XLOC_007652 (gene) - C. hemisphaerica

Overview
NameXLOC_007652
Unique NameXLOC_007652
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000171:71104..81282-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007652 ID=XLOC_007652|Name=XLOC_007652|organism=Clytia hemisphaerica|type=gene|length=10179bp|location=Sequence derived from alignment at sc0000171:71104..81282- (Clytia hemisphaerica)
CAGTGATTTTGTAAGATATTTTAATGACTTTTTTGATGTCTTTTTAAAGA TTGTGATTTTTTAAGAATGATTAAAAATGAGATTAGAAAACACTCCTCCT GGGTACAAATTTCACGCACTAGAAGTCAGCTTGCTTAGCATTGAAATCCC GTGCGCAGGAGTGCTTTATGGCAGCTATTTCAACAAAATTGTATGCAGCC GAGGAACAATTTACATGTTAAATAGTCATACATGAGAGTTTTCATATTAG TATTCTACGAACATTAGAAGTGCAAACATCTTGACACATACATCACAAGT AATAATCTGAAAAATTTGGAAAATTTGAGAGGAAATGGCAATATTCCTAG CTCTGTTGCTTGTCTTTTCAGGTATGATTTATGATTCTGATACACCTTAA ATTACGTCTCGGGCAACACTCACCTCGTTTTCAAAATATTACCTTGGTAG TTGAATCCCAGAGGATTTCATAAGAAGTTTATTCTATTTATCAAAGCTTA AGAGATTTAATCACCTTGGTAATGGTTTCAAAACGAGGTAGCCATTGCAC TTAAAATGATTCATGAAAAAGCCAACAGTGCTCAAGATTGTAGAACGTCC TTTAGTAAAATAATAAAGTGGGGCAAGTCGCTATGGGTACGATATTGCTA GCCTTCCACATCCGGTTAGTGAGATAGGGATATCAAAAACTTTTGAGTAT AATTGATTTTTTTAGTTTTTGATCATACAATTGCGATCGAAAAGACATGG ATTCACACAACTTTATGGAACGACGTTTTGAACTGGCAACCACCTCATTT GCCATGCGCTGATGGAACTGTACATCTCTCTGACGTAAGAAAAACATTTG TACCCAGTTTCCTTAGTTGCCTGCTCTCGCAAAATGATGGCGGTAGTTGC TTCGAGATCCCGCTGAGTACAGCATAGTGCTTTGTCTTAAAAGCGTTAAA ATCGGTTTTTGTCCTACGGGAAATTAGTTTTTCAAACCAGTGAAAAGGGA GAATATCAGTATACAATATAAATCAATAATATCCTGCTTCCTATGTTTGA CTCTACCTTTGAAAGTTTCGTTGACCGCCAAAAGACTCTTGAAACAAGCG ACACTAGGAACTAAAGATCTCTCAGGGCGCACCTGCAATCAGTGACATAC TTGGCACAAAAGGGAAATTCACCGGGAAGTTTTGAAACTGCAATCGATTT GTAAGTGCTCTAAAGTAGGTTGGAAGGGTAGAGTTTTAACTCTGAGTTTT AACATGAGACTTAAGGATCTGAAGATCCAAAAGTTCAAAAATGGTCCAGT AGGGCTTGAAATATAGCCTAGAAACCAATAAATCCCTCCCAGATCAAAAT AATCGATGAAATCAAGTTGAAGGCCTGAAATTAACATTCTTGCTCGAACT TCAATTTTCGAAAAATGGTAAATTAGCCAAAAGTGCCAATATATTATGGC ACAGATTGTGACCTAGTTCAATTTCTGATCTTGGAGCCGTTTTTGGCATG CTTCTTGATTATAATTGTTTTGGGTATCAATTAAGGCTGCAGCAAATCAG AAAGCATTTAAACCATTAAGAAATTCTTGTGGTCAGTTTGAATCAGTTTG AAGGGAGCGTAAAAACAGTTTAATTACACAGAAGAACTTATGGTTATCTA GTCTAGCAAGCTAGACGCCTAATTTATACATAGTAGAAATAAAGCAAAAA ATAATGAATGGAACAATTTTAGTCGTCTAGAAACCTTTGTGCAATAACTC CAAACAGAACAAAAGTGTCAATATTGCAATTATAATTTTTTCCTGCTCAA AATAATTCTTGAGAAAAAAAATATGTGTGGATTTGTGTATTGAAAGTTTT TCATTTTAGTTGATTTCGTTTTGAGAAGTTTGTTGTTGCTTGATAAATTG TTTTCTCGCTACGCAAGTTTCTGCGTAGCCAGCCCCTGTATCTATAATGC TGGAACACCGGATTCTTCCAGTCGTTTATACAAACTAAATCCCGTATTAT TATTATTAGTATTGAGTATTGGTATTATTAGTATTACACGCATTATAAAC GACTCCAGTCTAATGGTTATCTAATTACCAAACTTTTGGCACAACTCAAT ATTTTCGACAACAAAACAACCAGATCAAGTAATCACATGATTAAGCACCT TTACCTGTAACAAATTTATAAGGTTGAAATCAGACAAGTACGCATGCGCA AACAAATTATTTTTCTCTTTGATTTTTACAGGGCGTTGTCTTCATCTCAA ATATTACTTTACCATCAGAAATTGTAAGTTTACTGTTGTTATCCTTTGAA TGTATTATTATCAAAAGGTTGAATTTCTACATCAACAGTCAAAAAAAACA AACTGACCAGGGGGGGGTCATGCAGTTATTATATAAACACTATGACAATT ACTACCGTGGTGGTATATAAACCAAAATTTGGGAAAACAGTTACTCCACC AGTGGACTAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNACCCCCCCCCCCCCCTGAACTGACTGAT ATATAGTCAACACTACATAGAGATTCGAATTACAGGAAGTATGTTAAAAG GGATTTCCTTGACGAGGACTGGAATAAAGTTCGAATTATAAAGAGATTCG AAAAATAAGAAGTTCGAATAAAGAGATTTTACTGTTGCCATGGGATTGAA GTTTTTGCAAAGGAAAGTGAATAAAAAACTGAGTGTTTTATAGACTTTAA TAATTTTATTACCCAAGACCATAAATTTACCGGTGTCAATTTGTTTTTAC TAATCCAAATACAAAGAACTAAAAATACAATTAAGATTTCGTCAAAACTC ATTATGATGATAACGGACGGGTTATAAATGGTACCGCTAACATTTTTAGA CCATGTTCAGAAACGAAACGGTTCCGAAACAAGTGTGAACGCCAAAACTT GAAAGGTTGAAAAAGAAGACGTTACAAAGCAAAACAGATCGAAACGGTTT CGTTCTACTTTTTTTATTGGAACGGAACTGCTCCGTTTTCTTCTCCGGAA CGTTCCGAAACCAGTATGAACACTCTCGATCCGTAACGGAAACCATACCG GAACGACACGAAACCGTAACGTCTGAGCATGGTCTAAGACTCCTGTGATG TCTGAACGTCCTTGTTTCTTTAAACGCAGATCCTGTCATCAAACAGTGAA ATCATTTTCGATGCAAATTCCGAAATCCCACTCGGCAAACCGGTCAATGC CGCTCCGGATACATCAAACCCAAACTGTGGAAAGAACTTTCTCCCGGTGC AACATTCCTGGCATAACCCGTTAAATTGGAAATCTGGTGATGAACGGGAT ACCGGAATCCCGTATATCGAGAGAGTCCCATGCCATGAGGATGATGTTGT TTTCCCAGAGGTGAGAAACTTCATACCGTCCATTTTGCTTTGAAAGAGTT CAACTAACGTTAAAAATATTTCCAAAGTTCCATTCCCCTTACACAAGTTT TTACACGATTATTCGTTGTCAAGGAGAGGTTCTTTAGAAAACGCTCTCGT TTGGCGGTTGAACAAATTTTAAAATTCTCTTGAAAATTTAACGAATTCTT CCATTTTGACTTTTCAGCATAACTCGTTCGTGGCGAAGATGAGTCGTTCA GTTTCCGTCAACTCTGTTCAACTCAGAGGAAAGGTCAGTAATATAAAGTA ATTAGACTGGCAAACTAGTCTGCTAATTAATCATGTCAGAGGGCGGGAAC ATAAAGGCGACGGGCGTTTGCTGAAATAGGAGCTGCGTAGGAGAACGAGA AAAAGTTGGTGAGAGGCTGCTGATTAACAGGCTTTCAGCCCTTGCCACCG ACAAAATACTTCCTATGCTCACTTTTTCCACGTGATACCGTTCCTGGCGT GCCAGTCTATGAGGTAATTAGCAATCTGAACGATTCTTTACAGTTGCGTG AATGACCTACTCCTTTGAAATCTGAATGATTTCAAATTTGATTTTCTGCT TGCTTTCAATGTATAGAATAGGACGGGACTTAAAACTTGAACAGAACCAG CATTCAAACCTTAGAGACACACGACTTTGAGATTTGACATTTTAGATGCG GGTATTAAACCTACTGAAATAGAAACATCGGCCAAAACATCGCCCTCGAT CTATTTTCATTTGCATTTGGCTCATTTGTGTCAAAATGGCTACAAATGCT CTCTTTGGTCCTTGGGGTATATTTTAGAGGTTAATCCAGATAATATTTTT TACGACGCTAACTTTCTAATTTAATAAACATAATTCATTTTCTAGAAATT GACTGAAAATGCTGAATTGCAAAGTTATCTGTCAAGTGAGGACGAAAAAG ACAATTTCATTTACGAAAACAATGCAAAATTGTCTGTCCAATCAGATTCG TGTCCAAAAGCTGGTTGCATTTGTGAAGGCTACACTGATAAAACTGTAAG AACATAACTATTTATTCCTTCCTGGAGTACTTAACACCCACGTGTCACAG TAACACGCATAGAAAATACCTCAAAATATTTATTTGAAACTACAAACTAA CATAGGCGGTTTTAGACCCTGTCGAACTTATCAGATGAAGAGATTTGTAA TTGTAATTCATTTTTTAACGAGCGTTGTACTCCTTCGCATGTTTCCGACA TACTTGCTCTATAGTCTTCAACCAGTGAACTACACAGAACTTTCATCGCC ACTTAAAAACAAACGTAGGGATGTTTTTTGGACATTCTAATTGCTGGCTA TTTTTTTTTCTATTTACAGTACAATCAAATGGTCTGTGACTCTTTCCAAT GTCCGAAAATAAACTGTCCAAATCTGAAGGTGAAACCAACTGGTGATTGT TGTGCTCATTGTGGTAAGTGAATGTCCATATTGCTTTTCAGTTTAGTAGT GTGAAGGTTTCGATCACAGACTTGCACCGCAAAGGACTGTGTTCGAATAT CAAGCTCTTCCAGACAGGGTGTTAGGGAAATATGGTGATAGACTCTCTAC CTTAACTCACATGTCTTTCTCTTTCAATCTGGCTGATAATCGAAGTATCA ATTGACGTCAAATGAGCTTAGTAAAGCTCAAATTGCAGATGTAGAACGAT AAACTCGGTATACATTGGTTTTCAGTGTCCACAAAATAAGAAATTTCACG AGTAAAAAGCGCTCTTGGTTAGTCTAGCAAGCTAGAAGACTAATTCAGAC ATAACAGTAGAAATAAAGCAAAAAGTAATGGAGGGAACAAATTTTAGTTT ATACAAACTAAATCCCGTAACAATAATCGTATTATCATATAACGCCTATA CTACTGTATTACACGCATTATATTTTATAAATGACTCCAGTCTAGCCCTT TGTGGGAAATATTGAAATTGAAGATGACTGTTTTTCGTAAACACATTGTC ATTTAACTTTTATAAACTGAAATGAGAGAGAAGATAATTTCTTATATACA ATCTTCAAACTCAGCTTATACAAATTTGAGATGCTGAGATTATAATGGTA TATTATCATATGCTTTATACCAGGATGTACTGTTGATTTCAAGTTCAATT CTGGTTTTGATCTTGAAAAATGTCAACAAGCACTGATGAATTACACTGCT CATATATCGAGAACAGAATTCGACAAAGTCCAAATCTTACTGTCTGACAG TCAACAAAGTAAGTGCAATACCATACTATTCATTAAACAGTAGTTTAAAT GATCTCAAGGTTCTGTCAACGTTTTACATTTTAAACTAAGTACGTGAGAT CGTCCAGTCAAAGAATAATAGTCTACTTCTCCTGAGTCTATAAACCAGTC TCCAGCTTTCATAGCTCGAGCCTTCTGCAACTCAAACAAAATTACTTTGC TTTACTTTCCAATGCTTATTTGAACTAGAGATACTCCACTTTCATCCAAC GTGTCAGAATTCAACGAAACTTTAATTTCAAAGGATATCGAAAAACCTAT TTTCGAGACCTAAATAGATGCCTTTCCTTCCTTTGATATCCAGTAACCTT AGCTTTAGCTTATATTGCTGGCTATCAAAATGATAACATTTGAAGTTTAA AATTTATTATTTTCTAAAATTTCCAAAGGATCAGTGACAAACGAAATGGT CGACGAAATCTCTCGCCTCCTCCAACAGCAAGGGCACCCGTGTATGGCGA AGTCGAAGAGCGTGATCAAAGGAATATGCTCTGGTGGCAAAGGATCACAA AGTGCAAATGGTAATTTGTAATTCTTCTCCAAGCTCTTTCAAATCCATGA CTATTTTCCTATTCATACATCAGAATCTTAAATCTATGCAAAATGTGATC TGTGAACGAGATCGATACCGAAAACGGTCCATATTCTTGCACATTACAGT TGACGCTTTCTAATTCGATTTTCAAGGATCAAAAGATTTTCATCGAATAA GGGAATGTATAGAATAGAAAAGCGTCGCTTATGATAGCTTCTCGTTTCGA AGAACGTCGAATGAGAGACAGTTAATTATATTTCCTTTCCATTTTCGGAT GGTGGAACAGGAAAAGCGAAACTTCTATTTTGAAGATTCTCCTGCTGCTT CTATTAGAGTGGTATCTCCACTAAATTCAAAGCTGCGAAAATGCTGACAG AGCAATGTAAAATTCATTGTTAGTCATAACATTGCAAACCTATTGAAGCT CTCCCTTTTTCTCAGAAAATGCAGGAACAATCGCAATGTCAGTTGTCATT CCCATCATCGCGTTGACCATTCTCATTATCATCCTCGTTGTGGTATATCG CCGACATCGTAGGATCGCAAGGTAAATTTTTTAACAAATTATAATGTTTT TATAATAAATCCCAAAATCTTAGTCGTCTCAATTCATCATACAGTATGTC TCACCCAAATTAGTAAAGTTAAAAAGTGATAGTTTATGAAGCCTGAGAGC AAAGCTCCAAAACGAAGTACAATGGAGTTTCTATAGCTCAGATACGATTT TGTGGAACTTATGGAAAATTTGAGTTACAGAGACTTATTTATAAAGACTT TTCTTTTATTCTTTGACTGGATGATTTCACTTGTTCAAGTCTCAGTTCAC GTTAAGAAGACATTTGAGTTATAGAGGTTCTGTTTAAAGAAACTCCACCG TATAACTAATGCAGATGGTAGTACAAGTGGCAAAACCTAAAACGATATGC TTATAAATGCCTTTGATAAAGTATAGTAAAAGCAAGGAAGAACTCTTGAA GCTTTTAATGACTGTATTTTAAATTTCACACCTCTCTTTCTTCCAGTCAA CGAGAACACAAGGAATTCAAGAATCCGGACGACATTATGGAATATCCGGG CATGGATCAAGTGGACATGCGTACAACGGACTTTATGAGTCCTTATGATG TAAGTCTAGGTTTAAACGTTAAACTCTAATGCATAGGGCTGTACTTTTAT AAGCAGCCCATTACCCTTACCGTGTGTATCGCAATATATAAATGTTAAAA TGTGACGATAGATCATCCAAATAATCATCCAAAATCTTGGTTCAAGGTTG AACCATTGAGTTTCAATCCGAAGGGTAGAGGCCAATCTTGCATAGATTTG AACGGTCAAAAATGAAAGTAAAATGAAATCTATTGCCTAGAGCTGTACAT ATATGCAGCCCAATAAAGTATCGAACAATAATTTCAAATTGATTTCAATT ATTTTCAGCACATCGTGGAAGTCAAGTCAAAGGAAGATGGTGCCCAATCC TTTTCGAATCCTTCGTATGCAGGGGTAAGTGTGTCATAGTTATAGCAATG TTTAACAGGAGAACTGACATATAATGTAATGCAAAACTTACTCCCAAAAG CTATCAAAGCGAAAAATTGTCTACATACTAATACGCTTCTTTTGACGTAT AATTGACTTTGCCTAAGGGCCCCCAGTTTTCTTGCGCTTTACAAAGAACA TTTTTAGACATGCCATAGTTACATGAGTAATTAATGCTCCCAGAGGTCTG CGTAAATGCGTGAATTGGTCTTTTCACTTGCGTGAATGCGTGAAAATTGT AAAAAATTGCGTGAATGCGTGAGTGTGCGCCACTGGTTGACCCATCCTAA AAACAATACTTCAAACGAGGATATTTCTAGAGCTAAACCTTATATTGTTC TTTAAAGATAGAGCCATTGTTTATAGGTGCCAAGAACTGAGCCTGTACAC GCTTATAAACGTTATGTTTATAGAAAAAAAAAACATGTAACAAAATATTC TCTGCATTGTCACCTTAGAATGATTTTGAAGATGGACAAGATGAGAATTT CAACCAATCAGTCGTCGATATCAATTTCAGTAATTTCGTTAATGACCCAA ACTCTAATGAGATGAAGGTTAGCACACTAATGCACAATCTTTATAGACGA TGCTATCGTCCGTTTAAGTAAACGCGGGAAAAAGTTCGGGCGTCAGGGCG GTTTACGGGAAAAAAAGTGGCGGTAGAGTTTTGGAACAAACATTTACACT GTAAATATTTCCGCCACTGCTTACTCCACCCGAATTTATCACGGCTCTCC TAAACTATTCCCTTTTTTAGTGATCTTGTGTAGACGATAGGATCGTCTAA TGTCTTTATAGCCTCTTTCCCATATATCCAAGGCTTTATTTACGTTACTT ATGAACGCCAGATAAGTAATATCCTGGCGCTATCAGTAAGCATAAAAAAG CCGATAATACACGAGAACGAGGTTGACCTCTTTCTTCATACAGTAGACTG CTCACTATTTCGAATTTCTATTATTCAAACCTCTCTATAATTCGAACTGT TTCCCAGTCCCCCCAGTGAAACCATCTTTAAAAAAACCTATCATTCGAAC CTGTCTGTAACAAATAAGATTCCTCGTCAAAATCCGAAATAGCGAGAGTC AATCTGGTACCCTTTCGGGTATTTTAAGGAAGATCAAGCACCCTTTCAGT CCTACCAGCTTCATTTTAAACACCCTGGTTTCTGTGCGCCAGTGAGTGTC AAGTGCCCACTGAAGTGAAATTTTTTCCATCAAATTTCAAATGGGGTTGA AATTGAATTCAATTACCCAGTGGACTGAAATTTAAGGTAAATATTCTTGC TGGGGTCCCACCGAGTCTGTGATACAGGGGTGTTGTAGATTTCATTCTGT TAAACAACTAGGACGCCAATATGTTCAAAACATCATCCTTTGGAAACCCA CTTTACGATGCTGTGATCGATGACAAAAAACCACCACAAAACGAAAACGA AGAAGAAGAAATCAATCACCATGGAAACGAGGCTGTACTTCAAAACGAGG CTGATGATGAAAACCAGGATAAAGAGGCAGATACGAATGTTGGTGTTGAG GCTAATGTTGGTGATGGTTCTGGTGGATTAGATAATCCATTATATTCTGA AGTTTTTGCTGCTTTCAGTGAAAAAGATGAAGAGTAAATTTTGAATGATT TTGATTGGCTACTAAGAAGACTAACGCACGTTGTTCGGCAAAGTACATAT CCCGAAGTACAATTCCGTATTAATTGGTTTTATGATACCATCCAGAAACT GTATTGAAGGGCTACTTAGACTACACAATATATTGACGAACAATATTCGA CAATATGGTTTGCGGACCGTAATGTACGAAGTAAACATCTGGTACTCTAT TATAAAAAGGAATTTTCTTTCTGTAAACAATTCCCCTTTATTGTTGAAAT ATTGCAAATCGAGCTGACAATATATTGCGGACACCTTTTCAATATATTGT CGACATTCAGCAATATATCATCAATATATTGCCTGACAATATATTGTGTA GTGTATGTAGCCCTTAACATATAAAATAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013695TCONS_00013695Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013695-proteinTCONS_00013695-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000171supercontigsc0000171:71104..81282 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AMNprotein amnionless precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.63 27.1 17.15 14.88 11.91 8.38 24.3 22.4 15.19 21.39 12.59 12.07 17.44 25.7 6.02 4.93 27.18 32.72 16.51 11.68 26.83 24.44 19.01 19.75 14.09 12.26 10.2 10.74 6.58 8.04