XLOC_006959 (gene) - C. hemisphaerica

Overview
NameXLOC_006959
Unique NameXLOC_006959
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000144:32839..36950+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006959 ID=XLOC_006959|Name=XLOC_006959|organism=Clytia hemisphaerica|type=gene|length=4112bp|location=Sequence derived from alignment at sc0000144:32839..36950+ (Clytia hemisphaerica)
GAGCAACAGAAAAGAAACCACATTATCTGAAGCAAGAAAAACACCTTTAT GCATCAACGAAATAGAAACTGAATGAAAAAGGAAGAAACTGAGaagtcag aaaaaaaatcgaagaaGAGAAAGACTTTATAGAGTAAAATTGCATTTAAT AGTTgatgttttaaatatttgacCATCATAAACTAAAGACCAGTAAAGAG GACAATCAAAGCCGAAATGGAACTAAACCAATCGAGAGCTCAGTGGAATT GTTCAtcgaaagaagaaattttgcacGGAGTGAACCTCAATCTGACGCTA CGTCAACAAGAAATTATTAGTTGGTTCAGTTTTTCACTCTCCTTGCTAGC CTGCATTTTCAACTTCATCATCGGCTTTTTGATGTATAAACAACGTTTGT ATCGAAAGAAAAGTTCGTGGAGCACTTTAACCTTGATTGCCAGTGAGTGG CTGGTGTCGCTCATTGTACTGGTCTTACACTTCGTGAAGCATAAGAACAC TTTTTGTGATGAAGGGACATCAAGCTCTCCGcaaatcatcattttcaccA TCGTGTTGGAGACAATTCCAACAGGAGTGCTCCTCTTTACTGCGCATGAT CGTTACATACGACTCAAAGACCTCATCAACTACTCCAGTAATTTCAACGC AAAGCGATTCTGGATGCACTATTGCTGTTCATTGTTACATTCGGTCCTCT tgggatttttctttttgaatttaccgaattattggttgataatgccaTGG ATTCTGATTCTGTATTTCCTGGTCATCTCCATCTACGGTTGTACCATCTG TTTGAAGAGTTACGAAATCACCAAAAACCATGTCCACGAATATTCGACAA GACTTCTAAACAAACTTCGTAAATTGATGCGTCTACACGTTCAACAAATG TTGTTTCTTTTCTTCTGTCATGCATTACGTGTTCTTCTCTTAGCCTTCTC ACTTTCCCATCTTTTCCCAATGGTGGCTTATTCAGTACTTTTCAATACAA GCATCCTTCTAACGCCCTTCATTTCCTTCTTAAACGCCCTCACCCTTATA TTGATGGACCCATGCGCACGAAGACTGGTGAAGAAGATCTTCTCATCGCG AAACACACAACAAATCGCACCAGTAGAGGACAACAGACAACGACAACACA GCCATCCTATACGACCTCCAGCTGTTCTTTACTTCACCAAAAGAAACAAC CCACAAGGAGAACCTTCTCATATTGAGCTTGGTATGGGGAGAAGAGAAAT ACGAAATAAACATGAAGATACAAAAACCTCTCCCAACCTTTCAGAAATGA GTCATAATAAACATTACAAGATAAATTTGTTCCGAAATGTTGCCGAAAAA TTTAGCACTTATTAAAAGATTTTGGCGGGAAGCGTTTAAAAACGATTTTG CAGTTTTATTTTTACGTGTGTAAATAAATTTCATTGTGGATGATAAAATA TAGCAAAGTTTATGATTTTTGGTTTGAATATTTTACTCTAGGGTACCTAA TGATCAAACTTNNAACCAATCGAGAGCTCAGTGGAATTGTTCAtcgaaag aagaaattttgcacGGAGTGAACCTCAATCTGACGCTACGTCAACAAGAA ATTATTAGTTGGTTCAGTTTTTCACTCTCCTTGCTAGCCTGCATTTTCAA CTTCATCATCGGCTTTTTGATGTATAAACAACGTTTGTATCGAAAGAAAA GTTCGTGGAGCACTTTAACCTTGATTGCCAGTGAGTGGCTGGTGTCGCTC ATTGTACTGGTCTTACACTTCGTGAAGCATAAGAACACTTTTTGTGATGA AGGGACATCAAGCTCTCCGcaaatcatcattttcaccATCGTGTTGGAGA CAATTCCAACAGGAGTGCTCCTCTTTACTGCGCATGATCGTTACATACGA CTCAAAGACCTCATCAACTACTCCAGTAATTTCAACGCAAAGCGATTCTG GATGCACTATTGCTGTTCATTGTTACATTCGGTCCTCTtgggatttttct ttttgaatttaccgaattattggttgataatgccaTGGATTCTGATTCTG TATTTCCTGGTCATCTCCATCTACGGTTGTACCATCTGTTTGAAGAGTTA CGAAATCACCAAAAACCATGTCCACGAATATTCGACAAGACTTCTAAACA AACTTCGTAAATTGATGCGTCTACACGTTCAACAAATGTTGTTTCTTTTC TTCTGTCATGCATTACGTGTTCTTCTCTTAGCCTTCTCACTTTCCCATCT TTTCCCAATGGTGGCTTATTCAGTACTTTTCAATACAAGCATCCTTCTAA CGCCCTTCATTTCCTTCTTAAACGCCCTCACCCTTATATTGATGGACCCA TGCGCACGAAGACTGGTGAAGAAGATCTTCTCATCGCGAAACACACAACA AATCGCACCAGTAGAGGACAACAGACAACGACAACACAGCCATCCTATAC GACCTCCAGCTGTTCTTTACTTCACCAAAAGAAACAACCCACAAGGAGAA CCTTCTCATATTGAGCTTGGTATGGGGAGAAGAGAAATACGAAATAAACA TGAAGATACAAAAACCTCTCCCAACCTTTCAGAAATGAGTCATAATAAAC ATTACAAGATAAATTTGTTCCGAAATGTTGCCGAAAAATTTAGCACTTAT TAAAAGATTTTGGCGGGAAGCGTTTAAAAACGATTTTGCAGTTTTATTTT TACGTGTGTAAATAAATTTCATTGTGGATGATAAAATATAGCAAAGTTTA TGATTTTTGGTTTGAATATTTTACTCTAGGGTACCTAATGATCAAACTTT CATAAggaacttttgaaaatattttcataaaatataatTGGGctgatttc acaaaaatatatttagcACCTGTGCCACTGTCACCTTCTCACTTCAGAGG ACTACTTCATTTGGTTGAACGTTGAACAACAAGATAAAGTTATTTTATTC ATTAAAAATGACATCAGTCTTTCTCTAGATCGGTCAATTTGTGTAGCATT CATTTTCTTTCAGAACGCTACAGAACCGTTAAGTTTGAGCAGAGAAAGTC TATAAATTTGTTTCATATTGACTTGTCATTCCATTGTTTTATAGCAAGCT TGTCATGAAAAAGAATCAAGTCAATGTACAGCAGCCTTTAGACATCGTAA AATccaaagttcatttttattacattttaaacAAACGGTTCCAAATAAGG TTTTCTTTGTCTTGGTAATTGTATGCGTTTTTCCAGCAACTCGCGGATCA TGTTTACAACCGCTACACGTTCACCTCGTGTATTTGGTCTCTCCCTCTCT CATGACATAAGCAGCTTGAATCGACCAGCGATGgagtttttcttctttct ggAAGAGGTAGGAGGAGCTAAAGGCACATTATAAGAAAGTCTCGTTTCTT CGATTATCATATTCTTCAACTTGTTGATATTCCAACCATACTTTGCACTG ACTTCAATATACCGACATTGCCATTCTTGTtccatcttataaataaactg CTCCACATCGAATTTCCGTTCACCGTCACCTTCCGATTTGTTCCCGACCA CAATGATCGGAACTCTATTGTTATGATAATCATTACATTCTCGCTTCAAC TCCATAATAGCGTTGTAATAGTTTTCCACCTCGACTATGGATTTTTCATC ATCTACGGCAAAGACCAACACGAAGATGTTGGCACGTTGGATGGCCACAC GTTTCATGGGAGGGAAGCTATGGAGATCACAAGTGTTCATGATGACAGCG TTGGGCATCCCTGGCAAAGGCAGTGTTTTGTTAATGCAATCCTGTATGTT CTCTTTAGCGCCGTATTGGACGAAACCATGGCCGACGACTTGATGAATAA GGGACGCCTTGCCAGTACCTTGCCCACCGAGAAAAGCCACTTGTAAACAG ATGCCCCAACTGCCGACGGATGTTTTACGACTCATCTCCTTCAATGGTTT GATGAGGTTTCTTTCCGTGATCCAATATTTATACAATGTTGTTGTTTAGT ATTTTAATCTTTATGCTAATAACAGAGTAAATAGAAAGTTAAAAAGGTGA TCACATAACAAGCATCTTCTTGCTATGTGACCTGTTCATTGATCTAAATA TACACACAGGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012352TCONS_00012352Clytia hemisphaericatranscript
TCONS_00012353TCONS_00012353Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012353-proteinTCONS_00012353-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:32839..36950 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08 0.04 0.02 0.08 0.24 0.17 1.27 1.54 1.77 1.22 1.8 5.48 4.19 4.41 0.32 1.16 0.66 0.38 3.55 2.34 1.3 1.29 0.86 1.13 0.96 1.33 0.24 0.12 2.27 1.52