XLOC_005646 (gene) - C. hemisphaerica

Overview
NameXLOC_005646
Unique NameXLOC_005646
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000102:153813..162777+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005646 ID=XLOC_005646|Name=XLOC_005646|organism=Clytia hemisphaerica|type=gene|length=8965bp|location=Sequence derived from alignment at sc0000102:153813..162777+ (Clytia hemisphaerica)
ttctttttaattacaACTTGCACCATTTCTTAATTTTAATACGTTCCGAC GTCACAAATTGATACGAAAACGAACCCAGCCTTTCCTGaccgaaaacaat agaaaaagaagaacaaaagaaaGTAGCAAAAACAATAGTATTCTTTTGTA AACAATTTCGTAACAATTTAATGGGAAAATGTAACCTTGGTATGGTATAT AAAGTGATGGGTTTTTCATTTGGTTCATCACATTTGAAAACAAACACTAA AGAAGAAACACTTATACAATTATTAAAGACATGAGGTTAGCTTTTGTGCT CCTCGCAGGACTGGCTGCTCTGGCAGTAGCCGAATACACAGTTGATAAAA GTAAgtgaattatttaaaaaaattattattaatttttgggaggTATCGCT TTGTCAAAATAAGTACAGATGGGGGCGCTTTTTGGTTTGGTACAGGATTG TAATGgttctaaaaaagaaataatttgatACAATTTTACGTAAACAATCT TTCACGCATTTAGTaaaccaaattttgaaattaagtAAAATGACTAATCA ATAGTTCTTCAAAAACACGATTTTGTAAAAAGATTAACACTACTTTTAGG CTCACTCTGTATATTTGAATTATAATTTCNGATTTTGTAAGAAGATTAAT TAGCACTTATTTTACACTCACCCTGTATATTTTGaattataatttcaaaa tattgaatttacGTTAATAGAAAAGAGTCGTAAGGAAGTTTGGAAAGGAT ATCTCAGGGAAAcaataaagatttttaatttgTCGCCAATATTGGAATCA AATTGGTGCATAGCACGCCCAATTACTGATACTAATGAATTTTTAATTAA CAAGCTCGACCTAACAATAAAATTTGAATGTCTATGAAAATTTGCATTGC TTTAAACTTAGGAATAATAAggaaatttaaatgaaaatagGAGGGGTTAT TTTACATTTATATATCGTCGATTTCGATTCGATGAATTAAACATTTTATA TTATTTCAATTTCAGCATGTTCACCAATGGACCTTGCCTGGGTTCTCGAC GTCTCAGGTACAATCACATCCGAGGATCACAAGAAAACTAAGAAATTCGT CACAACACTTCAAGCTAAAATCGGTTTGGCGAATAACAACAACAAAGCTG CTGTTGTTACCTATGGAAATAACGCATACAAAAAAATTGCATGCTCCAAG TACACAACCGTCTACGATTTCAACGAGCACGTCAATCTCcttaaaaattt accaaaacaaTTTACCAACACTAGAGATGGTTTGGAAAGAGGTCAAGAAT CATTGAATGAATGTGGACAGGATAGAAAAAAACCAGTTGAACAATTCATC ATCTTGTTGACTGACGGTTTGGCTAACAGAGGTATTGGTAATGAACAAGG TCTCTTCGATGCTGCTAAGGCTATCCAAGAGAATGGTACCACCATCTTCG TTGTCGCTATCGGTCAATTCTCTGACAGCCAATTGGCACAAATGGTCGAC AAGGACAAGTATATTCATCGAACCAAAGCTATTGGCAAAGATGCTTTCGC TTCTTTAAATAATGAAGAATTTGTCAGTNGACAAGGACAAGTATATTCAT CGAACCAAAGCTATTGGCAAAGATGCTTTCGCTTCTTTGAATAATGAAGA ATTTGTCAGTAATGTCAAGGATGCTCTTTGCGCACATGTTCGACCAGAAA AAGGTAAGACTTTGTTCCTGTGTTGCgaattcattttttataaaattagt GTATTTTTCTTGAGTTTTATTGGTTGAATTAGGTCGGATATAAcattaaa attgtttcatcatcAAACGTTAATGTGCGTCATAACTATACTTTCTTCTT ACCCTCTCTTCTCCTGTCATTTAGGTCTTCTCCTGTCATTTAGGTCTTCC TTTTCCCTATCTTAAACATTTTCCTCTTCTTGTTCTGTCTATAGTGGCTT TTTATGGGAACAATTNAACATTTTCCTCTTCTTGTTCTGTCTATAGTGAC TTTTTATGGGAACAATACCTCAAATATCTAGAGGCTGTAGGAGCAAGCGA ATTGAAacatttgttattttttatcattattaccATTCAATTTCTCTTAC ATAGTTGATGGACAATGGGGACAATGGACCGCATGGAGCGAATGCCCAGT CACCTGTGGAAATGGACAACAAACCAAAAAAAGAATCTGTAATTCACCAG CACCTACTAACGGAGGAAAATTCTGTAAAGGAGCAGATATTGAAACACAA GGATGTGATGCTGATAAACCATGCCCCAATGATGGTTCATGGAGTGAATG GTCATCATTTGGTGAATGCGATGTCACTTGTGGAAGTGGTTACAAGGTCA GATCAAGAGTGTGCAGAGGAACAGCTCATGGTGGTAAAAAGTGCACTGGA AGCACAACTGATAAACGTGAATGTCTCTTGAAGAAATGTCCAGTTAATGG AGTCTGGTCAAGCTGGACTTCCTACAGCGAATGTAGTGCCACTTGCGACT ATGGTTTCAAGACAAGAACAAGAGTTTGCAAAGGAACAGCACACGGTGGA AAGACTTGTACTGGCAGCGATACTGAAAATACAGAATGTAAAATCAAAGA CTGTGCAAAAGATGGATATTGGTCAAGCTGGTCATCTTACAGCTCCTGCA GTGTCTCATGCGACAAAGGAACACACTACAGAACAAGAACTTGTATGGGA AAGAAAAATGGCGGCAAAGATTGTGTCggaaaagacaaagaaacagGAGT TTGTGACACCAAAGTTCATTGCCCAGTCAACGGATATTGGTCAAGCTGGT CATCTTACAGCTCCTGTAGTGTCTCATGCGACAAAGGAACACACTACAGA ACAAGAACTTGTATGGGAAAGAAACATGGCGGCAAAGATTGTGTCGGAAA GGACAAAGAAACAGGAGTTTGTGACACCAAAGTACATTGTCCAGTCAACG GATATTGGTCAAGCTGGTCATCTTACAGCTCCTGTAGTGTCTCATGCGAC AAAGGAACACACTACAGAACAAGAACTTGTATGGGAAAGAAACATGGCGG CAAAGATTGTGTCGGAAAGGACAAAGAAACAGGAGTTTGTGACACCAAAG TACATTGTCCAGTCAACGGATATTGGTCAAGCTGGTCATCTTACAGCTCC TGTAGTGTCTCATGCGACAAAGGAACACACTACAGAACAAGAACTTGTAT GGGAAAGAAACATGGCGGCAAAGATTGTGTCGGAAAGGACAAAGAAACAG GAGTTTGTGACACCAAAGTTCATTGCCCAGTCAACGGATATTGGTCACAA TGGTCTTCATATGGAGAATGCAGTGTCTCTTGTGACAAAGGAACACACTA CAGAACAAGAACTTGCATTGGAACAGCTCATGGCGGCAAAGTCTGTGTTG GAGAATCCAAACAATCAGGAGTTTGTGACACCAAAGTTAAGTGTCCAGTT GATGGATACTGGTCTCAATGGTCAGCATACGGACAATGTAGCGAAACATG TGGCAAAGGAACTCAATACAGAAAGAGAACTTGCGTTGGACAAGCACATG GTGGTAAAGATTGTGTTGGAGAATCAAAACAATCCTCAGTCTGTGATACA AAAAAGAAATGCCCAGAACATGGTTATTGGTCCAACTGGTCTGAATACAG CGATTGCAGTGTAACTTGCGCCAAAGGAACTCAATTCCGAACAAGAATCT GCGAAGGACGAAAACATGGAGGAGATAAATGCGAAGGAGAAGCAAAAGAA ACTCGAGTTTGTGATACCAAAGTACATTGCCCAGTCAACGGATATTGGTC ACAATGGTCTTCATATGGAGAGTGCAGTGTCTCATGCAACAAAGGAACAC ACTACAGAACAAGAACTTGCATTGGAACAGCTCATGGTGGCAAGGTCTGT GTTGGAGAATCCAAAGAATCAGGAGTTTGTGACACAAAAGTACATTGCCC AGTCAACGGATATTGGTCGCAATGGTCTTCATATGGAGAGTGCAGTGTCT CATGCAACAAAGGAACACACTACAGAACAAGAACTTGTATTGGGACAGCT CATGGTGGCAAAGTCTGTGTTGGAGAATCCAAACAATCAGGTGTTTGTGA CACCAAAGTTAAGTGTCCAGTTGATGGATACTGGTCTCAATGGTCAGCAT ACGGACAATGTAGCGAAACCTGTGGCAAAGGAACTCAATACAGAAAAAGA ACTTGCGTTGGACAAGCACATGGTGGCAAAGATTGTGTTGGAGAATCAAA ACAATCCTCAGTCTGTGATACCAAAAAGAAATGCCCAGAACATGGTTATT GGTCCAACTGGTCTGAATACAGCGATTGCAGTGTAACTTGCGCCAAAGGA ACTCAATTCAGAACAAGAATCTGCGAAGGACAAAAACATGGAGGAGATAA ATGCGAAGGGGAAGCCAAAGAAACTCGAGTTTGTGACACCGAAGTATACT GCCCAGTTGATGGATATTGGTCACAATGGTCTTCATATGGTGAATGCAGT GTCTCGTGCAACAAAGGAACACACTACAGAACAAGAACTTGCATTGGAAC AGCTCATGGTGGCAAAGTCTGTGAAGGAGAATCCAAACAATCAGGAGTTT GTGACACCAAAGTACACTGTCCATCTGATGGTGCATGGGGAAGCTGGTCA TCCTACAGCAAATGTAGTGTCTCATGCGACAAAGGAACACACTACAGAAC CAGAACTTGCGTCGGAAAGAAACACGGTGGAAAAGACTGCGTCGGAGAAG ACAAAGAAACCGGAATTTGTGACACCAAAGTACCTTGCCCGGTCAACGGA TATTGGTCAAGCTGGTCATCTTATGGAGAATGTAGCGTTTCTTGTGGTGT AGGAACACACTACAGAACAAGAACATGTATTGGAGCAGCACATGGTGGCA AATTCTGTGTTGGAGAATCCAAACAATCAGGTGAATGTGACACCAAAGTA CATTGTCCATCTGATGGTGTATGGGGAAGCTGGTCTAAATATGGAGAATG CAGTGTCACTTGTGGCAAAGGAACACATATCCGTTCAAGAACTTGTATTG GAAAGAAACACGGTGGAAAAGACTGTGTTGGAAACTCCCAAGAATCTGGC ATCTGTAACACCAACGTTTTCTGTGGAGGTAAGTTTATCGTTTATGgata tttcaattaattttataACTGGTTGCAAAAACATCTTTTTATTAAGCACG TTTTAAGAATACTTTGAATTTTATTGTACAGACAACGTAAATCTGAAAAC CTCTTTTACGAATCTAGACAATAATCAAATACTGTTCTTCTAATATAGAA TCTGTCGCCGGAGGCTGGGGAGAATGGAGTGAATATGGACCATGTAGTAA AAACTGCAAAGGAGGATACCAAACAAGACATCGTTACTGCAACAACCCTA AACCAAAGAATGGTGGAAAATACTGTGTCGGTGATGGTTACGAAAGTAAA TCTTGTGGAGGTGACGGCTACTGTCCAATTGATGGTTACTGGGCACAATG GTCTTCATACACTGCTTGCTCCAAGACTTGTGGAGAAGGACGTCAATCAA GAACACGTAAATGTAACCCACCTCAACACGGAGGAAAGAAATGTATTGGT CTTGATGAGGAGGAACGAAAATGTACCGTCCGTGGATGTAAATGTAAGTA TATGAAAATAGTTTTAACGTCGAATTCAGTAGGAAATAATCAGCTTCTCA ATGCTACAAAGAACAGGTCATATCTCCAACCAACTTGCCTCAGAATTTAG ATTCCTAAATTCATAAGTGCTAAAGTAATAATATATAAAACAGTTTaata atcaatttcaattttaaatttcagctgatGGCAAATGGTCGCAATGGTCA TCTTATGGTCAATGCAGCGTCTCTTGTGCCAAAGGAACACAAATGCGAAC AAGAACCTGTGTAGGACAAGCTAATGGAGGTAAAGGCTGTAAtggaaaag ataaacaaactcgAGTTTGTGATACCAAAGTCCAATGCGCAGTTGATGGA TATTGGTCACAATGGTCTTCATATGGTGAATGCAGTGTCACTTGTGAAAA AGGAACACACTACAGAACCAGAACCTGTGTAGGAAAGAAACACGGTGGAA AAGATTGTGAAGGAGAATCAAAACAATCTGGAGTTTGTGACACCAAAGTT CATTGCCCATCTGATGGTGCATGGGGAAGCTGGTCTTCATATGGTGAATG CAGCGTCACTTGTGGCAAAGGAACACACTACAGAACCAGAACTTGCGTCG GAAAGAAACACGGTGGTAAAGATTGCGTCGGAGAAACCAAACAATCAGGA GTTTGTGACACCAAAATTAAGTGTCCAGTTGATGGATACTGGTCTCAATG GTCAGCATTCGGACAATGTAGCGAAACATGTGGCAAAGGAACTCAATACA GAAAAAGAACTTGCATTGGACAAGCACATGGTGGCAAAGATTGTGTTGGA GAATCAAAACAATCCTCAGTCTGTGATACCAAAAAGAAATGCCCAGAACA TGGTTATTGGTCCAACTGGTCTGAATACAGCGATTGCAGTGTAACTTGCG CCAAAGGAACTCAATTCAGAACAAGAATCTGCGAAGGACAAAAACATGGA GGAGATAAATGCGAAGGGGAAGCCAAAGAAACTCGAGTTTGTGACACTGA AGTATACTGTCCAGTTGATGGTGAATGGTCTCAATGGTCTTCATATGGAG AATGCAGTGTCACGTGTGAAAAAGGAACACACTACAGAACAAGAACCTGT GTCGGAAAGAAACACGGTGGAAAAGATTGTGAAGGAGAATCAAAACAATC AGGAGTTTGTGACACCAAAGTTCATTGCCCATCTGATGGTGCATGGGGAA GCTGGTCTTCATATGGTGAATGCAGCGTCACTTGTGGCAAAGGAACACAC TACAGAACCAGAGCTTGCGTCGGAAAGAAACACGGTGGCAAAGAATGCAT CGGAGAAACCAAACAATCAGGTGTTTGTGACACCAAAGTTAAGTGTCCAG TTGATGGATACTGGTCTCAATGGTCAGCATACGGACAATGTAGCGAAACC TGTGGCAAAGGAACTCAATACAGAACAAGAACTTGCGTTGGACCAGCACA TGGTGGTAAAGATTGTGTTGGAGAATCAAAACAATCCTCAGTCTGTGATA CCAAAAAGAAATGCCCAGAACATGGATATTGGTCCAACTGGTCTGAATAC AGTGATTGCAGTGCCGATTGTGGCAAAGGAACCCAATTCAGAACTCGAGT CTGTGAAGGACGAAAACACGGTGGCGACGACTGCGAAGGAAAAGCCAAAG AAACTCGAGTTTGCGACACCAAGAAACACTGCCCAGTTGATGGTAAATGG TCTCAATGGTCAGAATACAGCGAGTGCAGTGTTACCTGTGGAAACGGTAA ACAATACAGAACAAGAACATGCGAAGGAAAGAAACACGGCGGCAAAAACT GTGTTGGAGAagacaaagaagaaaagaaatgtGAACTTGAAGCATGTCTC CCTGAACCATACTGGGCCCAATGGGGTGCATGGTCATCATGCAGCAACTC TTGTGGTAAAGGAACTCAAACTCGAGCCAGAATTTGTATGAAAGATCCAC GACAAGTTACAACCTGTGTTGGTGCTCCAACTCAAACACAATCATGCCAA TTGAAACCATGTCAACAAACACCTGTCTGTACTTGCCAGAAATACAAATT GGAACAATTTACTTGCCTCAAATGGGACAAAgcagaaattgaaaaacaat ttgaagGTAAGAATTCAATGTTAATCTTAAATTATTCATTCCGTTgaatt tctttgaaatgaaaagCGAAAACATTCAATCTAACCAAAGCTAAATCATT ATATCTTGTAATTGATCTTCTTCCAGCTCCACATTTCTtataatatttca ctttttctcatttttcaggaaaatgcTTCCTCGATAAAGCCAGATTGGCA TACAAGGCTGTCGAGAAATTGTTGACCGAACTTCGACAAGATATGGCTGA TACCAGAAAATGCAGATTGGATCTCCGAAAACAACTCATATATGGAAGCA CTGAAATCTTCACCGCTTACGATCACTGTGTCACTTTGGGCTCATGCAAG TTCATCCGATTGAGAGAACAACTTGAAGATAAACTCTTTGAATTGAAACG ACTCATCAGCACTGAAGAAGAAGGCTTCGGATCATTGAATCGTAAGTACT TCTTAGTATATCACTTATCATTGAGTTGAAAACTTAGTTGATTGCACACG AGCCCAAACTTGTTTTTATCGACAGAATCTTGAAATAATGAACGGGTATT GCTAAGGCAGAAAACTCTCATAAAAAGTCCTCATTTTGCAGAGGATTCGT AAATCGATTATTTTCTGCTATATCTTAAAAGTAATTAACAATCAATGACc aatcatttcattttatttacagCATTGAGATTACTCGGATGGTAAACTTC GAAAGAACGAAGAACGATCAACGATCAACGAATcgctaaaaaagaaaata aatcaagaCCTTCaagaagcaaaacaaaaaacattcgaatttgagATCTA CAATCGAATATGATCTAACGAACATGGTTGATCCGAGTTCGTTAAAGAtg aaaaagttacaaatttagtgaaattaaaattttattatcaattatcaatt ttattatACCACACACatcaaatgttttattttatagtttttttgtttta taaaatgacaattgttCTCCTAGGGAACTACTTTATTTGTTTATCCTTAT AATTTATatttattgaaattaaaaaaaaatcgaaaaaaaccaATTCTCAG ACCTTTTTTCTTCAGTACCGAAATGTCTATTGAATTTGTCAATGTCATAA TGTTTTAAAGGATAATTTGTATTAATTTGAATATATTAAGTGGGCCCTTT TAATGCTCCTTAATGTTTTGAAAGATAACTCTACATAAATGGAATATATT TGATATATAAACCCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010065TCONS_00010065Clytia hemisphaericatranscript
TCONS_00010066TCONS_00010066Clytia hemisphaericatranscript
TCONS_00010067TCONS_00010067Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010066-proteinTCONS_00010066-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000102supercontigsc0000102:153813..162777 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.03 0.01 0.13 0.08 0.01 0.05 2.39 1.28 1.46 96.23 19 13.61 125.87 79.24 1.57 1.35 0.05 0.03 0.02 0.02 0.03 0.01 0 0.01 0 0.02 0 0