaacaagttaacattatt ttaaggctttttagacACAcaatttcttatgaaattgcACAGAAATATTT Accaaatggtgaaattaagagaacattttcaagcttaaacctcaaaaaaa taagaacatgctaatgTTCGTGTTTTCTAAAATAGCCTCCTTTGATGCTT TTAGGGTTGCAGTGCCAGCAGCAGTAGACCGTGTTTTAAACTCATTATTC CACGTCATTTTGAAATCACGTTTCGAAGAAGACCGAATGTTGTTCACTCT CATGGTCGCTATCGAGGTTTGTCATCGTCTCTACGAAATTTCAGCCCGTC AAACGATGGCTTTGTTTTTACTGTCACCTTTACTATTTTTCAGTCTGTCT TGGAATTGTTGTTTTTCCTTTTACTAtattatacagtggagtctccataa ctcgaacacgcacggggaacacaaatttgttcgggTTAAACAAATTTTTA GTTATTGAGTAAGGTTTACAATGTATTActtttaactgaagggaccataa aacttgtttgagCTGAAGAGGATTCGAGCTATAGGGGTTTgggttaaaga gactccactgtttcaagttttggactttttgatCGCCTTGATTTATAAAT TACAGTAGACCAACTTCTTTACCTACAATTTCCTAATatcatttgaaaaa tgttttgtttatgCTTTTTGTTTCCGCTAACGGGTACCCAAGTTACCCTT GAAATAAACCTCGTTCTCTTTGTCTTATCGGCTTTTTAATGCTTGCTGAT AGCGCTAGACAATGATATTCTCTGACGTAAATAAAGCCTTAGATACACTG GGACAAGGTTGTCTAAAGACTACCACACTGGTACATCTCAATCGTGTTTT TATATGTGCTTAGGAACTTCCAATTACTCCCAACCAAAGATTTTTAAatc ccaaagggctagatggcgtactttggctgaaaagtgtgccgtattTCGGT AGAAAATCCTATCTAGGTCAAATGACACTACagtagaatttcagcgcttg acctcTCAGAAGCTTCGCGGACTTTCGAAAATAacagcaacaatattttt ttcgaaattcgataatttttttgcttggaaaagcttaaagcACTCCAACT AGCCTCCGGGCTTTAACAAAATCTGCGCTCCTAacatttttttcctttat tcCATCAGACGGAAGATATTCATCAACGTATCACTATCGGTTGCCGTGAA TTTCTGATCGACCCCCGTCTTGGTGCGGCTATCAAACAATACCAAGCAGA AGTTCAAAGTAACATCAAAATCAATGCTTCCATCAAGAAACCGTTTGATT GGATGACGGATGAACAATATCAATACCTACTGGTAAAAAGATGACAAATC TTGATGGCTAATATTTTAACCGGCTAGACATGGAATAATGACTCAACTTT TAGCGGCCGAGCCATTGTCTTCTCCCAGGGACTACTGGTATAACGATTTC TTTTGGGAAATTCGTTAAAAAATCCCatggaaattttgagaaaagttgAG TTTcgtatttttgtaaaataactTCATTCAATTTCCCCCCACTCcatttt ttctagattttatcGCAGAATTTCGATTGGTTTGCAGAGACCTTCGATAA AATGGCGAAAGATGGTCGTGAAATGCAGTGGAGACAGATTGCCGAACATG ATACACCTGAATTAGTTGCTTTACCTGATCACCTAGACGAACGGTAGGAC TTCAAAAActgttttttcattgaaattttccCGAGAAGAACTTTTAAAGG ATATCATTCAACGTCTACTCTTCTAACAGTTGCTTACACATAATTTCTTA AACAAAAGGGCAGACAATTCGCATCGTGTGAGaacaatttttgatgaatt ctttttgttgattttgcatTATCAGCATAAGAGGCGCGTCTGAtttgttt atcaaaaaatgTCTTTCTTTAGAATGATTGGTATCCGCTTGCATAATACT AATTTCCGATTCGAATCCCCACTCATCACTCCTATGTTCCGTCTAGTTCC TAGATCTAGATCTTGACTTACTAAAAGTCCTAAATTACTTAGTCTATTTC GGAGCCCTATATACATATACTTCCTGTATAAAAACTCTTTCGTcggagga tgagcagaagcctatctacgtaaaatatcgacttaTCAATTACATATTTA TCTGTCTTTCAGATACACACCAGTGCAACGCTTTCTGGTAATCAAAGCTT TCCGTCCTGATCGTTTCATGCAAGCTGCCCAAATCTTCATCGCAACTACT CTTGGCAAAAAGTAAGACATGATCTGAATTCCTTTCTTTATCTGttttat acacttttttataagaacaagtttatAAGAACTTATTGCCAAAACCTTAA AACAAATtgagaaattgttgataaaaaaataaaaaataaatatttaaacc TGAAAATTACGAATAGGACGAGAACAGCAACAAATTACTGGATATAATAA GGGCAGCGTTTAATGATTTACTATTTACTGTTCTTTAACTTCTCACTTCA ACTTTTTCACTCCATAGTCTGGTGACTGACAGTGTTTTAGACTTGCGATT GATCACTGCGCAGAATCCTGTCACCATTCCCATAttgttggttttcaaaa aagatgCTTTCTTGTCATATTATTTGCTGAGACAACACGCACTTGCAAAA CAGGTATAGATATAAGACATTTCCCTTTACAATATGCGAACCTgcaatgt ttttttaatattgcACCACATTgacaacagctgattggttacaAGTGATG CATTGAGAAGAAAAAAGACCGCCATTGCAGTGGTGTACATCAATCATCGG TTAAACGTACCGAAAGCaaagtttctagaggggtcaagaccccccccctt aggtaagaggaccccccTTAAGtgcaatttaaaatttcacaccccagtta gaaaatcagtataaatgaaatttcgcataattcaaggaagatcccCCTTT GATCCAACTCTATAGTTGCTATTAAATGGTGCAAAGTTTGCGCCACTTCT AGGCTCTACTGGCGGTATCTAGTCAAAATTAGTATTCTGTAGCGTACCCC TATCTCAGGAATGGCCACATACCTAATCAGTAAAAAGCCGACAATTTTTT GGATCGACAAATTTTGTCATcttgtttttttaatattttttaggtGTCAT TAACTGAAATGGAGATGAACGGTCAAACAGGGAAAACAGAAGTCCTAGAA GCTCTTCAAGAATGTGCTAACAAGGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014582TCONS_00014582Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014582-proteinTCONS_00014582-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000190supercontigsc0000190:403040..409766 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.95 2.07 2.78 2.95 10.5 7.19 6.09 7.23 3.38 6.07 3.43 4.35 1.73 1.23 1.33 1.62 0.74 1.18 1.08 1.6 1.53 1.4 0.83 2.6 21.9 17.5 4.33 3.62 0.94 0.8