XLOC_006016 (gene) - C. hemisphaerica

Overview
NameXLOC_006016
Unique NameXLOC_006016
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000109:188877..192905-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006016 ID=XLOC_006016|Name=XLOC_006016|organism=Clytia hemisphaerica|type=gene|length=4029bp|location=Sequence derived from alignment at sc0000109:188877..192905- (Clytia hemisphaerica)
GTTTGACGTCATTGCAATCATAAAAACGGAAAATGACAATACAGTATATG
GCCCCCAAAACGGAGACGGCCCCCAAAACGGAGGTTTTCATTAAAATGAA
GATTCTGACTTGTAGATTTATCAGAATTAAACGATTTTTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTAACACCAAAATT
AGATAAAAATTGCATATAACTCACTCTAGCTCCTTGGATATTGAAAATAA
GTTATGAAAACGGGGTATAGAAAACTTTCTACACCTAGATTTGAGAGAAG
TTTCAAATTTGATCGCCGTTTTGGGGGCCACATACTGTACAAAGAATTGG
TACAACTAGCAGTGAGATGCGCATATAAGAAAAGAAGCTCTTTTGTCTAA
ATATGAAGTCTAAGTAATAAAGTATAGCCGAATGTGAGAAATGAAAACTT
TTTATTGGCTGGGAAAGGTTTCGGCTATACTTCATTGTTGATTGGCTTTA
TGTTTTAGTTTAAACTAGCCGTCACCCGGCGTCGCACCCGCCGAGTAGAG
TGTTGTTGAACACATCAAAAGTCCTTTGGATGGTGGGGGGAGGGTAATAA
GGTTAAATTCTAAGCCCAAAGAACGAAATATTACCACTTATCACTGATCG
AAGCTCGAGAAATCGCATATTTAATGTTTTGTGACGTTATTTGGGCCCTA
AATGACGTCATCGAAAGTGCAATTAACTTTTCAATTTATTTTTTGATCGA
CTCAAAAGATTCTCTTGCTGATTTCCGATCCAATGAGGGGTCAACCATTG
CATAAATCCTTCTCAAACTCGAAATATTGTATTTTCCGTTTTTAATGACG
TCATCGGACCGAAAAAGCCTTAATCTGGATATTTTTAATTTCGAAAGTTT
CTATATACCCACTCTTACCCCCCAACTAATTCCACATAAAATTTCCGATC
CAATAAGGGGTCAACGACCTCCCAACTCCTTTTTAAACTCGAGATATCGC
ATTTTTCAGGTTTTGATGACGTCATCAACTGAAAACACCTGAAAATTCAG
CCAAATTTCTAAGTCACACTCAAGCCTCATAACCCCTCCCATCTTATTCT
CCATAAAATTCTCGATCCAATGAGGGGTCACCGACCTCCCAACTCCTATT
CAAACTCGAGATATCGCATTTTCAAGTTTTTCCCAGATCTGTGACGTCAT
TGGGTCCCTTTACCCCTAATGTTGTCAACGGTCAATTCGCGAATTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTCGCGAATTTTGAAATTTTTGCGGTTA
ACGGGTAGCTTATGCCCCAAGGGTCCCAAAAAGCTAAAAAACGTCAATTA
TTTCCACGGGAAAGTGGGTTTTTAAATTTGCGAAAAATTGACACTGCAAC
GACTTCTTTAAAAAAACGCTAATTTTCACTCTTCCCCTGACCACTTTCGC
TTTCGTTTTCAACCACCCACCCAACCAACCAACCATCCAACCAAAAATCG
GTCACGTAACTCTCGAACCCCCATCTCAAAAATCCATAATGGCCCCCCCA
CGGCTCACTCACATTAGACTTTTAGTATATAGATTAGTATGTACTATTTA
TGAAAAAACAAGGGTGCACGTAATATAATATTAAAATACTGCAGATTACC
AAGAAAATTATAATCTGTAAGGCGAGACCAATTTCATTTGTTGTTCTACG
GGCCCGACCGACCCTATTTTTGCTAAAATCAAAAAAATAATAATGAATTT
CCACTACAATACATTTTACACACTAGTTATTTGTAAGAATTAAATTTGAA
TAAAGCTGAAAATTAATTCAAGAAATTGAAAATCAAGCATTAAGATTTTA
TTATGATCTTCATCGAAGATAAAAAAAGTGAAATTTTGATCCAGATATTT
TTTTGGAAAACATTTTCGATACTTTACCAATCCTGATAAATTAAAAGTTT
ATTCTTATTTTACCGACCGACCGACCCATATTTTGCTAACGATCTGCCCG
TAGAACAACAAATTAAATTGGTCTCGCCTAAATTGCTAATATTCCGAGTA
CAACAAACGAAAATATACTGATGTTAAAAAAACAAAAAATAAAATATACA
TTGACCTGATTAGGCCTCAGAGGCTCAATTCATTTCAGCACATTTAATAC
AGAAGAACTAAGAAGTTGCGAATTTCCATTCACGAGGAGATTAAAGGAAG
GACAAAGGATTCTCTCATTTTTCGGAGCACAAAAATAAAAGCTTTATTCA
GTCGATACTAAAGGTTGTTGCGTCAGAAGGAAAATGTTACTGGGAAATGT
TTGCTTATCAGGACCTTTAAAAACCTATCCGAAAAGCAGTTTCTCAAAAA
AGTTTGAACAATAAGATTAAAATACTAAAATTATAAAATTTAACTTTAAG
AGGTTTGCACTCAGTCCAAATCCTCGATTTCTTCGAGAGCTTTTTCAGTC
TTTTCTTCATTTTCGGTTGTAATCTCATCTGTTTCACGAACAGTTCGTTC
AATGTTACTCTCCTCTTGATCCGTACCACCCTCCGTCGACATCATCTTCG
CGGTCTTTTTCATTCTTATTTGTCAACTTTTTAGCAGCTCTCACCATGTT
GGGTATAAAACTCCCGTAAAAATCAAGCAGTTTAGAAGTGTCAAAGGACC
TACTCGAAAAACCGGAAGTCAAACTTTGAAACGACTTTTTTACTCCTTCC
TCATTCATAGTCGCAATCGTAAAATCTAAAGGCATATATTGAAGATTTTT
TTGATTGACTCCAAGGGCACTTAAGCACGATCGCAATACTTCAGGATTCA
ACGCCTGCAAAAGAGTGTCTGTGATAAGTCCAGGGGATCGACTCTCAACA
TCAACATCTTTAGAAGCTTTCTCTACAATGCTTGTGAAATTTTCTGCCAT
TGTTTCAAAGTTTGATATATCCTTATCATCAGAATTTTTTAAACAGACTT
CCCCCACTTCCTCAAAGCTCAGTGATGTGTCATTGTCGCCAACACTCTCT
TCACTATGTCCATTCAATTTAACTGAGATATCTTTGATTCGTTTCATCAC
TATTGGATTAGCTCTCTCCTCAAACATTTCTAACATACGAGACAAATACG
GTTGACCTACTTTAAAACGACCAACGTCCTCTTTAACAATACCACGTATC
TTAGATTTAATTTCAGGTAAAACTTTCGCGATTTCAACCTCAAGTTTCTC
CTCGTCGATTCTTGAGACGTCTTTTAAAAATTCATCCTTCTCTTTTGCGT
ATTCGGCACCAACTTCCTTTCCATCAACAATGATGAGGGTGTTGGTACAT
CTCAAGACGATATTGCAATCATGATACTCAAGATAAGGAAAATCCATGTT
TCGGTTGTTAGATAAAAATATGACAGTAGGCCACTCAAACCCGGAAACAA
AGTCTGGATTCGTAATCAAAACTTTACCCTCCTTCAAAGTTTGAATTGGA
TCCAGAATCTTTTCAACAGGAAAAACAAAACATTTCACTCCACCGTAAAG
CTTAGTTCCCTCATCACGAATATACCGCAGTGGGACATCATACAAACTTT
TAGCGACCAGGAGAATTCCTCCAGAAGTTAATTTTCGGGCGTGGACAATG
GCTTCTTCGATAGTTTTCATATAGACTGGTGGAGCACCACGAGGGAAGTT
CGGTGGAGTGGGTGCTAGGCCTGCTCCGTATCGAAACGGTTTCGTCTCAA
TGATTGATTCAGACTTTTGTACAATTTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010740TCONS_00010740Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000109supercontigsc0000109:188877..192905 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.1	0	0.2	0.08	0.35	0	2.88	2.52	0.17	1.1	0.2	0.24	4.31	5.96	0	0	0	0	0.1	0.17	0.1	0	0.08	0