XLOC_006207 (gene) - C. hemisphaerica

Overview
NameXLOC_006207
Unique NameXLOC_006207
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000121:27147..34429+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006207 ID=XLOC_006207|Name=XLOC_006207|organism=Clytia hemisphaerica|type=gene|length=7283bp|location=Sequence derived from alignment at sc0000121:27147..34429+ (Clytia hemisphaerica)
TtacatttggtggttcgaaccgAGGTGTGGGAGTATAGTTTCAGAATTAG CAAAATAGCTTCAAATagtcaaattcagaaaaacTAAGTCCAGAAGTCAG AAAAAACAGAGTTAGAGATAGGAAATAgagagaaagaggaaaagggcgga attggtgattgaaacTAGATCTTTCCAACTGCACGGGACAAAATGGCGAC GAGATCTCTGTTCAGACTCACTTGCCATGGGTCAAATAAATACCTTATAA TTCGTGGTAAGTACATCTCCATTCCCTCATAATCTTTGAATACAAATCTT GATTTTTATATGGTTCTGTCTACATAGTTTTATATTTGATCGTGACCTGT AATCTTTTTGAAGTCTCCCTTTAATTTTGtttgtgctatttttttctttt ttatgttttttatgaAGTTATGTAACTTTTTAAATCCAGGTATTTCGTTT TAGAGGCTCTCTTCTATCAGAAACATAaatattctagaaaatgcaACACT CCCACAGTTATCTATTCATCTAGGAATAAAGGTGCTCTCAATCTTTTTAC TGTAGTTTGATGCGGTGTGAACTGGGgcgaaaaaaccttttttgctaGGG CAGggctttttgtaaaaaatagccTGGTTCCTGTCACCCACAGACCCTAT TTTCTTTCGTAAAAATAGGAGTTGGAGGGTCAGGTAGTCAATCTGGGtag gcaaacgatatcatccaccggCAGgacacaagtgttacgcgtaagccaaa tcacGTATTacaaacaacctctaaattgctgagtacaggagaaaaaaaat ctaaattcaaaatggcggccaagcccacgctgataactatcaaaaatctt cgtttttcaatcagctattgcagctcaataaatcaatgaaataatttgaa ataaaaagtaaacaaaccttgaacgtttcatgaatatccaaataattaaa aaaagtattcatctaaagtgaagattacatttcaaaataaaacaatttcc aaaccaacctaaagtcagtgtctgccaactaaaactttctctgcggggtc actggcaaggagttacaacttcagactttagattccaattcttgtatagg ctacaactacactgccaaatgatctgtattacaaatacttccaaatgggt ccataagttaagagaatgaaattatcatctagcacgggggttttgttttt aaaaacaaacttcaaaataaaattgttaatgaacttattacttaaaatat cacttacttacataatttatttatgatataacacccctttcttaaataat ggcctcttaaagtcttttatgtttgccgcaaaaagggagaaaaattaaat ttgacccccggttttttctctttttctagctagttcccgcgtgttagtgt agacacaactttaatccgcggaaatgaagcgttttcattggtctaaaatc acggatgtgaccattttaattttttcaatatttcgacCAGTGATGCTTTC GAATATAAGTAATGTGataatttcttgtttttgacCAAAGTCCATCACCt ggggacaaatatttttttataactaTGTTCAAACGGTTTTTTAGAAcgtg ttaaaaatcacttgctctgGAAGCACCGGAAGAGCTCCGGAACTTTCCag agagaaaaatagtgtttttttgcTGCTCCGGAAAACTCTGGAAGTTTCgg gagcgccgggagggtccttcattcacaaatacttatagcatgtaatttac agacctttttTAAGAAAGCTCCAAACCCTATCAATGCCCCTACcaggatc cctacgggatcctaagttagGTCTCAGGGTAcggatgcccctaagaaggc cttcagccttatattgtgactcttgagctccaaccctaaccctaaactga taataaccaaacccccgtctaggtccgaaaattaaaaattttcacttgca tcctgctGGATGATATCGTCAATCTGGTATTAGGTGCCGTCAATCTGATG CTGCTGAGCAATAGTCAGTAGCCTGGGAATCCGAgctcataaaaagaaaa aacacaaattacagtacctcacctcacaaagttttaaaattatatagagc ttggtgcaggtagattagtctcacacagcatagtgtcctccccccccttt ataaagggggggggattctgattttggccctttttttaaagtatggggga aaatgaaaaatttgaaatttgctggNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNaatggagaaaaattttgatttttag tggggggaaccaacccaggaggacactatgcacagaatgttataaataGT CTGTTTGAACCtatgtgaacccttgttgacagactttctgaactttggaa acccaggcaaacacacataatcaacacTTTAGGGGAGCCTTCCAAACTCA GACTTGCCACGGAAAATGTCAAATTGACGTTTTGATTTCAAACCCCTGTC CCCTTTCAAATAATGTCAGCCAGGGCAATCAAACTTGATCTCAAAATATT CAACCCTTATCCCGTCGCTCGTTGTAAATATTCCATCGTTGTTTTGTcac tctttttttttcctttttgctaGGGCTCGCatagtttacattttaaaaac attgtatATAATGGatataatttctaaacttttaacCAATAGTCCCAGAA TTTTTATCTCCATAATTTAAAGCGACAGAAAAAACCGTCCGTCTGCAAAA ATTTGTAGGCCGCGCGGGCAGTCAAACAAAGAGAACCCATAAACATTGGG CAGTTTGGAATGATTTTAAACAGCCGCAGCGAACATGGGCGAAGTAACAT TTGGCATAGAATGAACTTctctaaaattgatttttctaatgaaaatttct ttgccaCAAAAGAACATCAACAGATTATACCCCTACCCCCTTAACGTCCA CTTGACGTTTTCCaaaaaaactactaaaaaccacatcaaaacatcataTG CATATGAGCCGACTTTCATTTGAATTCAGCCTGAAATCCAatttgtaccg tcaactgctttaacttgggacaattggttgaaacatgagactgttgatat ctggcatGTATTTTCAGTTACTGTAAAAATTGAAAGTATGCGAAatgatt ctagctttacgatagtgccgcagaTCATCATTGGATAgcattcaattatc attatccctttacttttgcaaaaaaaagaaaaaatagaaaagttttttta ttttttactgctctattcacatattgAGTTTGAAAGATCTTTATGTggca ttttttttgcaaactttaaaaaactgatTTGGTCCTGCTTTTGGCTGGAC TTTGGCTTATTAAGTGCTTATTAAGGAGcattgggtacaaagtccaaata tgaaTTTCctgtaaattttatatgaacagTTAGGGCTATACTGTATGACC CACCGACCGACCAACTGGAACCAAGCTATTTTTAATCAACAGCCAAACCT CCAACAAACCTCTAACCCACCTACTCACTAATGTCAAATGACATTTTTCT AAGGCCGtaatcacaaataacttgtgtttgcTTTGTCCCACTGACTGatg atttttctcaattttccaATTATTTTGAGTTCAGTTGAGTTGGGAAGTTG CAAAATTGTCAGAATTTTATCCATCCTTCCCTTCACCCGTTATCTTTACT TCAAGCGCATGTTTTATTGTTTTGCGGAagaattcaatttcaaaatataa cagAGATAATATCAAACCCTCTCCTATAGTTTTGTGGGAATGTGTTATTA TGATCCCTAGATTTGATTTCTGCCCAACTCGTGGTTTAAAAATCCATTTT CCCATTTTTCGAGCCCTTTTTTTGGCACCTATGGCCTCTCAGTGTCTCAC CCTTTATATAtacatttgtttcaatccgtgatcctatGACTTggactttt tcacattttcaattttctgaaTAAAGTTGAGTTcctttgagaattttttt ttagcttGATTATTTGATTTTTAGGTGGAATTGTTATGCaaagataaaaa ataacataaatGTATCCTTCTAGATCCTTCTAGAAGAGTAGATGCaaaga taaaaaataacataaaCTAGATCCTTCTAGAAGAGTTTTATGAGTTTTTA AAAAATCCGTTATACATTATATATATTAGATACAGCTGTCTTGCTTGAAA cctttatttttcagttttgtcAATAATGAAAAcctgtttgtttttattta ttagcACTCAATACAACACCAAGAACTCTCTCAAGAGAAATCTTACCAAC TATTACAGCAAGAAAATCAATCACGCTAAACAGtacaattttttatattt tttgtttttcctttataagtttcaaacataattctactcaatttttaact ttttcgtCTAATTACGATTTAGACTATTAGTCTCTATATCGAAACatcat gatattgaaaatatatattacctgtatttactttcattttcagatgaGAA AGCTTTACACACCACAGCCTTGACATCACAAGCTACTGCCAAAGAACTGT TTGAGTGTAAgatattttgatattaaaatCACTTGTAATGTGATTGATGA TCACAATGTCAATGAGACCTAGATTATGAAAGAGTATGATTTTAGGAAGG TGGTACTTGGTTTGTTTGTAAGAATCAAAAGTCTTGTTCTCTTTCAATTC TTGGCAATTTTATTGAACACTCCCTAAGCTATTTAAAACATTATTCTTTA TTATTTCCAATGTTATCTTATGGTCGACTTATATTGATTGTTTACTTTGA CCTTTTAGTaccaaaaaacaagaaagaaggAGCAAGTCACTGGATGACTG AACGTGTTGTTGCAGTTGCCTTACTTGGAGCTATTCCTGCTGCTGTGTTT TACCCAACTCCTTTGGTGGATCATTGCCTATCTGTTTTGCTACCTCTTCA CGCTTACTggtaaatacacgcttttttttttataagaatggtgtaaatcc atttcatcatggatattcttaacttttttgggaaaatcatcctaaaatat tcttacagcattctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcttataaagtgtattct tataaaaaaaaaagcgtgtattgtctgaattgtttttatttcataataTG AACTTGTGTTTAGGTTGTATTTCATgtgaaaaactttgattttctttgCT TAATAATACCTAAAGTTCGTGtctttttctccattttagATTGGATTCCT TTACTCATATTATTCTGTCATATTTTGTTCGGCATGAATTTCATGATACC CGTTCTAACGGCTTTTCTCTCTCATTATTTTTTAAGGGGAGTCAACGCAA TCATCGGTGATTATTTGTATCGTCCATTAGTACCAGTCACCAAACTAGGC TGGGCTGTAACATGTGTATTGACAGGTGCCGGACTTATTTACTTGAACAT TTATGATGTTGGtattgtcaaattttgtcaaatggTTTTGAATTTATAAA GGAGTGTAAAAAACGGATTTGGAAAGAAGTATGAAATCTTTTGTTTGTCT TGACATATAGATTTGGTAAAGATGTAAAAcaaatatatttatttatatGA AGCTGAATGGCTGTTGAGTAAAGGGATATATTTGTCGGTGATGTTTGTTT GAAAAGCTGAAAGACTGAAAATTCCtgttttttgcatgaaaaatacaaat ggtttaaaaatttaacaaaggAATCAAGGAATACTATAATTTTTAACAAC TTTAAAGGTTTAGATTTAAATCTGAAAAAGGTCTTACAACTGCATGTTAT TAACAGATTATTTTTAATTTGTGATTATCATTGCATTTAATTGCaagtat caaaatatttttgtcaatcttTTTTTATCGGCGGAGTCCGCTTAAGTAGA TAATAAATTGTAATaaacaaacttaaaaaatgaaactcttacctaatttt aaaattctttgttttatgttttcttcAATATAGTTGGAGTATGGCGTCTC TTTCTCTTCAGAAAATTTGAGTCGTTGGAATTAGCTTCTAtcagcacttt ttttctttgaatttttctattgttcgtACTGTCGGGTTCATTAAAATTTT CCCTGATGTACTACTGCATGAATAATCTTGtcatacaaagaaacaaaaaa tgttcTAGAAAACAACAAATTCATATGactttttatcatatttttaccAC ATGTTTCGTTTACGTGTTTTCATAATTATTCCCTCCCTCGTACTGTTTCA ATCCATCACTTTTAgacattttttcttatttttgactaTCATTTTGAGTA TGCATTTCAGCCctgcttttttaaaagaatcagaCCAGCTTAAACCAGCA TACgtttaaaatgctttttttagtTATATACAAGTTTTGTAGTTCATGCA TCTGTATATAACGGTTAAAAATTTTCCTGCCCAGTCTTTTGTGTcagaaa ttttaatttcaaattataaattatgtcttcaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011069TCONS_00011069Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011069-proteinTCONS_00011069-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000121supercontigsc0000121:27147..34429 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
91.11 87.09 128.03 128.97 82.54 60.23 83.18 85.34 71.1 75.08 56.06 73.85 61.74 61.37 67.26 76.01 124.59 132.82 47.92 47.64 132.72 129.26 80.22 81.94 76.71 70.87 95.52 90.48 93.83 83.12