XLOC_007137 (gene) - C. hemisphaerica

Overview
NameXLOC_007137
Unique NameXLOC_007137
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000147:118852..122482-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007137 ID=XLOC_007137|Name=XLOC_007137|organism=Clytia hemisphaerica|type=gene|length=3631bp|location=Sequence derived from alignment at sc0000147:118852..122482- (Clytia hemisphaerica)
CGTGGTTCAAAAATACTGTTTTGTTTTTAAAATCGATGTCTAGTTTATTT
AAGATAGCGTAAATTTTATGGTGTCAGACTTGGCAAAAGTAAATCATGCT
AACTTTGATTCTCCTGGTCCTACAGTTGCATTCTCTAACCGGATATCCAC
TGAACAACGAGAGATCGTTTACAATTGATTATGAGCACAACACATTCTTG
AAAGATGGAAAACCATTTCGTTACATCTCTGGTAGTATGCATTATTTCCG
TACACCGCATCAACTTTGGGAGGATCGATTCTATAAAGCGAAGATGTCTG
GATTAAATGTCATTCAAACGTACGTGTCAAGCTTTTCACGCTTTTTCATA
AGAATGGTCATTTTTTTCATATCATCATTTCATTTTTTTGATTCAGAACC
TCCAAACGACAAACTTTCTTTCTACGCTCACTCCCCTCCGCACTCCCCCC
TGTGATATCGTTCCAGCCCGGTACACCTTTTCGACCGTAGCCACCAATTG
CCGCGCGGGCATATTTTGTCCGCTTTATCCCACTAAAACCGTCCCAGTCC
TTTTTTCGCAACTACAGAGAAATGTGTCAAAAAGGATTGGATTGAGTTTA
GGGGGATGATTAAATAATTAAGTGGCACTTTAATGGGATAAACTTTCGCG
GGGATTAAATTTCGCGGATTTCGTGGATTTGGGTGTCATCCGCGAAAATC
TGCGAAATTAAATCCCAATGGAAATTTGGAAGGGCCTCATCCGCGAAATA
TTTCTAATCAAAACTCAAAATATGTCATATAAATACTTATTGAATGGTTA
CTTGCATCAAAAAAGCGCTGATAATGTGTATTTCAACAACCAAAATGCAT
GATTTGACACTAAAAGTCACAAAATCGTGAAAATATTGCCACCCTATAGT
GCCACACGCGAAATTAAGTCCCTGCTAAATTTTTGAATTTCGTGGATAGG
CCCAACCGCGAAATTTAATCCCCGCGAAAGTTTATCCCATTAAAGTAACT
GCGCGACTACGGTCGAAAAGGTGCATTGCTAATCTGATTATCTGGCCTCT
TCATTTATCAAAGCTGTTTAAAACTGTCTCTGTGACTGAAAGAATCGAAT
CTCAAATGTGTTTTCCATTTACAATTGACTCTCGTTAATACGAACTGGCA
CGAGGAAAATTGAAACTTTTTTCGAATTACAGAAAGATTCCAATTATAGT
ATTTTAAAAGGTTTTCTATTGGAAAGGGACTGAAAACATGTTCGAAAGAT
TCAAACCCGGGGGGGGGGTACTAGGGTTGCGAGCTGACGGGGGGGGCCGC
CCGACTTTGGACCCTTACCGGGACTAAAAAGGAGAAAACAAAGGAACATT
TTGGGAATTTTACGACCCTTACCGGGACTAATTTGACCAATTTTGACCAA
ATTTCGATCTTTCAGGGGATAAAAAGTTGAAATTTTCCTATTTTTCCGAC
CCTTACTGGGACTGAAATTTGATTTTCTGATTTTTGCGACCCTTAGCGGG
ACTTTGGAAGTCCAAAAAAGGTACCCTTAAGGGCGGCACATACCGTCCCT
TCCATTTGCCTAAGTACCCCCCCTCCGGGAGTTCGAATAAGCGAGAGTTT
ACTGTATATTAACTGGAGTATTTGCATTTCTTCCTTTCAGATATGTCGCA
TGGAACATGCATGAAATGTTTGAAAATGTCTACCATTTTGAAAATGATCT
TGACATCGTTTCGTACATTAGATTGGCTCAACAGTACAATCTCATGATTT
TGTTGAGGCCTGGACCCTACATTGATTCTGAATGGGAATATGGCGGTTTT
CCTTATTGGATGAGCAGCAAAGTTGGAAAATTGATCTGAACTTCAGACCA
AGGATATCTCAATCTTGTTGACAAATGGTTTTCTGTTTTGCTACCGAAAG
TTAAACCACTTTTATATGAAAACGGAGGACCTATTATTGGTGTTCAGGTA
ATTGATAAAAGTTTTCCCCTTTGAGCTCCAAGTAGGAAAAATATCACTGG
TTAAGATAGTTGACGGTAAAAAAGGGAGTAATTTAATTAAACCGCGTCGT
TGTATTTCGCTATTACAATCTTCGTCTTTTTTTCTCAGGTTGAAAATGAA
TATGGTAGTTATGGTTGTGATGAAAAATACATGTTAGCAATGGAACAAAT
GTTAAGAAAATATCTCAGTCAAAAAGTCTTTCTATACACCACAGACCCTA
TCATTGATCAAGCTTTACAGTGTGGTTCAATTTCATCCTTGTATAGAACA
GTCGATTTCGGAGCAGGTCATGATGTGAATAAGTCGTTTGCACTGCAAAG
GAAATATCAGCCGAAAGGACCCTATGTAAGACCACCCTTTCTTTTACCTT
CAAGTATGACAGAGACTACATTGCGCAACGCGTCTGAATTCATTTTGGTC
TTCCATTTCCATTGGGTGGCATTTAGCCCTTTATCGTTATTCCGATCACT
GGAACACTTGTATCCAGTCCTTTAAATCGCGTTTTTGATTTTTCTGACAT
AGTGCTCATGATAGTACTAACATCCATCAGAAAAATAAAAAAGTGGTGCA
AATGGCTCTGGGTTAGGTTGGGTAGCATATTACCTACCAAAACCTCTCAC
TCAGCAATTCTTGCTTATATTTTACAGGTTAATTCGGAATACTACACTGG
TTGGTTTGATAACTGGGGTGAAGGACATCATGCTGAACGACCTGAATACA
TAGCACATTATTTGGATCAAATACTGAGCTTTGAAAATGCTTCCGTCAAT
TTGTATCTGTTTGAAGGTAACTTGTGTATTCAATTCTATTTTTCAGAAAG
ATTGAATGTTCATATTCATGTCATTTATAGATTGATATGTTTCAACCTCT
TCTCTATGTATCCGGCTAGGTCGCGATATATGTGTGTCTGAAAATGTCGT
TGCTTTTCACGTCTAATGGAATAAACTGACGTACGGCAAGTGAGAATTGT
CATGTATGAAGTCGGCAATTTCTCTCTCAATACGAAAATTTCATACTATC
ATACTACAGTCAGTAAAACATAACGGGATAATGCTCTTCCACATGCTATG
ATTGTGTTACGTTANNNNNNNNNNNNNNNNNNNTACAGCGATGTCTCCAT
GGCTGAATTTCTTGGGGCAAACGGGGCAGAGTGTGGCGAGCTGTGGCAAA
ATTTTATATTATAGAGAATACAGCGATGTCTCCATGACTGAATTTCTTGG
GGCAAACGGGGCAGAGTGTGGCGAGCTTGAATGTATCCTAGGCTTCATTT
ACACGACTGTTGGACGCCAGGGAATATTATCTGGCGCTATCAGTAAGCAT
CAAAAAGCTGATAATACGCAGGGAACAAAGTTTGCAAAAATAATTGAGGA
TATCTAAGGACAAAAACCACTCATATTTCAAACACTCTCGTTTATGACAT
TCTCAAATTTTGTGAAAAATAGACCAACTTCAACAGGCCTTGCAAAGATC
ATACCTGGACCTTCTTTAAAGGTTTTTTATTACTTTCTGTCCGATAGGTG
GTTCAAACAGAAATTTTATGAATGGTGGAAGTTCGTGTGTGCATGTTTCG
TTCATTCAATTTTTGACGACATTTTTGGTCAAAAAATTGAATTTCGATGG
CAATATTCAATTTTCAATTTTCGAGTTAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012726TCONS_00012726Clytia hemisphaericatranscript
TCONS_00012725TCONS_00012725Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012725-proteinTCONS_00012725-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000147supercontigsc0000147:118852..122482 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.24	14.68	9.62	8.16	2.39	1.82	1.37	1.15	3.8	3.14	3.44	3.74	4.77	5.81	8.7	14.95	2.98	5.4	7.41	3.71	6.04	3.67	6.55	9.33	3.29	8.13	2.59	3.34	14.8	9.57