XLOC_006984 (gene) - C. hemisphaerica

Overview
NameXLOC_006984
Unique NameXLOC_006984
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000144:39650..46344-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006984 ID=XLOC_006984|Name=XLOC_006984|organism=Clytia hemisphaerica|type=gene|length=6695bp|location=Sequence derived from alignment at sc0000144:39650..46344- (Clytia hemisphaerica)
CACAGAATAGAAAAAAAGTAACATTTAGGAAAAATTAAGGAAATAAAGAT GATGAATCATGGTATTGAAACCGAAACACCATCAATTGCTGGCAATGTTC CTGCCTTCTTGGTGAAGTTGTGGCGTATTGTTGGAGATGAATCATTAGAC TCGATCATCTCTTGGAGTCAGGTATATTTAACTTGTTTTTGTACTGCTTA CTATACTTATGAAATTCTTAATCGGCCTTAGCTACAAGGATTCTCCAAGC ACTTCTCCCTCCATTTACCTCCAGAGATTAAGTTTTAATACAATTGCAAA TATTGAGATATCACTCATAATTTTTGGCGTGAAGGAGAAAGAGTCTTCAG GGATTTTTGGGATTTTAGGGATTTTTCAAGCACTTTTCCTTATCACTATC TTACCTCAGAAATTGAGTTTTAATCATTCATTGATAAACTGTTGATTAAA TTGTTTTCAATTCGCTACCTTAATTTAAAAGGGGCCTAAGTCCAGGTACC CCCCCCCCCCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCAGTTCAAAAGGGGCCTTTT TATGAAATTTGAGATCTTTGGTTTTTCTCAATCTCTGACTCATTCTGGCT CATTTGCTCTCTTTTGATGTACACAACAAGTAGTTTTTAAAGTTAAAAAG GCTCAAAACTTCATACTGAAGCTCTGTTTAATTCAAAACAGGCCAAAAGT CCATCATCTTTTTACAATAAAAGGGCCTAAGTCTACCAAAATAAGTTTGT TAAGTTTTGAAGAGACCATGCATCCTAAAAAGTTTAATTATTGAGTTTTT CTTTATTTTACTGAGATTGTCTTTTCTCTTCATCTTGAGTCTAGATGTAA GTGGCTTTATTTTGGAATGTCATATGTGCAGGTTTTGAACTTTAAAAGCC AGAAATTAACCCTCTCACGTTTTTCAAAATTCATGTTTAATCTGGTTTAA TTCAAAAAAGGCCTAAGTCCACTCTGCAAGATTTACTAAGTTGCACCTGT TACGTACAAAAATATCTACTTTCCAAACGAATACCTTTCTATTGGAAAAA CAACTTATAGCTATGGCTTTTAGAAAACATTTATTACTTCAAAGCTTTAC CATCAAAAATGGTTTCGTACTAGTTATTGCATGAGTGCAATACGAGAAAT ATTTGAGTTCCAAGATTTTTCTGTAATAGCGAGCCTATTGGCGAGGAAAA ATATCGGTAAAATCTCGGATCGAGTAAAATCTCGAGTATTGCACGAAAAG TCATGTGAATCAAAAGAATCAAGGAAAAACTTTAATTGCAATTTTCTCAA AATGACCAAAATGGACTTAGGCCCCTTTTGAATTAAGGTAGCGAATTATA CTCTATACTTTCTACCATAAAAAATGCTTAAAAGTAAATATTGCTTCCCT TTTTGTTATAGAATGGTCAGACATTCAAGGTTCACGATCAAACTGCATTT GCAAAAGATATTTTGCCCAAATATTATAAGCATAGCAATTTCTCCAGCTT TGTACGTCAAGTGAACATGTGTAAGTAGGCCCATCCTTTCCATCCTCGTG TTTGTGATTCTGTTTGCAAGTAAAAATACTTTTCTGAATTATTTGAGTGA TATTTTGATCACTTTTGAAGCCTCTTATCTTCGATAAAAGATATTCTCCA ATTCTTCTTACTTTCAGACGGCTTTCGAAAGATCGTAGATGCACAAAGTG GTAGTCTGAGACACGATAAGGACGAATGGGAGTTCTTCCATCAATCTTTC CAACAAAACAAACCGGAACTGCTGGCAGAAATCAAAAGAAAGGTATGCAA AAAATGATTTCTTTTTATTTTGGAATAAACTAACAGTAACAAGACTGGTT TCTCGATAGATTTTACAAGTTCATTCCTGCTTCTTATTTTTCGGCTATGC CCTACTTCATTTTTCTGTAATTAATTTAGAATCGTTTTTATTTTGGTGTT ATTTGTTGTAGGCTTCCAATAAAGAAAGTGATGCAAAATCCAACCAAATT TCATCTCTTTTGACTGAAGTTGAACGATTGAAACTGCAACACGAAACGGT TGCAAGCAAGCTAGAAAATATGAAAAGGTAAACATTCATTTATGCTATCT ACAAGCTATTTGGTAACTTTGTTTTTTTAGCTGAATATCAAATTCATCCC GAAGTTTTGAACACTCTACATTCTAAATCTTAAAGGTTTAGACAGGATTA GTCCCCTCACGGACTTTTATGAACCCCAAGTAAAAGGGGTTAGTCTAATT TTTTAAGAGGAACTATTGTATAATAAGATTTACTTTTCATTTAGTGAAAA TGAAATGTTATGGGCTGAAGTAGGAGATTTGAGAGATCAACATCGAGATC AACAAACCGTTATCAATAAGGTAACGGATATTCATTTCAATTGCTTCGCA GATAGAAACAACAACTATTTCTTCGTATATTTTCAGCTCCACTTATCTTA GGGGTTGAGATTGAAGAGGTAGTATTGCTTGTTCATTTGCTTATTAAATA CTTGAATACTCAGGACCAAATTATGCATGTGCATCTACGATGAAGTGAGT TAAAGTGAAGAAGAAGCTCACTTCAGGCACAATAATTTGAAGTCTTTATC TTGAGTTTGACCTTTTTTAATGGAAATCGGAAACGAGCTTTCTTATTACA TTGAGGTTTACAAAGCAATTCAATTTCTTTCAGCTTATCCAAGTCTTCGT GAAGATTGTAATGTCCAACAAGAAAGATAGAGGGGGAAATAAAAGGTATC AATTATTGCTCATTCTGATACCGTTATTTCAGCTGTTTTACGACCGATTA AAAAATTATTAACAAATTATTCCGATTAAAAACCGGATAATTTTAGTTAT TTCCGTTCTCTGTTATCGAGTAAATTTTCTACATTTCCTCTTGCAGGATA TCAAAAGGCCTCATTTTGTATACAATGGCTTTAAATTAGTAAAAAATTTA AACTCGATCCTTGTTTTGAGCTCGATTTTCCTGTCTATGGAGTTTAAATC AATGTTCGAAATATACTCTTTTTTCCGTAAACTTTGCGAATTTTTATTAA ATAATATTCATCGAAATGTAGTTTACCTCCGTATTCTTCTAATTACCATA TGCTTGTTTATGTGTTCTATAGTCGAAGATAATTCTCCAATTTAGGCGAG CACTGGACTTTCCTGCAGCACTGGATAACAAACACGCCAAAATGACTCAA GATCTCCTACCCTATTCATCTAGTACAAATCAAAATATATATCCAAGTTT ATCGCCAGATCGAATGTATTCCGTTGAGTCGGTAAGAATGCCCGCTAATG ATGGTTTAAAAAAATTACAAAAAAGTACCGAGGCACTTTTAGCTTACTGC ATTTACTGTTGTTAGACGAAAACCGAAAATGGCATCCTCAAAGTAGACAT CATGTTTAGCAGCACCACATCACCGATGTAAATTATAATGTATCTCTGTA GTACTGGGGTGCATAAATAAGAGTGACGGTATTGTTACTGTAAAAGTGAT CTTCACTTTTTGTAAATTTTCCTTAGCCTGGTTCACCGTATCCGATCACT GAAGTTCCCACTCCAACCAATGCTTCACATTTTGACAGTGAGTTTCAATT CCTCGATAAAATTCGACTGATTTTTGCTGGGTTAAGTTGATCCTTGTGTC TTTCAATTATATCAAATCGTCTTACGGGTCCAACCCATTTGAAATTGAAT ATTGAAATTAAATTTCAAAACTTCAATTAAAGCCGACTTCGTGTTTGCAT TTTGCCGATTACTCTACTTGGTAATTTATGCCAGAAGATATTCAAATTTG ATATTCAACATTTTTTCCGATCTCAACCTTCGCATGAAAGTTCATCGCTT CTTTTTTCTCAGATTCTATGATATCGGTGATTGATGATTCACCAATGCCT CTGGTAGAAGAAATAGACAACAGCTCATCAACCACCAACCCTATATCCAA TATTTCTTTTCCCTCTAATGGAAAACAACCGCTCGTTGTCAAAAGTGAAG GAAAGACGATCACTATCGTGCCCAACCAACCTTCAGCTGTGAGCAACATG CAGATGACGGCACCACAAATGAAATCGGAATCAGATTTTGCTTTTCCAGA GAAATACAATGGACTGTCTGCAACCAGCAAGTGTTTGAACACAGATATGT CACAGATGGGCTTTGAAGTTATCAAATGTATGTCCAAAGACAATCCATCC AACCATTGTTCCGGAGTGAGCAGTGGTGATTGTTCAGTGATTCCAGCTGA CGAAGACATCATTACAGTGGTCCCCAATGTTTCCACATCATCGTCAGAAC CCTTCCTTTCAACACCTGACACTTTACTCCCTCCAGCTCTTAACAACACG CCACGCAAACATGCACTCCCACAAAAGTTTCAGCAACAAAAAGAAGCTCA CCCAGTGACGTCAGAAATGAGTTTGGTCCCTGTTGCTCCAATCTTAAAAA TGCCGCCTTCGGGTCGATTATACTCCAGACAAAGAAGCTACAAAGACAAG TATATTAATACTCCGAGTTTCAATACACGTAGCCAATTTTCAATGAAAGA TTGTTATTATTGACCTCTCAATATTCTACCACCTCATTAATTATCCAGAA CTACATACGAGGAGTTGTCGATAAAGCACCCTTCGAGTAGTCTTACCATA GTTAATGTTTAGTTAGCGGAGTCTGATTTCATCTTCTGATTTCAAGATTT AACAATTTCTCTTTTTCTCTAGGCAAGAGCTCAATGAGAACGTCCAAAAT ATCGGTCGAAGCATCGAGATGTTACAAGGTCTTCTTGAAAGCCAGCCTGT CAATATTGATGTCAAAAGTCTAAATGTAAGAGTGCTCTATAATGCTGTTA AGTATGCACATCTTTTTTATTTAATGTGGAATGAGTCTATTGGTCATATT TCTTTGGTGGCTAATTGCATGTTCACCAGAAACGATCACCATTCGTATGG AAAGATTATAAATCTCCTATCTTCCTTGTGAAATTCAAGGCCAACTTTTT GACACATCCTTGAGTCTTTCATGAATAATTTGATGCCGTGTTTGAAATTA TTTCTTTTTGTTTTCTTTTTTTTTTAGTTAGACTTTCTGCCAGAAAACAT GACAATACAGGTGAGCTTATTGTTTCGTATCTTCATGCCTTCTATTTGTC TTATCAAAAAAGAAACTGAAGTTGTATATGATTTTTAATTTTTGATAATC ACACGGTATCATTCATAACATTACTGGCTTTGTCCACAATTTGTGGGTTG GAGCTTTACCAGTTGCTTTTTCATCATTTTGTTAACCGATTTCTATGACT ATGAGATAGGAACAGACAATTTTAATGTCCGGTTTATTCTAACAAACTAG AAACTTGATTTCTTTTTTCTTCAGGACGTTGCAAAGCTAGTGGAGAGTGG AGGTGCCAACCTGACAGTGAATGCTATTACTGAAGGGCCCAATCAAAACA ACAAAGGTATGTTAATTTTACTGATACTCTTAGAGAACAATACAGTTGGC ACTATACACACTTCAACCACACTGACTGACAATTTTCACGTTTAGACGAC TCCTCACCTGTATCGNGAGTTGGCACTATACAGTTTGTTATCAGTTTTAG ATATCAGATTGTTAGAAGTTAAAATATGCTTGAGCTCCTAATATATTTTG TTCAGCTTAAATTTGATATGGATATCGGATTAATTTATTTTTAAACACGT CGATATCACATCAGCCGTCGACGACATGAGCTTGTTAGGCATACCACGAA ACTGTTGAGGTTTCTAATTCCAGGAGAAACATTTCTGGTGTATTTCCGGG ATCCTTCCGCTGCTTTCATTGGGAAAACCAGCTAGAATTAGTTGTCTTGC TGCGTACAAAGGTCTAGACAATATCCTGAGGCTATGCAGGTTAGTTGAAC TGTTCTACAACACGCAGAAAGCATTATAAGTTTAGCTCCTAGGAAGTAGA TGCAGACTCAGTAGTTAATTCAACCACACTGACTGACAATTTTCACGTTT AGACGACTCCTCACCTGTATCGCCAAGTGCATACATTGATCCGCAATTTG AGATGTCGAGTCAAGATTTCTTCGACAGTGTTCTCGATAATCAATCCTCA AGTTCAGCAACTTAGTCTTGGTTAACCCTAACGACGTGATATGAAGTTGT ACTTCGAGCGGTGAAATATGCTGTGACAACGTTGCTGTCTACCCAGCTTG GACCTCAGACGTTCGAATATGAGAGTTGAAAGCTCTCCTGGTGGGTTTGG AAGAAATTAAACCTTAAAATTGACTGACTTTTCAGTTATGGAAGATAACG TAGGAAGTTCATGAAACGGAATTCTTAACTATCCAAAAGGAAGGACATAT AAAAGAGCAAGAGAACTTTCCAGATCAGGATCAGCTCTTACAAAGTGATT TTTCAAGGTCATTTATTTCTGTAAAGGATTTTTTCCTTAATTGTTTTTTA TCTTCTTACCTGAGACCGATATACCGCTTTACCTATTACTCTGTTATTAT TTGAGGTTTTTGTATGCAAAATTGGTTGAATAAACTCAAAACAGAATTGT TATGCAAGAGATTTCGTGATAACAAATACACATTGATTATTTGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012437TCONS_00012437Clytia hemisphaericatranscript
TCONS_00012436TCONS_00012436Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012436-proteinTCONS_00012436-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:39650..46344 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.59 19.24 8.95 6.88 39.65 31.77 29.38 34.93 20.75 25.99 25.46 16.16 19.19 17.29 14.75 19.74 26.16 23.53 13.34 18.72 21.07 21.66 28.31 28.53 26.8 30.82 13.17 13.63 18.16 20.43