XLOC_006758 (gene) - C. hemisphaerica

Overview
NameXLOC_006758
Unique NameXLOC_006758
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000136:175339..179361+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006758 ID=XLOC_006758|Name=XLOC_006758|organism=Clytia hemisphaerica|type=gene|length=4023bp|location=Sequence derived from alignment at sc0000136:175339..179361+ (Clytia hemisphaerica)
TTCGGATGCTGATTGTTCTACGTTTACGGACCTATCGGAGCCACCTTGAT
GTCTTCTGCCTGCTCACTCCCAGTAGAGTAGGTACTTGGTAAgctttttc
gtattttttaaatctaaaatgCTACTGTTGCAAAGGGTCTTTACGGGGTG
TAATATTTCATTTGATTAtttcaggccatttttcatgcccttttagcgtc
aggtcatcggacgctgcccctccttAAATCACTAACATTCTGgcaaaaac
agcctttttagctgaaaaacacaagaaaaagtgccctttttggccaccaa
cggacgctgTCCTGCCTTTTTTAAATATAGCCTGTATTTTTTCCCTTACT
ACCATAAGCACAACTTTGGTAggcagttgggtgtttaagataaagaCGGC
AATTATTGGATGCCGAAAATGGCAATTTTTacgtcaattttttcaacgat
gaaatgctgaatcagcaaaatgtgttgtccttttaagggcaaagataTCA
GAcgtgtttgaaaatagtaaaattacATCGAGAAGAAGGCTTTTCGGAtt
ttttaaagtgattttttcaatttttcattgttccatagcatgaaaagttc
taaaataatatgttaaaagatcctgcatcgatgccgaaacacagccagaa
agagataacaaacccccattgtaaatttgtttacatatgactcgattttg
ctatctgcatttccaacgaAAACgtacaaaaaccagttgaaaacaaaact
aggaccctgccgacgcaccggacttaacaaacaccggacacgcgaaagtc
cggtgtaaaatgagaatgttttttaccaccggacaatccctacaccggac
ttaaggaagtcggatgtccggtgttggagaaggatatttttttccaccgg
acatgaccagtccgttgcgtccggtgtttctttattttttgtttcgtaAA
TGTCTGGCGttcaaaattccctgtatgcaacaccggacttattgcgtccg
gtgtagcgaaaggatactttttgccaccggacaaatacaccagacagtcc
ggtgcgtcggcagggtcctacaaaactaaacgaggcacagtgggcctact
tatctCGAGGGTGTCAAATATAGCATGTCCAATAataaaattaactttta
tttctaaaaacgcaattttcatttatttacttttttatttttctgctgat
tcagcatttcatcgttgaaaaaagTGCCGATTttggcaataattgccgaa
aagagcaataattgcagtttatatcttaaacacccaactggtGGGGCAAT
TtcaatgacaaaaaaacaacattcctttttttttaataacgtTTATGGCT
TTttcgtaaaagcgaaagacacaaatataatttttgggTCCAGTATGCAG
AAATAGTGTCAAGGCCTGCAGGCAACCTAGTAGGGTTGGATATGGGTGTA
GTTTAAGTGTGGTTATGATATGTATCAGATTGGCCCAGACAtaattaatc
gaacagttcgattacagaactaattgaactttgtcgaacttaatcgaacg
acaaaagttcgattaaattctttaatccaacttttcaaaagtcgctaaaa
ttgtgagtattcgattaagttcgacaaaatatattaagttcgacaaagtt
tgaCAACGAGAAATGtcgacaaattcaacaaaaaactccgttcgataaag
ttcgacaacaagaaaggtttgacaaattcgacaaaaaactctgTTCGAAA
AAAGTTCGAcaacaaaaaatgacctcctttgggtactacCGTGGACAAct
cctgggggtcccggcagaaGTCCCGGGGGTTGGattggtgcccactggtc
aggaGGGTGTAAGGGTACACATCTGTACCGTttggggtccttcaaagttc
ctcaaagtgttgtcaaaagccaggaaaaattgcaaaaaatgacCAGCTCT
GGTGGGACCAATCGAGGCCTCTACAGCCccccacagcctaccacagccct
tcggaCCCCTTCGGATACCCTTTGCCTTGCTTTCCCTCAAAGCCAgtacc
ctccatcagtcatccggagcctttaaaaggcttgaaaaggcggaaaggct
tgaaaattggtcaaaattggaaaaaaattacctcctttgggtaccaccgt
ggacggcccctggAGGTCCCGGCCGGGGTTTCGGGGAGTTCGatcggtgc
ccactggtcaggggggatgtgagggtacacgcctgcaccgttcAGGGGgg
tgtgagggtacacgcctgcaccgttgggggtccttcaaagttcctaaAAG
tgccgtcaaaagccggcaaaaattgccaaaaatgacctCCATTGTAGGCT
GCTGCTACACTGAGACCAACtgaggcctctacagccctcAACAGCCCCCC
CCCATAGCCCTTCGGGGTCCCTAAATGTCCACTGTTCAAATTGTGCTTCG
CTGAAATCTTCACTCTGCCTTAGTGAAAAGTAGAAATCGCCAATTCAACC
AACCCAAGAAActaactgttttaaattcaaGGAATGAACTGATTTTGAAA
TGTTGGCATGTGAATAGGTTCACCCTCAAACTCCACGACACCAAAGactg
aaatgacgtcaattATGACGAAGACTTAACAGTGcacagtatatttttgt
aaacttgaaacaaatttttagtatagaatttttgactgaagatcgTAGCG
AAAGCTGGCTCTTATGTAAAAAGAGTATGTACTGTATTTTAAGTTTAACT
TTATAATATAAATTTACACAGTCCCATTCACTTTTAGAAAGTAAAGTTCA
ACAAACAGAATGACAACACTTTTTCGGAATTTCTGGAGGATAGTTCAATC
ACCATTATATCAAAGACAAAACAATCTTCTTTTACCAAAGAACTGTCTCT
TTACCACGCCATCTTCCCTTGGAGTCAGATTACCACCAAAGTAAGGATAa
agtttttatttgtactcctatgGGGAACTTGgtttaaaaacaattaaatt
atGGTCATTTTGATGGGTCATAAGTTCTTGCTTCTTCTTGCTGAATTTTA
TCCtgctttttgataaatatttataaaagattttacTATTTCATTCTCTT
GTAGTGTAAGTAAGTCtgttgaagatcgaattagagagagaaagGTATCT
ATTATTTCATTCTGTTGTTTCAGAGATGCtgacaaaaagaagaagaagaa
tccgTTGGTTGTTGCCGAATTAAAGAATGATACAAATACAGAATTTCATG
AACTACCCATAGTCCTCATCAAGGCTACTTTTAACAATACCTTAGTCTAC
TTGACTGACCATAAAGGTAAGTAAAAAATGTGCTTCACcttaattttgtt
atttttaagtttttgtaaGGGAAGCTAAAGCTACCAAAGAATTGTAAATT
ttgtcagaaaaaaattaaattcctgccaaatttaattcATTCATTTTAGA
AGAAAGTCTTACCATTAACAGGTGGACTgcattttgaaaattagtttttt
ttgtgtaAGATTCGACCTATCTTCTAATTCGTCTTTTGACACTTTAGTTT
CACCTTTCCTCTacttttatcctaaatattcggTCGCTagttattcatga
tatttattCTCATATGGTTTATCTTAGGAACTATGGCAACGTGGACATCA
GCTGTAAGTAGCCATCTCCTGAATCAAATACTTAAATGAAATGACTGTGA
TATTTGATGTTAGTTCTGCCCGGTTTCCGTATGCTTTAAAGGATTGCTAG
ATGTTTTATCCATTCCATTTGGTGACCCTTATCTATGTGAGAGAAATTAA
TGGAAGTTATATTTTCTTGTATTCAGGGTATAGAAGGATTTAAGAACGCC
AAACGTGGAACCAATTATGCTGGTAAAGTTGCTGGTGAAAGCATGGCCAA
GGTAAAACTTGCTTTCTCAATTCAAACTTTATTGTTTCAGCATGACTCAA
AAAAAATGTCCGATCAAGCTGTTTTTTtggaatgaaaattttgatttttg
ggactGATAAGTAGCAATTATTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012025TCONS_00012025Clytia hemisphaericatranscript
TCONS_00012026TCONS_00012026Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012025-proteinTCONS_00012025-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000136supercontigsc0000136:175339..179361 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
42.3	38.35	22.22	16.05	48.13	31.16	38.59	42.32	39.89	36.92	27.33	29.15	19.34	22.33	25.39	19.57	50.19	52.17	9.15	9.92	30.14	26.58	41.64	38.19	28.4	30.98	14.82	9.39	22.14	18.87