XLOC_006962 (gene) - C. hemisphaerica

Overview
NameXLOC_006962
Unique NameXLOC_006962
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000144:159441..166489+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006962 ID=XLOC_006962|Name=XLOC_006962|organism=Clytia hemisphaerica|type=gene|length=7049bp|location=Sequence derived from alignment at sc0000144:159441..166489+ (Clytia hemisphaerica)
GTTTATTCCAAAAAAGTTTTATCCTTATGGACTAATTTGTTTGACCTTtg attttttcctatttttagcaaaataaaaataaaagtaataaaaacaatTG GCTGAAATAATGTGTACAACAAAATAATGTGTAATTGTTGCGGTGGGGAC AGCTACCACCCAAAAAATAAAGTTGTACCTGACGAAGTTGGTCAAGCACA ATATGGCCGAACAAATGGATTAAGCTGCCCTTTGCACCCACTTCAACTCA TTGGATGGTTCTTCATCACATTGTTCGGAATAACTCATTTTGGTATACTT GTTCATTATCTTCCCTCTGAATGGGTGCCATTTGGAATCATCGTATCTTT TCATCATTTGTTGTTTCATTTTCATGCtaattattttattagtttGAGGG CCAGTAGTCAATTATTATTGATGATGATGACTTGATTCCCCCTAAAAAGA ATGCCCTGTCCGGTATCAAGCAGTCTAGGAGTTGTCTTGTTAGAAACGTC AGTGCTATAGTTTTATTCTGCCTGCATTGATCTAATCATATATTTCATTC TACATACAAAGGTTTAAAGCCTTTCCTCAGAATATCATATCCTTAACtta cctttaaaaaaaagtttcctgCATGTGGCTACGTCATTCATTTGTTTTAC CACTTCTTTGCTTTGATTTTGGACCCAGCCGACCCTGCTGTTCGAAGAAA AGGAAGCTTTTTGAGGAAGATCTTTGATCGATCCAAACATACTCATGTCA TTGAGAACAGCTTCTGTTACATATGCCAAACACAAGTGTAAGTAATGTTG CTTCCTTCAGTACCTGAGTACTATTGTATAAAAggtgaaattcagaaaag aaaatcctgtgaattattttttaatcacctactctcgggtacctaatagc cggggggttggaataagcggggggattggaaaaaatctcaaaACTTAATA AGCAGGGGGGTTGGAATGAAAATGTCCTGGGTGGAAAACTTTTGAAAAGG AGGCTAATACAGCTAAATTAGGACAAAAGAGGGAACTTTCAAAAACATTT TCCCAAAAATTAATAAGCCGGGGGGTTGGAATAAGAATGTCCTGGGTGGA AAATTTTTGAAAAATTAATTAGCGGGGGGACGGCTATTAGGTACCCGAGA GTACGTCATCTACAAAGGACAAAACGGATACTTGAGCCTGCCATTCTGTA AGGCTTCTTGTAATCATGATGGAAAACATAAACCATGTTTTTCCATTTTC AGATCTTCTCGAAGCAAGCATTGTTCAGCTTGCAATAAATGTGTATCAGA TTTTGATCATCATTGTAAATGGTTGAATAACTGTGTGGGTGGCCGAAATT ATAAGTAAGTATTAATTGTATTCATGGTTCTGTTGTTCTTACTCAAGTGA GTGCCTAAAAGATTCTGATGGATTCATCTGgtatattcaaatttattttc atgtttATCTGATATTCAGATTGCGAATTGGCGGCCCCACGCTTAAACTC TCAAAGGAGTGGGCCAATATCCCATTGGAGAGAAATAATAGTGTAATTTA AACCTGAAAATAATTCAATTAGATCCGCCAATCCACGAAAATGGGGGATT GGATCCAGGCGCTCACTACAAAATCCTTTGATGCAATTCTGCAAAATTCC CTAATTTAAACCTTCTAGATGAAgaaaaatttctgcatctgggtgccaga taatgtTCGACAATGAGCTAGATACTTCTTTCACTGCTTGAAAATGAACT TAGAGAAATGACAAACAATAACGCCTGGTAACTCTATACAAAGTACTTGT TTTAATTTAGGTTGTTTCTTGGATGCTGTATCTCAGCTATCCTGACAGCT CTGTTGATGTTTGTCATCGATTTCTACTTGATGATTGCTTATTACACTGA CCAGGAGAATGTTCTCAAGCGAGCTGGTAAGTCATTggcgcttatttttt ttagttttatttgatattttgacAGAAAATTCATTGAAGTAAAGCCTCTT TACTCTTGTTTCACCGATGAAAGCGACATAACTTAAGTTTCGATGTTAGT TTTTAAGTTTAGCCTAGGAATATATTCTACAATCTTACAAATAATgattt ataatattttactttAGTATTGAACACTTGGCAGTTGTTTGTTCCAGTTT GCAAAGAAGCATACATCATTTTCGTCATCGTCAATGGATTATTATTATTG GTTGCAATGCTTCTCATTGGTCATCTACTGCTCTTCCATTGTTATCTACG TAAGTTATCTACTTTTTATGTCTTTCTGAGATGTTTttggttttatattg atttagccAGACCTAGTCAGTTAGGGTACAAGAGGAGTTCACATAGCTAA GTAATACAATAATCTCCTCTATTCTGGAGGTATTCAGACCTACCTCGTGt taacaaaaaaacattttcttcggtATTTCTATTTCATCCAAGTTCCGGGT CCAAGTTGTCTAGTAATTGTAATCTTCTGTAAAATTATCAAATTGTGAAA TTCGCAACTTCAACAGTGTACTTTTCTTGAAGTGACTGTGAAACAATCAT TACTGATTACTGACTTCAAACCTTTCAGTTTGCAAGAACTTGTCTACGTA CGACTATATCATGCAGAGCCGAACAGCCACGTCTGCGTCCAAAGCTTCAT TACCATCAGACGTGGAAACAGGAGACGAGCCTGCACCACCAGTACTCAGG CCACTATCGGTAAGATAATGTGGTGATAGATTAGATGGATAATAGATAGA TCATTTTAAAAGCGTGTTTGCTTTCCAATCTGATTTAGGCCTTTTCAGAA GTCTATATACTCCAAGTGCATCAATCCAGGCTACCAAACTTAACAAAAAT TATACTGAAATTAAACTTCAACACCATTGCTAATGAAACTGTTCATCGTT GACTTCAATTATTTTGACATTTCAGTCACAATCGCATACATATCAAGAGG TCGATGATGTCCGTAAAGAAAAGAGGTAGGGCAAAGTAGATTTATTAAGC TGTTTTCTCAAGCTGCCTTCTCttatcaaatcattttttaatGCTGTAAG GGTTTAATACTTAATTTAGATAGAAATTTTAGGAATTTGGCTCATGTTGT TTTAAGGCCAATTATTTCTCCCGTTGCACCTTGTTCACGGATAACGACAC TTATTATGTTTCCACCGATACGTACTTTTCAGTTCTTACGAGATGACCCA CATCGAAGAAGACAAAACGTACGTCAAAATCATCGACAAAACAAAACAGG TAATTTCGTAATTTTATTTAATATGATATTATTGTTAGCCGAATagtaaa catttaaaatttcaagGAAGTTGCTTTTTTATCAGAAACAATGTccgttc aatttttttcatacccATATCcaattttcctgattttttgtaagTTTTCT AGATATTCTTTCTGTAACATATCTTGACAAAACTCTAATCCAGTTTTTTT CCAGTCTCTCTAGACTTTGATTTTAATACGTTGCTTTTATTGACTCTTTC CCAGCCTTCAACTGAACAACCTTTACCAGTGGTCGAAGAAATAGTCACCA ACCAGAACGTGACAGTCGTTGAGACAGCCATAGATGTCGCAGACAACCAT CAGCAGCCACAACAAGAAGAGGAGAGACCGCCTTCTTCAACGTCCTCGGC TCAcaagaagaaaaagagaaagaaggAGCGTTCTTCCAGCAAGATTGGCC TCATCCGCACTGATGACGACGAAGACAACGACTCTTTGTCTTCTGCACGA TCCCATAATTCATTGCGATCGGCTGAAGAAGAACGTTACATTCAAATGCA GAACGAACGCGTGATGCAGAATTTCCAAGTCATGGGTGCCAGTACACCCA ATAGCGAGCGCGAAAGTAAATCGCACCCTGTTCCGTTATCCGAGGAGTCT GCGTACGAGAATATGAAAGAAACGACACGAATCGAGTCTGTTGCCTCTAG ACCTCGATCTCCATCACCGAAACAATCACAGCGCATTTCATTTGCTAATC AACAAAACGATTACGTCATGCGAGTCGCTGATAAACGAGCTTCCAATAGT TCGTTGTCTACTCTGGCGCTTCAAGATCATGACGAAGTCGGACAGCTCAT TGCTGTTTCTCCTAAGATACCATTATCACCGCATCGGGAAGAATCGTTCG AAAGTAAAACGTCATCCAAACGTAGTAGCGCTCCCTCTGCTACCAAATTG ATCGAAGTATCCAGTAAATCGTCCGGAATCGAAGCAGACGCTGATATCAT CGATGAAGAAGACGAAACGAAAGACAGACCAGATTCACCTGCTATCAGTC TGTCGGCCGTGCGTCCGTTAAGTGGTCGCCCTGAATCAGCCAAAGGAAGT GATATATCACGTATTTCACTATCTAAAGGAGGTCGTTTACAGAGTCCTCG AGTTAGTGTAGTCTCAGAGATTACGAACATCACATTAGCCTCTGAGAAAT TTGGTACCGAAACAGAGTTAACAGGAGCTGTTCCCGTTGACGAGCAGAGG CCACAAGATCTTGTTTTGAAGGATGCTTTTTCGGAGAGTGCAACGCTTGT GTTTGAAGACGAATTCGCGAACGATAACGACCAAAACATTGATTTCCTAC AACAGTCTATATTAGCGACCGAAGAACGACAGCGTGCCTCTAAAAGTCCT CCGAGAGACATACCAGCTGAGGAAAAGAAAGCTCAGGATTCAGGAATGTT GAGTGACGCTGATAGCCAGAAACTGGGCAAGTACGTTGACGCTTTTAAGC GACGCAGAGCTTCAGATCAATATTCCTTTGGCTCTGATTCTGCGGAGTCA GAAAATGGCGTGCCTTTGGCTACTCTTAATGAAGACTCGGACAGTTATGA GCTTTTGGACACATTGAAACGGGTAAAGAAATTGAGTGATGCTTTCCCCA ACGCTATCGATCAAGAGAAATTAAAGAAACGCTCTTTACCTACGCCCAAT TTCAAGAAACAGGAATCTATGTCTGAACTCTCTGTGGTCGAGTACAATCg aaagaaaaagttgaagaaaaaacgCCCTGGCAGCTCAACTTCAGGTGGAA AACACCTTCCACCCATTCGAGGGCGCCGTCCTTTGGCAGGTGTTGAGGAA GAAATGCATGCAAGCGATACAGACGatatgatttaaaattatttcttaAC GAGGGAAAGTTTGTTGGTTTGttgaaatttccaactttttttgTATATCA TTAAGAGTTAGTTGTACCGGCTGCGCCAAGAAAGAATATACACGTTTGTC AAGATATTGCaaatataccaaaatttaaggtTAGGTTTCCTCtatagaat aaaaaaagaatctgcaaaaatattttaccataagctcacaatatcttgac aaatatgtcgtcgcatcaaaataaaaaagctttaagtcaattttttggaa aattgagttatgaccatACCGATGCTTTAATTACACCCTAttattttatc gatttttttggcttaaatctATCAAAAACTAACCTAAAGTAACctaattt taaagcttttagaaaaataagaatgttacttttcactttattttcaggGT AAAAAAGCATTAAGTCACATCAGTTTAGGGCAAAAAGTCCAGAGTGGAAA CAATTTTGGACTCAAGtattttttaacacaaaaatatttcaaatgttaaT GGTTTTTCAGGATTTAAGGAGAAATGATTTAAAgtcgattttctcaaaac aacaaaaaaggacTTATATTTGATGCGATGATGTATACTTTTTCTTAgtg cagtgcCGTAGGAAGCAtttccatattggggggggggggtgaagtttagt gacaccgcgagggccaaccatggtttggcccaagggtgaaaattttgaaa atttgagctctagattgcttgaaaatgcactcaattgtgacaattatgac aaattaaaaaaggaaaactttgcattttgccaaataaccatttttgaaaa aattattggtacGGCACTGTAGTGGACCCGGTATGTATACAAATCAGTTC GAATTTTTCtcttcaaaacaacaaaacaagaCAGGACTCCCAACGTCATT CGTAAAAGCAAATTTTAATACAAACTTACTGTTTCCTTTNAACAAGACAG GACTCCCAACGTCATTCGTAAAAGCAAATTTTAATACAAACTTATTGTTT CCTTCCCTCGTTGTTAGATGTTTATGTTTGTTCaaaaaggtttttatttt taaatttcaaagcttgagaaactttttttaaattatcacACATATTTATA TTGTAAATTGATTATCGAgaggttttattttttagaggtttttaatttta gttttttctatgAAAGGACTGGGAAAAGTTGAAGTTTTTCCGCATAATTT TGCGGAAAAACTGGGTTTTAGAGTACCTTAAGATTCTTCAAGTTTGATGC GCGTAAGTATACATCCATGTTAGAAAAAGCTGATTGATTTTGCTACCTAT GACCTTGATGCATTCGTAGCAAGTTCATTATCAGCGATGTCTATCAATCT AAAACTCGACAAATTGGCCGAAGTCCTCTTATTCTCTTATACAAGGTGTT TTTGTATAAAtagatctttttttctttctcatatAATCAAATAAATACAC CTCTATGTCACAAACCTGATGGACCATAGCACCCCCTTCTCATCGTAAAA GTTGCTATTCTGAGCTTTAAATTGTAATTGAGCtgtaaaaatcgaaatcg aaataCCCATTAACACAATTCGAACATCTTTTATCTCAATTCATATTAAG CTCCCTTCATTTTCTGCCACTACCCTAAAGTCATTATCATCAGTTTAGTG AAACAGTAGTGTGTCATTCTATTGTCATATGTTTATCCTCAAATTTTCAA GAACTTGAAACATTCTTGGGTGCTATGTGGTAATAGGGTGACCAATTAGc gtaaaaatgaaatgaaaagtaaatgAAGTCATATATTTTTATATCACGAT GTATGTAGAGATTTTTAGTTGATTCTTATGTAAAAAGACACTTTATAATC CTGGTTTGTGTGTGAACAAAGGTTAACATACAATGTAAATAAAACGTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012382TCONS_00012382Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012382-proteinTCONS_00012382-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:159441..166489 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.48 1.52 1.02 0.9 20.57 15.16 11.67 13.15 8.51 10.69 9.38 8 13.07 11.82 3.09 3.26 5.37 5.78 21.65 25.77 7.57 10.55 4.9 6.2 16.49 14.26 11.76 10.88 9.07 9.82