XLOC_008012 (gene) - C. hemisphaerica

Overview
NameXLOC_008012
Unique NameXLOC_008012
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000185:373072..376965-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008012 ID=XLOC_008012|Name=XLOC_008012|organism=Clytia hemisphaerica|type=gene|length=3894bp|location=Sequence derived from alignment at sc0000185:373072..376965- (Clytia hemisphaerica)
TTGATGGGGATATGAATGAAATAAATTTAAAAACTTTTTAGAAAAAATGC
TTATGGAAATATCCAGTTTGAAATTACTTTGCCCTATAAAAAGATAATAT
TTTTTGTCAATGTGTAGAAACTACAAATCTGAAAATGACAAAAGATGATA
TTTGCAGTTGTGGTAACACCAAGCAGCCAACACAATCACCAGATCCTTTG
TTAAAAACACAGAGTGAATTGGTTGAAGAATTTTATTCTGGTGTAACATT
GCACGGATTTCGTTTCTTGTTTGAAGGAAGATGGATTCGAAGATTAATTT
GGTTCATTATATGTTTTGCCGTCTTTGGGTTTTCGATATACTTGACTTAC
GGTCTATTCAGTGAATTTTTAGATCGTAAAACTTCAGTTGCGATCTCACG
ATCATACACTGAACAAGCTTTGGATTTCCCGTCAGTTTCAATATGTCCAT
TAAACGTTCAATCAAAAGCCAAAATGAAGAACTTATCTATTGATTACACA
ATAGATGAATTTATTATCATGAAAGATAAACTACTCTTTGGACATGATTT
AAATCCAGAGCTAAATATTACCGTTGATCAGTTTGTCAACGATTTAGAAG
CTGCTGGAGTGAACAATCTGCTTGATTTTATGAAAATGTATCAATTAGAC
TTTGATGAGATTGCTTCTACAGATGTATTAGCTGAATATCTTGTCGGCGG
GTCGGTTTGTTCTATTTATGGTCAAGATTGTGAAGATTCAATGTTTACGG
AGCGAATCTGGAGACATAAAAGGTGTTTACAATTCAATTCTTTTATGCCA
GGCGGTGAACCTTTTACAGCTCGTAAAGAATCAGATTATTTCACAGGTTT
TCAGTTAGAGCTAGATCTTGGTGGAACGGAATATTATCAATCTCCATCAG
CGCATAATGGAGTGTTGTTGATTATTGAGAACTATGGCAATGTTGATGAC
NGTTTTCAGTTAGAACTAGATCTTGGTGGAACGGAATATTATCAATCTCC
ATCAGCGCATAATGGAGTGTTGTTGATTATTGAGAACTATGGGAATGTTG
ATGATTACGTTCCAATCAATGAAATCGTTACTGTCATGCCAGGGACACAG
ATGTATGTGAAATTAACTGAAAATGAGGTATGAATTAAATGCATTGAATT
TTGTTCTTATCTTTAATATCAGCCCTGCTTTGTCGAATCCTGGAATGATT
TGCGACTGTAGCATGAAGGTAGAGTATCCAGCTACGGTGCACAAGGTTGT
TGGTTCGATCCCCAGCCGGGTCATACCAGCGATTCCCAAAATGATACTTG
ATGCCTCTCTGATTGATGCTCAGCAACTAGAGACTTATCGAGGGTAAGTG
GAAAAATCCAGGGAAAAGAGTGGCGTCCTCACCTACCTTCGGCTAAATAG
CTAGAGAAAAGGGAGCCTTCGGGTCGCCCTCGAATGCGTTTGCAAACTTA
CTTACTTACAATTTGAATAAACATTTAGATCACGATGTTGCCAAGTCCCT
ACGCAACTGATTGTCGAGAAGTTGATTTCAAATTTGTTGATCCAAAAACC
AGATACACGCAAGGTATTTGTGTGATTGATTGCATCATTGCGCATGTGTA
TGAGAAATGCGGTTGTTTAGGCGAAGATTATCACAGAATCCTAAATATAC
CAGGTATGAATTATTATTATAGAATCACGCTCAGTCTCCGAACTTGATGA
TTTTAGATTCTAGACTGCACAAATATCTGAGATAAGTTTTGTTACGGGAT
GGATGCCTCAAAAGCCACGTGCGCTTATATATATTTTTTTATAAGCATAT
AAAAATCCGAAAACAGGCCCCAGAGATGCTTAGGTCGAAAAAAATGCTTC
AGGGATGCTTATATCCTAATACCTAATACTGCTTATATGCTGCTATACTA
CTATAATACTGCTTATATCCATACTACAAAGTAGCTTATATGTACTTTCT
TCATAGGCTCGAGGTAATGCTTAACATATGCGTAATTTTCCCCCATATCT
GAGCCTAGATATGCTTACAAGTGCAATGCTTATAAAAAAACATGTATACC
AGGAGTTCTTGGCGATATCTGGAGATGGGATTTATTGACTCCGTCAAGAT
TCATCAAGGAAGGCCATTTTTGTACAAAAGGCCGTAAAATTTGATTTTTA
TCAATTTTGTTCAGGGCGGGGGAGTTGAATAAAAATGATTTCCCAAGAAC
TAACTTTAACCAACCCTATTTTTATCAGGGGGGGTGTTTTCCACCAGGCT
GCCACTCTTTCGCTAATAGCTCACTGAAAAAAAATTTTAACACTCTGAAA
GTTTTCGACTTTTAATATAAAACTATTAGCAGCATGTATACCAAATTTTA
CTGTTATACACCGACCAGATCAGGCTTTATGACTTTTTTGTGCAGGCATA
TCATAAAATCCNAGATCAAAAGTTATACAAGGCTGGTGGAAAACACCCCC
CCTTGAGAATACAAAATCCGAAAAAGCCTGATAATAATAGGGTTAACCAA
GCGAGCTGTAGAAAAGCTCTCTGGAAAAACAGTGAATAAAAACTACACAT
GGATGCGTTGTCCATATCTACACATTCTCTATATAGGCTAATTCCGCCAA
GAAATGTAAAATGATGATGTTGTTAGTTTTAACTTTCATGTCATAACCTT
TTTANTTAGGTATCAATGATAAATTTTAAAAAATATTTTAAAAATTTTCA
AAAACTGCTGATGTCATCAAAAATGACGTCATTGTTTTTTGAAAAAATTT
ACTCATTTTCTGCATGGATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTCATCGGTCAGCG
ATAATTGTTAAACTTTGTGATGACGTCATCACCTTTATGATGACGTCATC
AACCCAAATTTTTTTCTATGAACTCCTTTAATGCTAGAGAATATTTGTGC
CAAATTTCAAGTCCATACCTTTTCTAGATCAAAAGTTATACAAGGCTGGT
GGAAAACACCCCCCCTTGAGAATACAAAATCCGAAAAAGCCTGATAATAA
TAGGGTTAACCAAGCGAGCTGTAGAAAAGCTCTCTGGAAAAACAGTGAAT
AAAAACTACACATGGATGCGTTGTCCATATCTACACATCCTCTATATAGG
CTAATTCCGCCAAGAAATGTAAAATGATGATGTTGTTAGTTTTAACTTTC
ATGTCATAACCTTTTCATTTTCTTAGGAGCCAAATTCTGCAAACTGGAAG
AAGTTGCATGTTACAATGGAGAAAGAAGTATATCTTGTATTAATCTGGCT
CTCATTACCAGACATTTTCCAGAAAGGTTTCCAGTCTAAAGTTTGATAAC
AAAGACTTTAATTATTTAATTAAATAATTGAAATAGGACTTTATCAATTT
TCATATCCCTTGGTAAATTTACTCCTCGTCACAATACAAAGTATTTCTCT
TCCTTAAATGGGAATACTACCATTTTATCCTCTTATCCAGGAGGGTACTA
CCCCCTTGCCGACCGACAGGGGTGCTCCGCTGAGGTTTCGAAAAATGGAC
CCTACGTGAGACTCGTTTTTTTCGAAAATTTTGCCGAAACTTGCGAAAAA
ATTGACCCTGATTGGAACTGAAATTCCAAAATTTTCGAGAGACTGATTTT
TCTATTTTGGTATTTTTGCGACCCTACATGGGACTCGTGTGGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014332TCONS_00014332Clytia hemisphaericatranscript
TCONS_00014331TCONS_00014331Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014332-proteinTCONS_00014332-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185supercontigsc0000185:373072..376965 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.06	0.06	0.03	0.05	0.23	0.36	0.33	0.26	0.21	0.24	4.84	3.27	1.81	0.84	0.48	0.61	10.03	10.11	1.2	1.29	0.88	1.56	1.23	1.27	0.16	0.23	0.08	0.11