XLOC_008046 (gene) - C. hemisphaerica

Overview
NameXLOC_008046
Unique NameXLOC_008046
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000187:183901..187278+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008046 ID=XLOC_008046|Name=XLOC_008046|organism=Clytia hemisphaerica|type=gene|length=3378bp|location=Sequence derived from alignment at sc0000187:183901..187278+ (Clytia hemisphaerica)
TCTTTCACCGTTTTAGATTAAAATGAAACAACTTTAAAACTATGGATACT
AAGAAGAACTCCCTCGTGAAAGTCAGAGATGAGTTTTTGAACAACTTGCT
CCAAAAAAAGCTCACTGAACAAGAAAAAACTGGTGGTATTCATCGAGATG
TCTTTGAGCGTGATCTTCTATCACACGCTTATGATTTCGCATATGATAGA
GGTTTGAAAAGTGATTTGGTGGaatattttgtcattttctatCAGAATTT
GATTGCAGACACAGTAAAACAAGGTAATAATCtgacacatttttttttag
ataatcttTTTGTTGTTGTCATACAGTgtagtgtgtcccaaaaaaaggtG
GATGAATTTCTATAAAGTGATATAATAGTTTATTCATaaataagtaagtc
tgcgaccgcagtcggtggcgacccgaaggctcctctttcgatagctattt
acccgaaggtaggggagggcgccactctttctccctggattgctccactt
acccttgatccttctcttaattgctcagcatcaagcagagaggcatcaag
taccattttgggaatctttggtatgacccggctgggggttgagcccttgc
gaaccgtagccggatgctctaccactgcacctCAGTCGctaaaattatat
aaaatattCATACATAATTTATGCTATATTTCATGACTTGTATACTTGAT
AAtcatttcaatctcaaaaacctctcaattattattttgtgaattgaata
tctattgattgaacaaAGAATTGTAATCgcatttcaattattttaagcCC
AGTTTGGATGAtgagtttttaaaaaaattgtacgctttttttgggacaca
ctgtatgtATGAGAAGGGAATTCCGTGAGCTTTTTAGATCACGAGATTAA
AGATTTTCACCACACAATGAAGAAGTAGAATGATCATTTTCACTTCCTAA
TTGTAGATCTACCATTAGCATCAGCCAGCATTCTGATCAAGAATCGGATC
CAAGAACTCACTATGAACCACAAGAAAAAATTccctcaaactttcttttt
cgATGCGGTCAATTACATTACGAGGAACATTTTGCAACATTATCATCTCT
TCGTCTTTGCGTTTTGTCAATCTCGACAAGCAGAGGTAcacatttttatc
tataagaacatccaaaatttttgaagcgttcggatgttcttaacttttga
gtttttgagttaaaatgttctttacatattcttaatttcaccaatttgtg
agtattttgcgCAATTTTAAGAAATTGGTCGGTTTTAGAGCCCTTAATGT
Tcgcttaacttgttcttgatattttggccaccgaaccgaagccttatttt
cttatttagtttgtttttatgaaaactctctctctaattcgagtcatttt
caagggaaattgaattttcatcgtgataagggagcttatcaaaTAATAGA
GCTCTTTCTCTGTCCGCAACGTTTCATTGTATGCCGttacaagttttatt
tttgtgcATGTACACACTGAATTCTCTTGGAAATCATATCAAGGCGGCAA
ATGAAGTAATGTGAACAGGCCCTTACTATATACTAATGCTATTgtttatt
taaaggttttatttttacataagtctttccgtttcatatcagacacgtaT
TTCATaacaggacagtgtcttgctattgttatattatgctgatgtgagca
aaaaaatgtttttcttttcctctttctgatcaatcttgcttcacatccat
gtcaatccaatgtgaaaaagcttgtgagttaaaattaatgagtaagcaaa
cgatatcactcttatttaaaaacaaaacctttaaccacCATTTTAATAAT
ATCACACCTGATTTCTCTCAGATTCACCAACATGAAGTATTGGTGAAAGC
AGCTCCTTATGAAGTAGAACCGTTAGATGTCAGTCAACCCATCTCTCAAT
GGAAGTTGGAAAAGGATCTACaggttgaagaagaaaaattcattgAAGAA
GAACAGGTATGTGTCAGTACCGTAGATTTataagcccgaagagctagata
tCGAACtgtaagccatcgcaggcaaaaaaattgaatatcggaaaaaaata
ttgttgctattgttttcgaaaacccgtgaagcttcttattggtcaagcgc
tgaaattctattgtaatgtcacgtgatttaagtaggatttcctacctaac
catgGCACACTTTTCACAAAAGcttgacatctagcccttcgggctttata
aatctatggtcagTACCGTAGCTACAGGGGGGCTTTGAACCACTTTTGGC
ACacttggcacacttgttccttgggtgaatatatCTGGGGggtatctttt
tcattttttttttcaaaaatttttgatttttgccgtctggggacaagttt
ttcatcaaaatgagaGTAAAACTTTTGGGTAGGCTGGAGGCttaaaaaat
ggtcagatttggttgaaatttggcacaattGTTCATTTGGTcaggtaaat
atttttcaaaaagtttttttggcgCAAGGGGATAAGCTTTTCACCAAAAC
AAGGCTAGAACTTTTTGGGCATCCTACGGTACATAATCATCCCTTGAAAC
GTCTTTTCACCAGAACTTAAAGAGGAGCCTTGAAAACTCAATGCTTGGAA
TCGAAAATGCAATAGAGGAATATTTCGAGCAATTATTCACTCAATCTTCA
CCATCCTCCAATGATCAAATCGATTTAGATGCCATTACACAGCAAATACA
ACAAATCATAACAAAACACAGTGAAATCACcacaaatgaaatgaatttca
aCTTGGAGCGAAGTCGTTTACTATTACTGAAGAACCTTAAAAAAGTTCAA
TTGTTACATGCGACCAATGGTGGCAGAAGGGATGGAAAATCACCAACAAA
AACGTTGAGCACTGCAATCAGTACtataaagaaaaagtgaatttttaaaC
TACCATAATGACTGACTGGTTCCATTCAAACTATTAACTGAAAGTGATTT
CTTTACAACAATGTTTCTGGACTAATCTTTtcatctacacgctttttttt
tataagaatggtgtaaatcaatttcatcatggatattcttaacttttttg
ggaaaatcatcctaagatattcttacagcattcttaggttagaatcctaa
ttcagactagatttaacatttagtacatacgtctcaaaattccatgatag
tgatattcttagcatattcttaatttttttggtcattttcatcatggaca
ttcttacaaagtgtattcttatataaaaaaagcgtgcatgAAATACTTAT
TGGGAGGTTGATTGTTTTGTGGTATCGGCAATAACAACAAATAGACATCG
TTTCGAAATCTTCTGTAAGAAGTTTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014367TCONS_00014367Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014367-proteinTCONS_00014367-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000187supercontigsc0000187:183901..187278 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.37	11.38	31.15	33.47	51.31	39.05	11.32	11.5	13.48	8.88	11.28	11.52	3.81	3.76	4.55	4.32	8.13	11.15	5.86	9.76	6.31	7.61	8.31	8.39	26.24	21.16	5.9	5.92	5.51	4.62