XLOC_007737 (gene) - C. hemisphaerica

Overview
NameXLOC_007737
Unique NameXLOC_007737
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000174:384195..388617+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007737 ID=XLOC_007737|Name=XLOC_007737|organism=Clytia hemisphaerica|type=gene|length=4423bp|location=Sequence derived from alignment at sc0000174:384195..388617+ (Clytia hemisphaerica)
ATAATATCTGAACATTATTTGTTTAATAAACTTTATGATCTATGCCGCAT
TGACCCCCCTCTTTCTTTTACTTTAGACCCACTGTCAATTCAGGCTTTAA
AACGGGGTTGCAAATTTGATATTTCTGTCATTAATACAAAGCAAACTGTC
CTGGACTGCACGCTTTCTTACGAATTATAAATTTCGTCGTGTTTGCGTTA
GAGTCTGGTTGACTTTTTGTTGACAACGCGAGAATTTTTTTGACAGACGG
TTGAATCGGAAACAGAACGAAGATGCAGAATCGAACCTTACTTGCTTTAG
CCCTGGTATTGGCTGGCATAATTGCTAGTgaaggtatttttttaaatttt
tgttataCTACGAAACGGAAAACAAATCCTCAACAAATTCATCGCTAGCG
TTTtcgttaacgatttttgttcatgcgtttttttaattgagctatttctt
ttctttttattttgggGTTTGACCAAAAAAAGTATGGCGTCTAGGCTAAA
TTCTCTCGTCAAGATGAGAGCCCCTGTTAAGAAATGCTACCCAGATACCA
TAAGTGATATATTCGTCTATATACACATGGCCTCTGTTAGAAAAGCCTCG
GTCACCTTTAGTGTCACGGGCTGCATGCACTTCCTTTGATATGTTTtaat
ataggggatgcgtatcgtgtataaatTTCCGATTCGagagttacccccgt
ctttgtatTCTGAGTTTCAGAAACTTGACCAAGTAAGTTTTATATGAAAG
ATCTTTAAATTTCAATAGATTCGAATTAAAAACTTGAATGGTTAGAGGAT
ATTACAATCATTTGATTTCTgaaacttttaaagaaaattgaaacaggtta
TCCGGAATCACCCctacatcaaaatcaatttcgggGATGTGCGTAGCCTA
AGAATGTGTTCTAAAAATTTGGTTTGCGTAAGATGTTTGAGGTCAGGACA
CTGGCGCTTCGTTGAACTCTAATAAAATTAAACAGCTCTGCTAGTGGCAC
TTATTAAAAAGTGTAACAAATGTTTATTTGTATTTAATTCCAGCTTGTAT
GCCTGGTATATATGACCATGGACATTGCAATTACTACGTCTCTAAGAACA
AAGGAGCTTACTGTAAACACAGCTGGATGAAAATGTTTTGCCAATACGCT
TGTGGTTACTGCAAAGAAGGTAAAGAGGCTGTTGACTTAACCCTAAAAGG
TACCGTAAAAATACATTTGTCGCATGCCTGAATTTTTGCATGATTTGCAT
ACAGATCTGATGTATTTATGCATGCCTTAGGCTATTTAATATTGGCATTT
TATTGGTCATTTTCTTTATATACAtcccggggggtactacccttgtcgac
cgacgggggtgctccgctgaggttcgaaaaatggacNNNNNNNNNNNNNN
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NNAAAAAAACTTTCAGCCCCTGTTATCTTTTATCAAATGTTTGTCATTGT
GAATTGGGAAAGAAGAAGTTCCTGGAACTCAAGGCTAATTTGACACTTTA
AGGTTTTTAATGGGGAATTTAAGAGCCTCTCTAACTCGATTGCCTCCTAa
gctcgaacaaatttgctcGTCCCTACAGTTAATCCCTTAAAACCCTTTCC
CcatttctcaaaatttccatGATTCGAACAAGTATGTATTTCACATCCGT
GTTTGATTAATGGAAAATCTACTGTACCTATTTCTATTGGGATAGGCACT
GCTTGAAACTTAACATATAACACAGTCAATATTAGACATTCTAATCCTGA
ATTTCTCTTATGGAACCAAGATTTCCACATTACAAAGGGAAACTGGTGTC
TGTTCTTAACCcaatcacacccctgtctcgcagcacTGGGAACTTTTATC
CCATTCTTATCGCATtctattacacccctgtctcacaaccccgttggaac
ttttttcctcagaagggacaaaaattcctattgaaataccaatggggata
gaaaatctattgttccgaggttaaaaaacccagtgaatacattgaatttc
gaatgtggatgaaatcaaagtcaatttcccgaTGGGGATTGTAGGGTGTT
TTTCTCAccagagatgaaatttttgccaaattttcagGTGAGGTTGGAGA
CGCCAGTGGGTCTGAGACACAGAGGTATCCAATCTTAAGGTCAAATAAAC
ATGATGCTAAACGAACCACATTTTTTCTAGGTGCACCATGTGAGGATGCT
GGTCAAAAATGTGAAATTCTTGCACAACTTGGATTTTGTGATTATTATCA
CACTCACCAAGAGTACATGAAACGTGCATGTCGAAAGTCTTGTAATTTCT
GTGGAAATGAAAACCCTGGTCCAAAAGAATAAAATTATCAACTGTGAAGA
GTTTTTGAAGCGAGACCTGAGATTTAAGCAATACGAAAGGCTATTGGAAA
CAGATTTATAcacattttggtcatttttgacATTTCTTCCTTCTCCACTG
GCTTTTGATTtgcttgatattttgaaaatctatgacagaaaatcaatttt
tttatccgTTTCAAGCTCAATGACTCTTACCGTGTTTTACTCTACCTACC
ACTTACATGTaatgtaaaaattgtaaatagcTCACCAGCTTTTATATATT
CACTTAGTATAATATTTTAGGAATATTTTGGAAAGCAAGTATCAAAACGA
ATCGGGAACGAATCACTCAATCCTTTTCTAATTTAACAATCTTGGATTGC
TTTTTGACGCTCTCACTTTAATAAAACTTAGAAATAAATCAAGCCCTGAA
ATAATACAAAGccgtaaaaaccttgaaaaatacCTTAGAAAAAGTTAGGA
TATTTTTCCACtggatattttgatatttttgatataGTTTTTAGGTCACt
tactctttttacaaagcattgatgactttttgtaagttgtgttttcaacg
acgcgaataaaaatatcgactatgacgctcatccaagatcttggatggtc
gtcatggttacttttgtcttcgctgattgcgcgatgaatagaatcttgat
tcgtcggcacagcgtaaatatatgattttgagctgtgttTTTCACGGTAT
TAATTGACATACCATTAATATAGGAAAAACAAGGCTAAAAGGTATTCTTT
ATTTGATACTTTAGATGAGGTTTGGGAGTTTCCATAAACAGTAGTTGATA
ATTGATTTTCATTCCTTAATTAACAAAAGGTGCCTTGGTAAATAtttaag
aaatcaggtgttttagagtccgc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013847TCONS_00013847Clytia hemisphaericatranscript
TCONS_00013848TCONS_00013848Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013847-proteinTCONS_00013847-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000174supercontigsc0000174:384195..388617 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.99	1.12	1.38	1.52	3.25	2.87	5.01	6.64	3.76	7.08	3.35	3.94	48.73	40.61	4.7	3.72	39.86	56.41	33.41	19.49	71.14	64.55	24.82	23.29	29.02	40.05	4.47	2.84	2.09	2.4