XLOC_006772 (gene) - C. hemisphaerica

Overview
NameXLOC_006772
Unique NameXLOC_006772
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000136:259980..266415-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006772 ID=XLOC_006772|Name=XLOC_006772|organism=Clytia hemisphaerica|type=gene|length=6436bp|location=Sequence derived from alignment at sc0000136:259980..266415- (Clytia hemisphaerica)
GGAAAACAATGGACTCGGTTTGGGAGTAATATAATTAATCTGTAGTCAAA ATTAATATGTGAAAATTCGAAATTTCTATTTCTAAAATCCATTATTTTAA AATTTCAAAACTTCCATAATTCCACAGATATTTCTTTTAAAAATACATCA ACCAAATAATATTTCAAAATCCTTCTCTTTCAATCCGTATAACATTTCAG TATCTACCCCGGCTGGCATACAACGTTGTTTTAACGTTCAAATAACGTTA TTTGGACGTTGTGAATGTCAAATGGACGTTGTTTTGACGTTTTGGCCACA GATACTGAAATGCTATAAATTTGTTTCCTAGTAAAAAAGAGAAAGCTCAA CTATCGTTTTCAGACATTTTCCAGACAAGATTTTTTCTTTTGAAAAACAT CACAGCAAGACTGAGGATATTGTAGTGAAATATTTCAGAAATTCTTGAAA TTTGGGTGAGAAAGTCTGAAAACGAAATTTAGGCTTTCCCTTAAGTTGAC TAAGTTACAAAACAAACAACCTGCTAAAACATATTGATGATAAAGTTTTT TTTTACAGTTTATAATGTTTTTAAAATATAATTGTTAACTTTACTTGGTA TCCTGAACACATAGCCTGTTGACAAGTGTTTTCAGGACGACCTTATTAAT TTAAGCTTACCGAAGCAAGATCAAAGTATAATTTAAATCAGAAAATCCTC AAAAACTCAATCTTAGTGATAGTATTACTTGAAAAATTTATCAGACCGTC AATTCAAAACCCTAATCAAGTCTCTTTAATAAAGCAAACACCCAAAAGAC AAATTGTTTTAAACAATGGGAGCTTACCCTGAAAAATACTCAAGGTCTGT AAGTAAGACTTTGCTTGAAGGTCATTTTTCAGTTTTACCAGTAATTACAT AAAACATATTACATAAAAAATGTCTTTTACCGTAAGTAACAAAATAAAAA TTGTTATTTTATAAGCTCTGAACTCTGACTGTTAAATGGATTTAGTCCAT TTTAATTAGCTTCAAAATTTCTGTAATCTCATTTTTTTTTGTAAAAAAAA GCTTATTGAAATGTGTTGAGAATGTCCAAAATGTTTTAAAATAGGCTTAG TACATTCTGTGCTAGGTCATATCATGTCAAAGCGAAAAGAGATGCTTCGA AATGGTATCAATTTCACATAAATAGCCATAAAAAATCATGCAATATTTTT TACGAGCAGGCTAATTTCACTTTTTCGTATATTAAGTGTACAAAAAGGAA ATCAATCTGTTACACAAAATAAAGAGAGTTATGTTACATAAGGCCATCAA AATAGTCACTTGTCAAACACGTGACCTTATTCTTAACAAAACGACTACTG TAGTAGCTATTATAAGAACAAGTTTGTATATATGGGAGAGAATTATTGAC AATAAAATGCAGGAAAACTATGTAACAAAGGGTAAACTCAACCAAAAAAA TAAAACATAAAATCACTTATTTATACTAGCGTGGATATATATTGATAAAT TTTACAACTACTTTACAACTAGTTTCAGGATATAAGGAAAAGGAGGTGGA GCAGAAACAAAGACAAGCCTCCTTTCCCAACAGGGAATCAAGGCTAAAAA GTAAAATGAATCACCATAGCTACGCTTTTAAAATAAACAAACAAGAAAAG AAAAAGTAGAATAATGAGTGAAAAATTGAAAAGAAATTTAAAGGGATTTC GCAATTGACAATAATAGATTTAAAGAGACGCTATTTTTAATGGAAATCGA AAGTACTAACTAAAGCGAGAGAAAACATATAAAAAAAACGTTTCAAAAAA AACCCTTGGGGAGATTTTGTTGCGACAATTGTTGATGGGACCAGCCTCAA GCAATTATCATTTCAAAATCTCCCACATTTTTATTTGTACATTTCGTTCT TTGAAAAACTCAACCATAGAAAAAAAACTGAATTCTGTAGAAAAGATTTT TTTTACTTCCTCTACTGTATGAATAAATAAACATGAATTTTGGTTTGAGT TTGGATTGATTAAGCCAAAGAAAGAAATGACGGGCCTTTTTAACTTTTCT TTTGATGCTTCTCGCCTATGTAGTCACTTCAAAGGTCAATATCGGTCTTG TTTTGATTGTTGAATGACGAAAGCAAATGGCGGAAATCAATGAAGCTTTT TTTCTCGCCGTACTGAAAAACTACTGAGCCACTAGCCTTTATGATGATGA CGCTGTAATAATGTTTACGTCAAGGCTAGGGTCAGAAAAAAGTCTAGTTT TAGAAACATAGAGCTTTAAAAAGAATAAAAGTTTTATAATTATATATTAT AATATTTAGTAAGTAAATAAAAAGCTTTTCTTCTTTTAAAATAATATCTT TTTAATAATAAAAAATCCCTTTCTGTTTAGTCAGGTAGTGAGAATGCGTC GAGTCTACAATTTCATACAGTAAACCGTTTTTTTTTGATGAATTTCAAGG AATTTCTTACTAATACACTAAAAATTCTATTTTCAAAGGTAAACAAGACA TTTCTAATATAATATGAGTAGGCGAGCTATCAGGGGTATTTTATTTAAAA AAAGTATGACTAAGCTTCATTTTTTATATCGAAAGTAAGTATAAAAATGT CCTTTTATTTTGTACAACTCTAGCAATACTCAGCATGTGAACAGATAAGC AAAATAAAACGCCTCCATTACTCCTGTATCATACGATGTCAATTATTTAG ACCGTGGATTATTTTCTCTCTGTTGTTGTTTTTGACGTGACATAGTGTTG TTTACAACTTTATAATTTACAATCAGGCTAAATGACTTTCGATTTTTAAA GTACAGTAGTAGCATTATTTGTAAAAAAACTGAGTAGAAGAGAAAAACAA CAGTAGCACTCAGGAAAATTGGATTAGCCGTTTTAATCAAAGCTCATTTT CATTTAGAAATTATAAAATCGGTTCAATTATGTAATCTTTTTTGTTCACA TCCGAAAAAGCTACATGAGTCGCCAGTAGACATAAGGTTATTTAAAACCC TTTTTCCTAAAGTTATTATACAAAATAACCCCACAGCTCAGCTGGAGGCA TTTTCAATGCTTTTTAACCCTGCGGCCTTCTCATTTTCTGATAGGTGCAA TTATAAAAAGAGAGAAAAAATCTCATTTGCTTTTTTTCTGTATCACATGA TCTTTATGTGAGATTTGTTTACCTTTGAACTCAATCAAGCATATCGTAAG AAAATCACTTTAAATTTGATCTTGTTACAAAATAAATCATACACACTTTG AGTACATGCAGAAAGATTTTTCCTTTTTGCTGTATATGTCATATTGCAAA AATAGTGTTCTTTTTTGAATTATGAGAATTTTCTTTCTTTCCCACTATAC ACTATCCAGATCAATTTTTCATGAGAAAGAAAAATTACACCATTAAATCT AAATTCAACTGCCTACTTTTTTGACAAGAAGTTTTTGAGAGACTAAAGCA AAAGAATAAACATAACTTGAACATTTTGTTAAAAGTTGAGATGAAAAGTA CCCGACTGAATCAAAGGTAGCTACTACAGTAAGGCGTTTTGATTCTTGAT TAGGCAGGCAAACATCCTAAAAGTATGAGAAATTAATATATGCAAAAAAC TATACAAACTTTCTTTAAAAATTTAAATACTTTACTTTCCCAACTTTAAA GGAGGTGAAAGAATAAAACAGGGCAAAATAAGTGCCCGAAAAAATCTTTT TTTAAAATAACCAACCTCCCTTTCAAATAACGAAAGGGAAAATATATTAC ATACGAAACTTGAAGGAGATATAACTTAATAATATCTATTAAAAAACATG AGAAAAACGTTGCAGAAAATTCAACCAAAAAATCACATGCTTTGACTTTG AGAGAATTTAATACTCTCTTTTTAAACTATTTCTGAAAAAGAAATCTGTC AAAGCAGATCTACACACAAGAAAACGAGTGATCATCTAACACTTAAAACT TTGTAATGAATAAACAATGGACTCCAGTTTCACCAACTTTTCTAACCAAA AAAACCACATACATATCAGGTCATACAAAGGACAAGACTCCAGTCTCGTT CTTCTGATCAACAGAATTTCATATTCCAAACGAGATTACAAGACTTCATT TCCTTATTTCAACCACAAAATGACGCCAAATTTTAGGATAGAATGTACAC CACAACTTCTTATGACTTCCCTCTGCTCAAGCAGAAGTTAATCTTGCGAT AGTGTGAGGAGGATAAATTCTTGTTTTCAAGCCAGTGGGAAAACCGAATG GTTCAAATTTTGGGGCGATGATACTTGTATGCACAAATGCAGGCTGTTTG AAAAACTCCAAGCTTTCTCTCTTTTCAGCCAAATGAATCGTTGTTGTAGG GATAGCTATATTATCCACTTTGGGAACAACAGCCCTGACAGATTTAGTGA CAGGATCATAATCAGGGTGCCGGCGAGCATGTTTCGCCAAATGATCACTT CTCATGAAACGCTTAGAACAAACAGGACATACATAATTCTTTTCACCAGT ATGTACTCTGTAATGTCTGGCAAGTTCATCAGACCTGGCAAACCTTTTAC CGCATGCAACATCACTATCAGATTTCCACGTACATTGGAATGGTCTTTCA CCTGTGTGAACTCTCATGTGAGCCTTCAAGTGAGAACTCTTCCCATAAAT CTTTGAACATTGTTCATAGGGACAAGCATGAGTTTTCCTTTTCCCATTTG GACTATCAGGATCAGCAGATTTTCTCTTTCTTCCCATTGCTTTTGGTGGT ACTGTGTTGAAATCAGTAGGGGCATCCAGATCATTATTGACAGGCGAGGA AGTATTACTTCTAGGTGGTGTTAGAAAACAACTTTCATTTGGCAAATCCG TTTCTTTTCTCGTGATGTCTCTGGAAGAATCATGTCTCTGTTTCAAACTA GCAAGAATCAATGCAACTCTTTCAAGGGTTTCTTCATTTTTATTTTCATC TTCACACTCTTGCCTTCTGTTACAGGACATAGAAAGTAAACAATTTGCAG CAGTACTTATCTCACCCATTTCTCTTCCTTGTTGAAGTTTAGCCATCACA TTATCCAAAAACAATATTATCTATATGTATATAAAATTATAAATTTATCT TCTTAGTTCCTTTCTGTTTGAAGTTTTCTATGTACTGAAATTGTTATAAA ACTCAAACTCGTGTCATCTCCATTGCCAACAGCTGTTTTTAGCAAATGTT TTGTTATGAGGAGAACAAAAACTATGAGCCGGTTTTTTCCAACTCGAAAG CATTTGATTGGCTTAAAGAACAATAAAACTTTCATGGAAGCGTTTTGATT GGTTTAAAAAATTACATTGCGTCATCGTCACGAGATTCAAGATGGCCGTT TGTTATGATATTGAACGAGCGGGAAAATTATCAAAGCATGGAAAAGCACA TGGTTTCAGCTCAGCGTACTCTGATTGCTGAATCAAGACACCTATAAAAT GTCGTAGTCAAAACATGTTTTTCTTCATTAGCAGGGTGTTCAAAAAGTCG AGGATTCTTAATCGAAACCTATCGCCTTCGCTCATACAATATTTCTATTT TCGAGTTAATTTTCATCAAATCAATGGTAGTTCATAGCAAGCACTTCTTT AAAAGAGCGCACCGATAATTATACGACTGCAAACAGTATGAAAAACAACG AGTCGAGTAATCATTTTATCGCTGATTCAAAACTTTTATTCCACTTGAAA AACAGCCTAAATATCATTATTAATACAAGATTTTAAAAACATTACATATA TTATGCTATTATGTATCAAACCTTCGAAGGTACCTTTGGCAGAAGGTACA ACTACCATGGAGTGTAATTGAATATTCAAGAAATTTGACATTCTAAGAAA TCAGTAGTATCAGCAATCAAATTCACTAACGATTAAGTAGAGTTGCTAGA AGATTTGATGCAGCTCAAGACACTTCAATCACNAACCTTTTACCGCATGC AACATCACTATCAGATTTCCACGTACATTGGAATGGTCTTTCACCTGTGT GAACTCTCATGTGAGCCTTCAAGTGAGAACTCTTCCCATAAATTTTTGAG CATTGTTCATAGGGACAAGCATGAGTTTTCCTTTTCCCATTTGGACTATC AGGATCAGCAGATTTTCTCTTTCTTCCCATTGCTTTTGGTGGTACTGTGT TGAAATCAGTAGGGGCATCCAGATCATTATTGACAGGGGAGGAAGTATTA CTTCTAGGTGGTGTTAGAAAACAACTTTCATTTGGCAAATCCGTTTCTTT TCTCATGATGTCTCTGGAAGAATCATGTCTCTGTTTCAAACTAGCAAGAA TCAATGCAACTCTTTCAAGGGTTTCTTCATTTTTATTTTCATCTTCAGAC TCTTGCCTTCTGTTACTGGACATAGAAAGTAAACAATTTGCAGCAGTACT TATCTCACCCATTTCTCTTCCTTGTCGAAGTTTAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012047TCONS_00012047Clytia hemisphaericatranscript
TCONS_00012046TCONS_00012046Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000136supercontigsc0000136:259980..266415 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.86 0.75 0.59 0.59 10.99 8.23 13.28 15.28 11.01 10.13 12.32 16.8 11.21 7.84 5.68 7.72 7.65 6.97 10.05 17.9 17.58 21.28 6.83 10.94 30.9 24.58 25.55 22.48 5.12 4.67