XLOC_006904 (gene) - C. hemisphaerica

Overview
NameXLOC_006904
Unique NameXLOC_006904
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000143:262641..267070+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006904 ID=XLOC_006904|Name=XLOC_006904|organism=Clytia hemisphaerica|type=gene|length=4430bp|location=Sequence derived from alignment at sc0000143:262641..267070+ (Clytia hemisphaerica)
GCCAAGATAAGATCCTGGGGAAGAAAAGAGAAAACACTTGAATGTACCAA
ATACCAAATTCGATTAAACATTTCAGGGTAACATATATCATAATAAAATC
TAACAAGCTTTTCTACTGGCGTATAAAACATTGTTCAGGAAATGGATACA
TAGGATATTTGGAAGATGTTGATTCCGTTGCTATTTATCATCATTTCATC
ACCTTCTACATCAGCCCTTAGTAGATCTTTATCATTGCCATTGATGATTG
ATCCGCTGCCAATTGCTTCAGCTCCATCGATAAATGTTGATCAAACTGAT
TATGGAGGTATTGTGATTTCTTTTAGGGCTGTAATGTACaagcaatacac
cttttcgaccatagcTGCCAATTGCCGCGcgggtatttttttgtccgctt
tatcccactaaaaccgtctcagtccttttttcgcacctataaacaataga
aaaatgtgtcaaaaaaggactgtatcgagtttagggggataattaaataa
ttaggTGGCACGCGCCTGTCCGCACGTTACTACGGTTTAAAAGTTGTATA
ATTTTCAGGTAATCTTCTCAAGCCTCAGCTGACAAGAATTAAGCAGCTTC
GGTTAGCAACCCTAGACctagaaataaaaagaatcaaaccagcttttttg
aaattatttagaatcaaaacaacaaaaaggaTTTCAATACCGAGATATCA
GGTATTTTAGGTTTAACAGGgataaaatccaaaattttgaaagttgataa
ggcgagaccaatttgattagttattttatgggcccgaccgacccaaaaat
tccaaaaatcgaaatcgaaacaaaattgattttggttgtacatttttatt
ttcattgctttacagactgccaaattttcaaaatgttggttGTTTTTGAA
AGGTTTTGATAATTTCGTGTTCAATTATTTTCATTCTATCCATGAACTCG
agttttttgtgtctttttttccatttccaattcaagatgtagtagctttt
gctgcctttttaagagatattatagctgaaattctacttttattctTTCG
CCGACTGACTGACCCatttttttgggtagcttggccaatttttttgagcg
aaaaaatgaaaagttgaaagaagttcaacttttttaccATTACATCAGAT
TTtcccaatggaattgcttcatttttcaaccgaccaatgactttacaaaa
acgttaaaaagttttAGCTTATTTCGCGTGAAAGTTGAGACTAGCTTTTA
GACCCAAGTTCTGAACCCACCGTGTAACTTCAACACCACCATGTCAACTC
ATGATATGTGAGGGGAATCAAATAACATTACATTATTGAATTTTCGCCGG
GATTAAATATTGCTGTTGAGCTCATCTGCGAAATTCTAAGACTTTACAGG
AACTCAACTTCGCAGATGACATTATCaggagacaatattttcatgatttt
gtgtttttttttactgcCAAATTATACATACTTGAAATgcgcattattag
cgcttctttgatgccggttaacattttaaaaatagctatttgacattttc
gagctttttttcaaaaataagaactttccaaatttccattgggttcgcgg
atgacaccccaATCAGCCtaatccgcgaaattcaatcccTCTGAAAATTT
ATCCCGTTAAAGTAATAGTATGGTAATGAGACAGTACTACTGTAATGCAT
CGCAATCAAAGGATCTGGCGTTGACACTTTTTCTGCTATACTGTTGGCGA
GAGAGACAGATTACACCTACAAACGCCTTCTCATAACATTGTGAAACGAC
GTAAAAGAAAACTTTCGTTTGAAAAAATGGTTTTCTAAACCatgttttga
cttttcgtaTTCTTTAAGTTCAAAtgtgtcattttagagatttaaAAATG
GGTCAAAGTTAGTTTGAATACTGAACAAATACAATTTAAAATTTCCTCCA
TACTATTATACCCTTACagctacttgtttcaaataaatgcCCTCTTAGAG
GGGAGGCGTTTTTTTCGAAGAGGagtttatttgagggggggaagcccttt
ttacgccggccctcattggcgttatttttgggctcgtggcgtaataaggg
tcAGTGTTAAAAGGGAcagtgtaaaaagggccaagattttgcaattttta
actAAAAGCGGGGTTAATTGTTgaccattttttctcaatttaaaggattt
taggcatgATTAAAGGATAAAAACTATCCATTCTTTTTACTCTATATCCA
AAActtgatgaaaaaatgattttcaatggaattttcaacagtttgatact
gaaagatgacattttaatgtaaattttagttaatacttactgttttgaag
cctgaatagcgaattttttacaagtttacaagttttggcgttatttacgg
ccctaattggcgtaagcccaaaattaggctgtgacAGAAtcagggccggc
gtaaaaggggccagCGTTAAATTAGGGCTGGNAGTGACAGAATCAGGGct
ttaaattagggccggcgtaaaaagggccgataaggtaatacggtatactt
tttttcaaaaagaaaggtGTTATAAAAAAAGACGGCACAAAATTGCCTAA
AAGTGATAACAATTTAACAATAATACTGAGCATGGAAGTGCTGAATTTAA
AGCAATTTAAGCGTCAAATATATAGTGGTATAATTATTTTAGTTCAATAC
CTAATATTTGCAATGACGGATGCacctttttttactttttacagtGGCTG
TCAATTATTTCCGAGATAGAGCAGATGATCAACTTTACTGTATCCGATTT
GAAACATCTGCAATAGTGCCCGTAGACAGACCAATCGATTGCTGCAACGA
AGAAGCATTCCTCTATTATCTAGACGAGGATGATACCTTCTTTTCGACAC
CTGATCGTACACATTGTTTAAAGAAAAGTGGATTGACTTACTCTCTAGGT
AAGTTcgtgtccgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcagcT
TTTTTCGGGATTAGGTTAAACTTGAAGGCTGTTTCCTCATCAGACACATG
TCTTATATCAGACCTGTGTCTCCTATTATATTGTATTCTTTTCCTCTTGC
TAACCAATCTttctccacatctgtgtcaatttaatgtgaaaaaagttggt
aaattaaaattgatgagtaagtaaAATGATATCAttctacacccctgtgt
cacagacccgctagggcttcagccccactggaaaattgactttgatttta
tccccattcgaaaataattgtttagaaattacactccaaaaccatcctca
ctggattttttaaccttggaacaatagaatttttatccccattgagattt
caatcgaaatttttatcccagctgtaggaaaaagttttcattcttattca
aaaacaaaatcttcaaGACTATTTTGAGGTATTGTGATAATTAGTAACAA
CCACTTCCTTTATAGCTGGAATAGGTGGAAATTGTAATGCTCATTTATTA
ACAAAGTGTATAAATACGACATCATTGCCGACAGTTGAATATTACAACCA
CGGAGCCGGTAGAACATGTACTACTCGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012258TCONS_00012258Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012258-proteinTCONS_00012258-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000143supercontigsc0000143:262641..267070 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	1.15	0.27	1.75	1.33	2.37	1.15	1.72	2.95	4.92	5.88	0.34	0.41	0	0.13	1.63	3.12	0.08	0	0	0	14.07	7.34	0	0	0	0