XLOC_006907 (gene) - C. hemisphaerica

Overview
NameXLOC_006907
Unique NameXLOC_006907
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000143:336190..341572+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006907 ID=XLOC_006907|Name=XLOC_006907|organism=Clytia hemisphaerica|type=gene|length=5383bp|location=Sequence derived from alignment at sc0000143:336190..341572+ (Clytia hemisphaerica)
ttttgGCACCCCAAAAGCTTTCTTGAACACTTGCGCAGAAAGCGCTACTG TCATTTTTTTTCGCAACCGAATTCAGGTCAGAAAGAAGCAAAGTTGTTGA GGaaacttgaattaattttgaCACAAAATGGCTTCAAAATGTACTCAACT TCTTCGACAGACATTGGGAAAGCAAGGAAATGTAAGTTGAtcgtattttt tatttgaattgtgTTCTTTAAAGGCTTGTAAACTTAGACCGTAGGTGACA GATGGAAGGCTATGAAACACTACTATCACTGcaataaaatgaattttaga TTAGAAACTTTGCAGTTTAGAGTAACAAACAGCTACAGTActccaaattt tagttgactgGCAGGTTCTTGTTTCAGGAGAGGTGCCtatcatgattttt tgctaaaaagcctGGACTGGACGATCCAGATGAATAGCAAATAGCAAAGT TTTAGGGGTCACGATTATCGTTCAACCTTTAGTAGTTTTTTAGATTACAT TTTGGAGCTCTATTTTTTTAAGATTCTGTACAAAAGCCTCGCGCCATCTT GTAACATCTCCATGACGGCACTATTAAAATCAATAgtgtttcacaaaaaa aatatgCGTGGGAAGCTTGGGGCAAGAAGAGTATTTTTCTGTATGGCGAG CCGTAGGCAGGGGTCATTAACTTTTTTATTAGCTTATACCATTCAGTTTA GATGGAACTTTGATATTccaggattacgattttaccagctttttagctat ttttcctcgctaacagttagtcacactagcttcccgccaaaatgtgtatc aaagattaatgctgcgagtgcgctatatcgtttacttgactctcaagcaa aaaaatgcgccccaaaacttctaaagggattcatgaaaaaataacccggc gctttttaatgaaattaacattttcaaaaacttcgagaaattgcctaaaa tttgagccatagatgaaaaaatttgagccaagccaaccttgaaaactaat ttgaagatcaacttcccaagaaaaagatctacgggggagggggaacccac ctagatccgtgcACCGCCGGATTGgctatttcccagaaattttgtcggac ctcaaacaatgacccataatttacatgtgcggaattgtttttactttagc gtataaactaggccttaaaaataaaagcgctgtctcgggaattgaatgac aaattttggttggttgattttggctgctgcacgttttattttgtttcaaa ctttcaagttttaattaattgtcttgCGAACTTGATTCAGGCAACTCTCA TCCTTGTTGTtgcaaatacatcctgtagtgtgactaactgtcagtgatgc tggaacttcgatttttgaggattacaattttaccagcttttcagCGAATT TTGCcccgctaacccaaatctcgcaacctctttaccttaaggaaagatcg aaattagagtttttcagcgctccgaaaaaaacgcatagcagaaatttttt catcttcacaggatcgattgtcaacaacaaaatacatctgtTGGTCTttg gtttgtttctgacgtttttccttcaaataatatcgatcactttccttttc cccttgagagCGCGAGAAAAAATTGATTACCTCGTgttctcgcgcgggcg aataaagatgaggcggtaatcttgcactgagggtgctacttagtttccgc cctattttgcacccacgatagaatggtacaaatacgggggtatgccaaat gataaactatgtcgttctgtacttgtgtttattttctgagagatacaaag aGTGTATTGAATATTGTTAACtcatttatttaagtattttagagcgcaaa tttaaatatatggttaaataaaaaacaaatgatagcagttctgttttttt cctcaaacccccgggaaaagtttttttgacgacttagctattttacaaat ctcggaaaagaactcccataggaattccgatgcataacctgattggttaa tttcggaacggcttcaagaaagtcataatggtaggtaattttaaaagttt ctgaggaaatgtgtgtaatttatcgaagTTGATGGCtcgttgattcttta aagaaaaaagataacaggtatagctttttctaatcctggaatatcgaggt tccagctacattGCTattctgacaaaacatgggacggcaattcggctaCT ATCtactatttcaccaaacctccaaagtcatttgatttgagttaatgaac ggggtattaaaaaatacatgatttcttTTTCGCAACGAGTaagcttttaa attgaaatatgaaaaaaatccatagtggaacacaaacgaagaagaccaaa ttagtggcaataCGATGGAgtgtttgacgtcacttgcgcggcaagttaca cactcgttatttgttaatcccatcgtgCAATAGGcagttactcttaggtt ccaaataaacggcccccgtttgggcgttctctaattctccaaacGGCAtt cggtcattttgaatgaaacaaaaaagttaaaaagtgcgcgctatcagtga aagttatcgtggcATGTCATGACAGAAAGTAtggttgataaacttggtgg agttatcataacaaatttgttgtcaaagagatttaacagtaagtgaaaat atacAGGCCATATACCAATCCtcctaagttagagcagttgacagtacaaT TTTATCATTTCTTTGCTATTGATTATTAAATTACTTATACTTGTACCGGG TGACCCCAAAAGTTCAGACATTTCTCGACGTCTTGATGCCGAACAAATGT ttcaaagtgcttggagtttagatatttagaaagtaaatatcctaacttaa aatttgagctatcactttttaaatttgaccgatttgttctctacttatga gcttttaaagtcaaaaaacacgtaaaaatctacaaaagcgccaattttta taaaaactagtcttgttttaagcaaaaattacttttaaaggtgtttttat taattattaatgtcataaaactcgttaaataggtcaatttgtaagtgatt ttctaattgattgcataaatttgatacctcttttttacgtgttttttaca ctttcctaaaagtgaattttgactttaaaagctcataagtagagaacaag ttggtcaaatttaaaaagtgatagctcaaattttaagttaggatatctac tttctaaatatcaaaactccaagcactttgggacatttgtttggcctcaa gatgtcgggaaacgtctgaactttttcgtgggtcacccggtataagactg gaaagagaatttaatttttgaaaggtcgtgagaaaatgaaattttacatC ATACATGACtgaattttattgataaaaGTGTAACACAAATTGGAATGTCC CAAAACAGCCAAATTCTGCCTCATGTTTTTAAACATGTTTCCGCCATCTT TCAACATCTGCATGGCACTGAAATGGAAAGTGTTTTACAAAAGAATCTGC GCAGGAAGTATGGGCCGAGAGTGTtttcatagtgtgcagaggggtccagc ccccagcatttttcaggggggggggttaaggaaaatagcccccggctaaa ttctagaaacatagcccccaccttcaaaaagcaaaatatcaaagaaattt tgcatgcaaattcttgataaatttatttttaaatcttccggcagggaaaa ttttttttcaagagggaTAACCCCCCCTAGCAAGCTGACCcccattattt tttgaaaaatacaaaccTTATTCTTGTTAAAATATTAacattggtttaaa aaaagtgtaaatttaaagtaaaaaattgcattttaagtGCATATTTCAAC TTCCTGAAAAAAGTAGGATGCTCTAGTCAACAAACGTGGTATGTTTTGAA AGCTTAACTATTACaatggaaaatgcaaaaaaagtcaGGCTAATAGCTGT CTCCGGTGGCTAGGGCTTTTGATTTTAATAACCcccggtaaaataaaaat aaaatttcagtgCCGTGAACAAGAAgtcaagaagtttgaaaaaagcgCAC CTTTGAGtgctcattttcaaattttgaaagaatgaaaagacatataattt tttttgcaaaagaaagctAAATAAATTCTCTTGAAGTTAGAAAAAACATT TGTtctaaaaacttttctttcctGGAGTTATGcaagtttgaagatttttt ttcaaaaatcctgtTTTTGTTACTGCCGCAGGCGCGAGTTTAGACCTccc taccttaaaggaagatcaGAGTTAGAGTTTTTCAGGGTTCCTAAAAAAAC GCATTGCCAAAATCTTTTCATCTttacaggatcgattctcaaccacaaaa tacatcttttggtcaatGGGTTTTTTTCTGATGTTCTTCCTTCGAAGAAG ATAtattactttcgttttcccttTGAACAcctgagaaaaaaatgattagc tcgagTTCTCATAATGGAATATCTAAAAAACTACTCAAGGTTTAAAGATT TAAGTGAACCCTAAATTTTTCTGATGATAAGGGTTTTTCATTCAACTTGG TTTGACATTTTgcaatgagtttgaaattttgactgacCCTCCTAATTCCg ttttgaagttcaatttttatgttttcatgaCAGCTTACTTTCAATGTAAA AGTTTTGAAGATTCCATGTTTAAAGCTATTATTAAGGAGCTAGCTAGCAT TAGTTTCGAACCCCATGCCTCTATTACATAATAGTTTAAGAACGGCTAAG AAATGCTCAAACTTCGAATTTCTAGTCTGATTTCTGTTTAAGATCAACCT TAAACCACTAAGAGAAATGTGATCTGTATTAATTGANCTAactcaaaaag acaaaataaccccagcgagatcgctcaatgtttcaattttaggctaaaaa ggctgattttctccgattctgggtagcaaaatgcatgaaagcggcatttt tgaggacccacaacttttaaactttttaaggtacacacttgaaattttca gcaatgaaacacttcagagaaagctccaggaaaaaNGCTCATTTTCATTT GATTAAATTATTTCATTTCATAAAAAGGGTCTCTTGCACATTTGCACATC TCTTATATTTAATTACTTTGGCTGACGTTTTCTGCTCTACCCTAACTTTT TTATGTAATATTTAGTTGGattgtattttttgaatgtcctctcatttttt tctccttagAATCCAGTACGATTACTTGCTGGCGgttttcaaagaaatta caGTGATTCTGGTGTAAGTATATCGCTCTATTCTNGGCGCTCAATGTCTT ACAattagggtagatcgtcaactaccatttttagcatgatgtcaaaaaat tcaaagtgtaatatttttttgtgaaaatttaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012268TCONS_00012268Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000143supercontigsc0000143:336190..341572 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
57.82 58.76 97.73 86.84 14.84 9.32 8.82 16.38 46.01 44.57 58.65 50.11 52.64 70.05 32.06 34.49 93.46 143.62 36.56 42.91 62.73 61.12 31.91 32.95 63.66 69.85 22.22 23.09 19.07 16.28