XLOC_005611 (gene) - C. hemisphaerica

Overview
NameXLOC_005611
Unique NameXLOC_005611
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000101:72051..82437-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005611 ID=XLOC_005611|Name=XLOC_005611|organism=Clytia hemisphaerica|type=gene|length=10387bp|location=Sequence derived from alignment at sc0000101:72051..82437- (Clytia hemisphaerica)
CAAAAATGTAAACACAGACTTTCCCTTTAAATTCTTGAGCAGGGCTAAAA CTTCAAAATCATTTTTTAGACGAGCAAATCCAGACGAGTTGAACTTTTAT AGCAAAGAAGAGAAATTGTTTTTGACCAAGATGAGAGAACAATTAAACGA AGAGGGAATCATTACACTGAAGATAAATTTTGATAACAGCAATGGGAGAA GAGTGGAAAATACACAACAGCATGGGCAACATGACGATGATCAAACTTTT TCTTCAAACAAGGAGGGTGTACTTCTCAGTCGTGTTTTGAACTTAGTAAA TGAATTTCCTTGGCCTAAAAGTAACGTTTCTGTACATTATACCACAAAGA CTTCTGAAGATAGAAATGGCAACTCCTTGATAATGAAAGAACCAGAAAAT ATAAAAGCAAGAGTGACAGATTTACCAGTGAGTTTGTTCAGTTTTGTTTT GATTTTTTGATTCGACGCACTGGACTTACAAAAAAGCACTGAAAACGAAA TGTTTTGTGTCAAATAGGGAATTTTTTTTTCCACCCGACAATTCAATTAC CGTGAGTGGTCCTAAATCCGACAGCCCTGTCTAAATCCGATGGGGTCTTT CAAAGATACAAACTAAAATAAAAACAAACCTTTCACTGTGACGCAATAAA GATACCAAAGTGTCAACTAAACTGAGAGATTTGATAAACATTGATTTGAA CCAAATTACAATAATTGCTTCTTGTACAAAACATTAAGCAGATATTCAAT AACCAACACGTAAAACCTATTGAATATACGTTTTATTCTATACTTAAAGG CAAAAACAAAAGAAAAACTTGGAACATTTTTTACAAAATAAAAAGTCCAG ACGTAATTAATCGAACCAATCGAATGGTATTTTTAATCGAACTTTGCCGA ACTTACTCGAACTTTGTTGGCTGATTAATGTTCGACTAAGTTTGGTTGTC GAACTTTAGTCGAATACTCACAAATTTCTCAAAATACAAAGTTCGATTAA GTTTGATTACTGAAATCGAACTTAATCGAACTTTTTTTACAGAGACCTCG ACAATTTGATTACATTTGATCGAACTTAATCGAACTAATCGAACTTAATC AAACTTTGTCAAGTTTAATCGAACAAAAATTTGAGAAAACCCGAGCAACT GAAGGCCGCTCCACTTGCGCGTATTTCGATCGCACTTTTTGCAGCAAAAG ACAACACACGATAATTTCCAATAAATAAAACGTTGGTTTCGTTACGGTTT TTGCTATTTTTTTATNGGACACTTTGAGGAACTTTGAAGCGCCCTCGCTG GTGCAGACGTGTACCCTTGCATCCCCCTGACCAGTGGGCACCGATCAAAC TCCTCGGAACCCCGGCCGGGACCCCCAGGGGCCGTCCACGGTAGTACCCA AAGGAGGACATTTTTTGTGCCGAACTTTTTCGAACAGAGTTTTTTGTCGA ATTTGTCGAACCTTTCTTGTTGTCGAACTTTATTATCGAACAGAGTTTTT TGTCAAATTTGTCGAAAATTTCTCGTTGTCGAACTTTGTCAAACTTTATA TGTTTTGTCAAACTTAATCGAATACTCACAATTTTAGCGACTTTTAAAAA GTTCGATTAAAGAATCTAATCGAACTTTTGTTGTTCGATTAAGTTCGACA AAGTTCGATTAGTTCGGTAATCAAACTGTTCGATTAATTACGTCTGGAAA AGTGCTCACAAAATTGAATGTTCGAAATTTTTCTCTTCATCAACTTTTTA ATTACTTTAAAGTCATTAAAAATGCAAAGTGAAATTGACAATAGAACTAT TTTAAAAGTTTCTTTTCTAGCAAGAGTAAAAACATGCAAAAATCCATGAC ATCTCAAAAAAATTTGAATAAAAAAATAGCCATGTGATAATAGTGTGGTC TCAGTGCAGCACACTTGACAAGGTTTGGAACGAAGAATGAATTCGATTGA CGTGAATGTCTTTAGCGTTCAAACTGAATGAAAATAAATTAAGACTAATA AATATTTGATTGACAAAATTAAAGTAGAAATTAAATAGATGACAATAAGA CTTGAATAAATTGACCTAACTTAAATTAATCGTATTTTTAGAAGATGAAA ATCAGAAATAAACATAATTTAGATAAAACTAGCCTAACTATCCTAACCTT AGTGGTCACTGACAAAGAAGTGAGAAGCCTGTGCCAAAAGGGCAGATGTG AAATCTAGCAAAGTTGAGCCAACTGAAGTTCACAAAAGAAAACAGAAAAG GACAAAAGCTTACCGGCTGGCCCAATGTGAATTACTGTGATGAGTGACCA GGTTGTGTATAACCAACTGGGTTAAACACATGAAAATGACTGAAAAGTCT GAGTGAAATATCAACACTCAACCAACATGCAAAATAGTAAAATTTGATAT GAAAGTTCTCTTCACAACCTTACTGTAAAAGCTCTCAACATTGAATGAAA ATTGAATGCAATAAATGAGAAAAAACTGAGGAGAAAATTGCTCCCTAATT ATAAAGTCATTAAAGTGAGAAAAAGTATCTAGAGTAATTATAAAACAAAA GAAAATAAATCTAAAGTGTGAATGACATATAAATTAATTGACAGTAAAAT TAAACAAACAAATGAAATTTTTAATTGATTTTTAAGTTTTATATTTTTTT TGTAGGAACACTTTCTGTATTCAAGTGTTCACATGACAAATAGCCATGTG ATATCGTTAATTATCAAACGGCTGTTTTTGCCTACAGGTATAGAATAAAA TTTTTTATTACAAAATTGTTAACGTTTTAAACACGAACAACAGATTCAGA ATAATAGTAGAGGTAATTATTTTTACAACTCGCACTTTTTTGATCACATT AATTGACATCTTGACATTATAAAGTCCTTGCAATAGTTTATCATTCAACT TGGAGAAGGAATGTTTGTAAACATAGAATTTTTTCATAACAGTTATTTAG GGTGTCGGAATTAGGCAGGGCTGTCGGATTTGGGACCACTCACGGTATTG TACAAGTTGTAAATCAGTCTGGTGTGCCCAACGTGTTGTGTGATACAATG CTAAAGAAAAAGTTGGACATTAAAAGAATTTGCATATTGTAAAATACTGG CACTACACCTTTCCCTTAATTCATACTTCTCAGAAATGGCCTGGAAAAAT GTGCCTTCACCGTTGTGTATAAACAAACGCGTCTTTGCGTGCAAGGGGTT AGGGAAAGTGGGTTTTTCAGCTTCTAACTTTTGATAGCAATCTTCTTTTG GCAAAAGATTTTCAGGGTGGTATAATATCTCTATTTGGTTGAGTCGTGCA CAGGAGGCTTTGAGACCCATTTTCCCAACTATAGACGCTTTCAATTAACT GATAGTCATATCTTGACACAGGACTTTATTATCAAAATGAACCTTGAACC TGACTACCCAATTCTCCTGGCATGGGTTGACCCAGGCAAAGGTTCATTCA CCACTTGCCAAGTGAACCGCTGCGAGTGAGAATTGAACCTTGGTCGCCTG TACAGCAACCAAGGTCAATGACCACTATACCACAGCGCCCCCTAATATCA TGAGTAGATTGAACATACTAAAATTTGAGGGGATTATGTTTGACAGAACT TAAGAAGAGCTCAAAAACTAACTTTCCCTAAGGAAACGCGGTCAAAAACA GGTTTGTTTACTTCCAGAGACCAAACAGTGGAGAGCATAAAAATTAATCA GTTAATTAAAAACTTCAGCATAACTTGCAATAGCTCCACCTTTCAATGGA ACTTTGGTTATTTGTTGTTGTATGGTGTAGATGCTCTGTTCTGAAGGTCC ACAAAACTGAATTTGGGTCTCCTTTAAGTTTTTGTGTATTCTTAATATAA TATACACCTTTGATGATATAATAGTTGTTAGGGAGAACGCAGCAGTCTAT TACATAACTAATTACTCCACACTTCAGTAGATGCAAGTATAACAAGCAGG AAATTAGATATTACTTAGAAATAAGTTTTATTAAAATTGGCACGCTAACA TTCTTGTGAATTAGCACGCAATATCGCAAATGTTCCTGCACGACAACATA TAAAGTATTAGCTCAAGTATTAAGGGCTTTATATTGGTAATATGAGCATA TCATTTTTGTCCCTAATCGATGGAGTAATTTATTATGGGGAACTGAGTCA ATAGGTTGTCGCATTCTCCCAAACATGTTAACAACACTGGCAGAATAGAG TTGATTATTTTTCATGTGATACAGTAATATTGATAATAAATAATTGTTAT GGGATAATATAAGTTTGTCCACGCAAGAGCGTCTCTATCAGAGTGTATAT CTCACCTTTATCACTCCGTAGTATATATACACTCTGTGTGCATTGCCTGT TTGATAAAAAGATTCCTATACCTCTGCAATGATGTATGATTTATAAATAG CAACACTTCTCTTGTAGACGACTCACCTGCACTCCATCGCATCAGTTGGT TTGAAAAATCTCAAATCAGAAAAGAGAATTAGAACAGACCCTCTACAGCA ATGAATCTGGTTCTGTGTACAGAGTACATAAAATGTTAATAGACCAGGGT GCTTCTATCGTGCAGGAATTTGGAATAATAATTGAATCTTAATTAACCCT TTGGAAAATATATTCATTTTGATTCTACAAATTTATCAAGTCAAAAAAAG AAGTTAAAAGCATCTTTCTAAAAAAGGGCAGTGTTTCTGAAATATTATCT GCTGAAAAAGAGAAAATAAATGGGCTTTATAGGTATATTTTTATAAACAT AATATTGTTCTCTTGAGTGTTTCGGGAAATTAATGCCTAATATGGAGATT TTATGAGATTTTGATAATAAAGTCCTGTGTCAAGATATGACTACCAGTTA AAAAATCTTTGTGTGTCTATGTCTAGTTTCTCTCTTTAACATAACACATC AATTAACACCTAAATGGTTACAATGAAACAGACGCAATGGGGATGGGAAA GATCTTTTTTCATGAACATCTATTCTCTTTCAAACAAATAAAAGGACATC AAAGGTTTTGCTTTTAGATTAAGTTGATATCATTGGCTCACAGTACTCAT CGATTTTTCACATTGCATTGACATGAATGTGGAGAAAGATTGGTCATGAA GAGAAGCAAAGCATTTTTTTGTTTATTCAGCACTAAATTGAATACAATAT AACAATAAGAGACACCAGCCTGATATAAAACATGTGTCTGATATGATGCT GAAGCACTTTTGAAACAAAAAACCTTAATGATCGCATTAAAATATGCAAA CAGAAATTTTTTACATATACACAAAAACATTTTAATTCTACTTGTAGTCG TGTTTTGTAACAGGAATTTTTTTATCAGACACCCTGTATAAAGTTGATGA ATGGACAAGGATGTTTGATTTCCTATGATCGCGATAACTTTTACCTTTAG GTACCTGTGTTGTTGAAAATCTTCTCAATGTTAGATGTGATATCATTATG TCGTGTTTCAAAGACCTGTCAATCATGGTATAAAATAGCAAATGATGAGT TATTATGGCAAAAGAAGCTAGATTGTGATTCACATAGATGGGAAATGGTT GACCATTTATCACATCCTCAAACACATTTCGAAATGAACCCTGAATCAAC ATTTAAAGAAATGTAAGTTTTGAATTTTGAAATTAAACACTAGGGACGAA TACAAAAGTCATGCGTTGGCATTAAAATTTTAATTGTTTATAATTGTTTT ATTCATCTCTTGAGACTTTTCATTTTATGTCTCAACAGATACGGTTTTCT AGGGAAAAAAATGTTTTCTTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGTTTTTATT GATTTTAGACCTGAGGATGATCGTAAGATCGAAATATATATAGTCACAAA AATAAAATGTCACCATTGTTGGTTCATTTTGAATATCTTCTTTGAATTTT TAACATGAAATTTTTCAAATTATTATCTAAAGGGCTTATTTACTTGCTGT GAAAGCTTATAATCGGATTAACTTTTTGCAAGCTGTAATTCTGTAATTCC CTTTTTTCCTTTTTCAGATATCTGCAATGTTGTCCTGAATGTCGAACCAA ACGAGAAAAAACTTCTATGCTACCAAGCCTACCAAAACTTGGATTTTATT TTGGGTTTTCAAATCCAAAAGTTGCAATGTTTGGCTCAGGGCTTGATCGA AATGGTTTTGTCAAAAAGCTTTTGTGGGATAAACATTCACCCTTTGTTGT TCAGAAAATGTTCCCCGGTCAATTAGAAGGTATACTTTGTTTTATGTTTA AAGCGACTGGAGTCATATATAATGTGTAATACAATAATATATATAGTGTC GAAGTCAAATGCCTTCAACTACTTCAAAAAATGGCAACACCAAAGAGAAA AACTCACAAAACAAATATATACAAACATATGCGAATAAATAGAATTTCTG TCCAACTATATTCACTCAGCAGATTTGGGTATATATGTTCAATGATACGA AAGTTGTTTCGGTTATTATTAGTTTGTAGATAAATCTCACGTAAATTTAC TAGTGGAACTTCGAGGAAACTAACATTAAATTTCAATACTTAAAACAAAT CAATGATCGATTAATGCATAATTTTGTCATTAAAAATGGAGTTATATGTT ATTGTTCAAACTGCGGTGAGCAATGCATAATCATTAATCTTGGACAGATT CTGATTTTTTCGCACTGGTATGTGTACACTCTATATAAAAGTCAAGGCTT CGTATTAATATACACGTTTTTTTTTTATAAGAACGTCAAAATTTTTCGAA GCCTTCGGATGTTCTCAGTTTTTTGGATTTGAAGCCTAAAAATGTTCTTA AAATGTTCTTATTTTCAGCATTTTTTGAGCATTTTGATGTAATTTCTTAA GAAAATGCATGTTTTTAAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAACGTGTATCATA TGTTTGTTGTTTAGGCCTTGGTTCTGGGTTCACCTTATCATATTCAAGTG GATCAATCGACCTCACAACATTATATAGAATGTCAAAGTAAGAAAAACAC CTTGTTGAAAGTTTTGAAAGATAATAAGGATTCAAATTTTCGATTCAGTG GCTTTGTAGATTTGAGAACGTTTCTAACGTTAATCCCGGACTAAAAAAAT ATATATATCTAAATCATTGGTTATTGTGCTACATAGAGTATATATAAGTT GGAAATGATTTGATTATCTCCAGAATTTTATTTCACAAATGAAGAATTTT TGTCTTCTTTTTTAGGGGACTATCCCACGTATACAGTATAACAACGAATT TTGAATTCTTTTTTCGTAGATTTCGCGTCTATACAGGCAAAACCATACCA GTCAAGTTAAAAAACAATATCTTCCTCATTTTTTCCTAAACTAACCTTTC ATTATTTTGTACTTCTTTTAGAGCTGAGCGTGAAAATGACCAAAACCCAA ATGAAAGAGTGAGTAAGCTTTTGATAGCAGACACAGAGAACGAAGGACAG TTGACGTTATCACACCCTGCAAGACAGTTGTGCTCCACCATTGATGCCTT TGTTTATGTCGTCAAAGCAGATGATATTGATAAAGGTTTGGTTTTTGTAT CCCATTTTTATTTGATTTCTCATCAACATTACTTTTATCACTTTCTTTAT AACTTCTCAAACTCGAAGCCAGGCCCTTATTTCGCTACGTTATATTTCTG ATAGTGCTCACATATATCAACACGTTTTTCAGTAAAATACAAAGCTTGAC TTTAGGGACGAGATGGATAACTTCCTTATCTCTATTGTCTAGGAAAAGTT TTCGATTATTTTTTAAATGTTTAAATATTTCTCAGAAGAAACTCTCCTGC CTGTGTTGTATCAGTGTATATGTAGATTTGTCCAGCATAGCTATGTTACA TGCAAGCAAGCTCAGTCCTCAGTCTAGGCTTTTCAAATCTTTGTTTTGTT ATAAGACAAATTTATCAATTTATCCTTCGACGGGAAGACCTTAAGGAAAA TATTGGTCGGTCGGTATAATAAAAATAAATTTCTTAAAATCAGGCCAGAA AATCAGAATTTTAAGAATTTGTGACGTTTTGAAGCAGTACACTTCTTCTT TATCGATGAGCGACTTTCTTGCCATTTTATTGTGATATTTTAAGTTCTGG GAATGAGTTTACACTTTTTCAAACTTATCTGCTCAAAAAAGTCAATCCTC CAGCTTGCAAATTCAATATCCTTTTTGTTTTTTCAAAAAAAAAAATTGGA ATAAAACAGGGTAGAACAACAAATTAATTTGGTCCCGCCTAATGAAACTT CTTTTCTTTTTTTTATTAACAGTCTGTTTTGGAAGTGATGAATTAAAAGC GATGCTTGATGAAAGATGGAGTCAACCAAAGGTCCCTCTCCTCGTGTTAT GCTTGAAGTCAGATACCACCGTTCAAGCAGTACCTTCAATAACAGTAGCT GATCAATTGAACTTGAGAAGTTTATCTCGACCCTGGCAGGTAAGAAAAAA TTTCATTTAATCGCAATATAGAAACCACTTTTGAACAAGATTTATACGCT GGAAACATTACATAGAGAGTTGTATTCTTAAAGTTTCGCCACTCATGGAC GAAAATCATCTGAAAAAAATATTGACTGAAAATCCGTCATCCAGACGGAT TCGGGTGGCATGGAACTTTAATAACAAGGTCCTTTCCACGTAAGGTAACC TATGATAGAAATAATTTCGATGACATCATTCATCATGCCTAAATTGAGCA AAATCGAGAGTTTTGGACTTTTGAGTGAACATTTGGGTTAAAATTACATT TCTTCCTCAAAGCCTTCATTTTATCTCTAACAAAGGAAGCAGTTTTTTCT GTTAACCAAATACAAAATGACTGTATTCTTATGAAATTGTGTGAAATTCA CCCTAGAGGGTATTCTTAGGGTATTCTTACGATTTGGCCAATTTTCACCC TGATATTCTTATAGAGGATATTCTTATATAAAAAAGCGTGTATGAGAGAG AACTGCTCATTCTTTTCCAGTAATCTTATAAAAAAATCATAGTTAATTTC GTGATCAGGTTTTACCGAAGATGTTCAATGTCCTTCAATTAAACTACACC AAGAAAGTAAAAGTGAAATATTATTTCTTTTTCAGGTCAGACAGTGTGAT GTTCGTTCTATGAATGGTATCCTACCTGGAGTACATTGGTTCACAAAACG TATAATGTCATCTTAGAAGAAGGGACTGTACGGGGATTGCCGTAAATAAC ACCGACACATTTTTCTTCAATCACAGTTAACACCGACAACAAAAATCGCT AAAATCCTTATTTTGTCACCGCTTTGCACGTATGGCACCGAATATATCGT CACCTTTTTATCCATACATCGGAACACCAATAGTAATACCGTCACACCGT CAAACTCTTATGCTTCCCTAAAGAACATTCGACATATGCGCTTTCTTGCG TCGAAAGAGCTTATTGTGTATTGATTGATTGTGGGCATTGGTTCGTGAAA TAGCCAGTACCTTTCCAAACATATTGTCTCCTCAACATTCAATCGTTCCA ATGTTTATTGGGGCCAACAGTCCACGAAACTTAATATGTTTTCTCGAAAT AAAAAGTCTCGTTTCAACGACTCACGATTTAAGAAGAGTCTTAAGGGCTA CATACACTACACAATATATTGTCAGGCAATATATTGATGATATATTGCTG AATGTCGACAATATATTGAAAAGGTGTCCGCAATATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010001TCONS_00010001Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010001-proteinTCONS_00010001-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101supercontigsc0000101:72051..82437 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
FBXO4F-box only protein 4 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.86 15.37 8.6 7.06 13.16 10.9 17.4 20.06 15.66 22.46 28.98 13.02 35.04 29.37 19.61 28.36 11.23 19.03 31.35 44.49 20.4 16.87 23.2 23.62 30.25 48.97 42.1 42.53 55.97 43.43