XLOC_006472 (gene) - C. hemisphaerica

Overview
NameXLOC_006472
Unique NameXLOC_006472
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000130:432744..436948+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006472 ID=XLOC_006472|Name=XLOC_006472|organism=Clytia hemisphaerica|type=gene|length=4205bp|location=Sequence derived from alignment at sc0000130:432744..436948+ (Clytia hemisphaerica)
GCTGCTGTTTTATTCCAACGTACATCTGGTCAACCTGTACAAACGTGCAT
CAAAACATGCAATGATTACATGGTCACCATCAACCCTTTGCTCACTGTCA
GGTACATTGATTTTAAAGTGGCTTTTACACAAACGCAAGATTGAAAGTAA
GACCCATCGCCAGATTTCAAAAGATAAGAAAGTAAAGTAAAGAATATGTG
ACCCAGAAAAAAGTATAACGGTTTGAAGGGTACAGCTATGTCCGAAATGa
tttgaatttttactaaattattttttccattgtatagaggaaaggcaaac
ttaaaatttggttcaGTGGTTGTCAaattataagcttttgaagtcaaaat
tcacttttgaaaaatgtcaaaaatcatCTTGAAAATggggtatcaaattt
taatcaattaaacacaaataaaaagttaatttaTTAATTTCTTTTATTAA
ATCAACAAGATTTGGGAATGTGAACAACAAGGAtagaatatttttctttc
ttcttttggtTTGAATGTTTGAACCATACAGCACCATAACAAAGCATTCT
CAATGTTCAAGCTTAGATTAACGACATTAATAAATCTTTTTAACGACTTT
TAAGTCATTATTCTAAGCTTGAAAGCTTGAACATTGATATGGTGTTGTAT
GGTTCATTCAatttgataccctgtttttgatgatttttgacatttttcaa
aagtgaattttgacttcaaaagcttTTAACTTGAGAACCACTGAATAAGA
TTTAAAGACAATACGTTGTTTACGCCGTCTCTCATTACTTTGTGATTAGA
CCACTTCTCACGGAACCACCTATACCAATCGAAAGCTAAAAAAACGATCG
ATaagacttttaagtggatataGTTGGGAAATTCGAGTAAATCGACTGGG
AATGACGTCAAAACGTAATTTTGACGTTAATTTTCTCGAGATAGGTTGAG
AAATCGACAATATCAACTTGAAAGTCCTCTATATCGTTTTTTTAGAGCTT
TCGATCGGTATAAGTCGTTTTCGGTTgaaatttcgtcaaatttttggggt
taaGGGATTTTGCCTGTGACGTCAGTTTCAGAGTCCTAAAAAGTTTTTCT
AGGCCTTAGAAAAGAACCCCTCGTGAAAAACTCTTAAAATACTTCATTCT
TTGAAATGGACCAGGTTTGGTTGCGTAGTATAAAATATGTTACGGGTCCT
AAAGGTTTGCTTCCTACTAAAAgtattataaattttttatggtcagAAGG
ATTAGTTAATTTTTGAAACCGTCGACCTCTGGTTTATACTCTAgaggctg
agttaggtcccgtatgcgcatcggcgtatagtcattttttcttttgatca
tgaaagtatagtccttgaagagtcagaaaacgtgtgtNgttttgatatag
gggatgagtatcgtgtataaaattcccgcccgagagttacccccgtcttt
gtgttttttggGGTTAAGGGCCTTGATTAGTTTTTGTACGAGAAATCTTC
AAATTTCATGAAATgttcaataaaattttgaatggctAGAGGTTAATATA
TCGTTAGANtcaaccctttttagccctcttgcttgaaaaacttagaaaac
gtaagtacttcgtatctcttgataacgaaattttctgaccatggttctga
cctttttcttaatcagcataaaatttctgatcgattggtatataatatgc
agggttttaagctcaaaaaatatttttcttagcctagcagagcctaagaa
tattttgaatccgccattatggatttcgaaattcatgtagaaaaaaaact
tttcctgaattttattatttgaacggtaggcaagaccctccgaaaatttc
aagtaaatcaagtaagccaatcaaatgttacagccacgcaattctggaac
caaaagtagtcatttcaaaaaatcaaaatcgaaagtgcttcatatctcca
gataacgaaattttcagaccatgattctgacctttttcttaatcagcata
aaatttttgatcgattggtatataatatgtctatgtttaaagtcaaaaaa
gagggctaaaaagggttgaaaatctaaaatccgccattatggaaatttga
gcctgatccaaataacgccacacacgttttctgactcttcaaggactata
ctttcatgatcaaaagaaaaaatgactatacgccgatgcgcatacgggac
ttaagtcagcccctagagtattaGATGGTTGTTTCAAATGCAGGTTTGAA
AAGGTTTTCCAGATAGGAATGTTGTCTGTCTGAATCCTTGGAAAACGCCA
TATGCATTACTCAGTGCTTGGGCGCCAAATTCTTTTTTCCAGATTATTGT
GTTACGTTACCAGAAAATCATTTTTGGACACTTCTAACGGTAGCGAGTTT
TTTGCTAGTACCTGTAGCTAGTACACTATTTAGAGTTGAAAATATTACTT
GAAAATATACCTAATATCCCGCATCATTTCAGATTTCCCATTGTTTTAAA
TTGACGTTTAGAGAGGCTCTTTTACTCAATCTAGAGGGTATAAAATCCAA
AAGATCCGGGCCGTCGAGCCCAACAATGGTGGGCCCTCCTTATATATTAA
ACTTATGGCCCCCCTAAAGCGAATTTTGTATGTATAGCACTTTCACTGTC
ATAGTTTAACAGAAGATGTTTTTCATCTTTCCAGTCAATTGAAGGTCGCT
GTTGAAACAGGAATTACAACGATCCCCATCCCTCTTGATGCCAACAATGT
GTTTAGTTTGGATGGTCATTTAAATGAAGCAACCTCCAATGTTGTTCATA
TTTACGATGTGAGACCAGTCGTTGGTGAAGTCAAACTTTCCAGCCTTTTT
GTGGCTTACCAAGCCAAGCTTGCACTATCTCCAATTGAATTCTCGAACCA
AACAATTTCACCAGTGAATGGAACCTACGCTGTAAGTCATATCTAATTCT
ATTCCATAAAGAATTCGCACATTTTGATACTTTTCccttgaaagaaagaa
aaacaaaatggaagTAACAcatgattttaaggctttaaNcttgaaagaaa
gaaaaacaaaatgaaagtaACACTCACATCTCTGACATttcttttgacgt
tttttgactCTTAAACACGACTAGGACCTAAGCTAGTCGCCTTGCAAAGC
AAAGCATTGTTTGTAAAAGCTTGAAATTAAGAAATCAAAACACAagttga
atgtttgaaaaaaacctCCCTGTAGCAGTCTCAATCCTTTGCGCCAGGGT
TATTAGTCAGACCCTGGAAAACGGCGAAGACCTTGAAATTATATTCGTCA
TAAATATTTTAGGGAAGATCTGGGAAACTCGGTgatttgttttctttcaa
atcgtTAAAATGTCTCTCCTTTCTTCAACAAAATTTCTGTAAGTATTCAA
TGAAAATGATCCTTATTCTGCTGAAAGACTTCTCAGGGTACAgcaaacat
ctccgccactgcttactccacccgaatttatcacgccactcctaaactat
tccctttttagtgatcttgtgtagacgataggatcgtctaggtACAGACA
AACTAGTACGGCAAAATTGGCATAAAGGCATCGTTTTTCAAACCTTCTTT
GTTCTCATAGTTTAAATGGAGTTTGACAGAGGGATACGAGTTCGACATGA
ATTTCAAGATCTCTGATAACCTGACAGTGGAGCATTCTTTTCCTGCACCT
GGAGACTTCTTAGTGGCGGTTATACAAGTACCTCAGGCCGATGTTGATTT
GGGTAAGTTCAGAGAATATTTTCCTTTACCACTATTTGTATTTAATCGCG
GATATCTCTGATAAGCATCCCTTTCTTAGGGATGCTTATCAGAGATATCC
GCCTTACCGCCTTCTTCAACTTACAACATCTTTTATACTGCATTAAcaga
tttcataatttttcatgtttttcactGACATTGAAcagatttcataattt
ttcatgtttttcaccGACATTGAACatgtttcataatttttcaggttttt
cacCGACATTGAAtcaatttaataatttttcaggttttttacCGATATTG
AATcgatttaatatttttttaggtttttcgcCGAGCGATATTGAatcaat
ttctcaaatttttaggTTTTCCACCGACATTGACGTTGACAGGGAAGGGC
CGATACAAAGAGGAAGCCGTCTTCAACGTGATCGAAGATGTTCCAACCAC
GCCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011550TCONS_00011550Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011550-proteinTCONS_00011550-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130supercontigsc0000130:432744..436948 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19	0	0.22	0.21	0	0	0.12	0	0.08	0.1	0	0.19	0	0.07	0.11	0.23	0	0.22	0	0.21	1.29	0.81	0.77	1.89	3.59	4.22	0	0.14	0	0