XLOC_005599 (gene) - C. hemisphaerica

Overview
NameXLOC_005599
Unique NameXLOC_005599
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000101:50614..54318+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005599 ID=XLOC_005599|Name=XLOC_005599|organism=Clytia hemisphaerica|type=gene|length=3705bp|location=Sequence derived from alignment at sc0000101:50614..54318+ (Clytia hemisphaerica)
TGTTGTTTTCCTAGAACCCTTCAAATGTCTTGTGACTTTGTGGTGTATAT
TTCTCGTGTTTTCTTTTCAGAGTGCTATTTTTCTGGACGAGCATCTTTCT
ATAGAAACGTCTTTTAGACGTCTTATAGTCGTTTTTAAGGGTTCTTCTTG
TTTCAATACAAAACAATGGCTCAAGATATCAAAATCTATAACCGTTCCAT
GAAAGAGTTAGACAGTCATTTGGCTTCAGACGTTTTGTCAAGAAACAGTG
AAACAAGAAAGCCAAACCAAGAAGTAAACAGCTGAAAGATGTTATTCaga
tctctaatcctaattatTGCTTTTTATGGCTGCTTTGGGATTGAAGTTAA
ACCAGGCAATGTAAAAGGTTCATATCAATTACCGGGCGGAGATTGGGCGT
GTCCTATTCAACCTGTCGGTCTCAATCGGAGTGCAGATGTTCCAAATAAT
GTAAGTTTCCAATATTTCTTCAAATGATATTTACACCCGGGCGAAGGGGT
ACTAGGGCTGCGAGCTGACTGGAGATGAGTGCCGCCCGATATTCGACCCT
AAGACCCTTAcagggactaaaaaggagaaaacaaaggaattttaCGACGC
TTGTTTATTGggatcaattttgaccaaagttcGATCTTTCCAggggaaaa
agttgaaattttcctatttctccgacccttaatgggactgaaatttgttt
ttttgatttttccgacccttagtgggactttggagatccaaaaaaggtac
ccttaagggcggtacATACTTTACCCTTCATTTGCCCAAGAACTCTCCCC
CGGGAAATTTAATAATTTGAAAACTAGGTCAAGGTTgcaatgtattttta
aagggcCACTTGAATAATATAACTGTATCAGCTTGTATGAGAGAATAATA
CATAAtgattcaattgattttaaGGTGACGATCTGGATTTCTAAATGTGT
GGGCGGTTTCATGAAGGGCGGGATTACTTATGAAACTTGCACGCTTAAGA
AGACCTTGATATTGTTCCAAAATGACAACTCAAGGATTGCAATCAATGCT
GATGAAGACTTTTTCGATACTGTTGGTTTGATTCGTTATATTGGTAAGTG
TTCAGAAACTGTTATAAGAAAACGAAGATAAGATTGAGTGTTCTTAGCAC
CAAACCACCCTTGTCTTTTGTAGCCTTTTCCAGACGTCGTGTTTTTTTTC
TACGCTGTAACTCCTATTCTACTCTGcaattttttcgaatgtttagaaCC
CAGGTTTTTTTAGcccgattttttgacgtcactttacaCTTTCAATCTTT
TATATTGCTGGTGAGTAGAGTGTTTAGAACATTTTACAAAAAGACGGAAA
TAAGATTGGAAAGAGTCCAAGAGTCCAgctatttagattttttcatcAAC
TCACCCTtctgtaaatgtttttttttcttgcacTTTCCAAcgtttatttt
tattagttatTTCCGcacattaaaggttttattttttataagtgttcccg
ttcccgtttcatatcagacacatatttcatataaggaaagtgtctaccta
ttgttatattatattgatataagtaaaaaaatgtttttcttttcctcttt
ttgaccaatcttgctccacattgtCTTTTGTAGCCTATTCTAGACGTCGC
GGTTTTTCTTTCTACGCAGTAACTTCTATTCCACTCTGCAATATCTTTTG
AATGTCTGGAGCCCAGGTTCTCAGGCTccaaaaattagatttttggaCGT
CGCACTTCACACTTTCAATCTATTATCCATTATTGGTGAGTGTTtagaac
attaaaaaaaaacaaattaagatTGGAGATTCACTGTACCAAATCTTCTC
TGTAAAGTCCAAGAGTAAAGTCTTGCTatttggattttttcatttttcac
ccttctgtaaatgttctttttttgcactttccaacgttttttttatttcc
gtACATTGTAAGCATTCTGTTACCAGTTCTGCAGTACTGACcgctatttt
tcatttttcccgtTTCCTATAGCAAACAAGGTGTGCATCAGTTGGCGGGA
TGTTCAATACCAAGAGAGCGACCGAACAAGAGCAACAGCGGCCGCGTGTA
AGAACGCCTGTCTCGAAAATTATTATGCTCCGGCGTATACTTTGACCCAA
TTCAATGATCAAGGAAAAGCCACAAATTACGAAAGTTACACGTTCGAGAA
AAAGAGCACTTCAGCTGGAAATCGAATTGAAGGAATGAAGATTCCTGCTC
TCTTGTCTTTGTTtatattgttttgtttcttgtaATGACCAGCATGATAG
aagttagcctggatatccagactgtaaacttgtttttaatttatgaTGTT
TCTGATTTACCGCCTGGTCTTCCTAAATCGATTTGCAGCGCACATGCGca
ctttttcaatttaaatattGCGCAAGCACTTAGGCAGACCAAGCTGTAAA
AGACAGGAGCAGcagaaataagaaaatgatttaCAGTTGATATCCAGGCT
AGATAAAAGTATGATATTTTAGGAGAGGTAACAACTCTTTTGATTGACGC
CAAATATAAAAATCGAAAGAATTAAGTAGCACGTTCTTGTGTCCTTGCAC
ACGTCTtgtgattttcaatttttttttgcttaatatAATTTTATGATGAT
TTATGAGGATTTTCTTTAttgtttatattatatatactttttttcTACCC
CGATTTTACGCAATTGATTTgtacaaaatatcaaatttcgATTTATGGCA
TATATGGCAGGCATGTTTGGTTAATTATTTCTGGATCTAATCGAGGCTCC
CCATATTAAGGTGTCAAAGTTTTACTGTATTTAGAAATTGTAATTTTGAT
TAgtatatgtttttttataagcatataaaaatccgaaaacaggctcagag
atgatTAGGTCGAcaaaatgcttgagggatgcttatatccaaagcaaaaa
tttagggaaatactgaaaagcCTTAAGATtccagccaaaatcaggaaaaa
acatttttcgtaggctcaagtaacgcttgccatatgcttaatttttcccc
atatctgatcctagatatgcttacaagtgcaatgcttataaaaaaaacat
gtacaggATGTCCCGAAAATTAGTATCGAATGCACGTACTCTATTgtaca
ggcttattacaaaagttAGTTTTCAAAAACATATTAATAAATACCCCTTT
TTACTATTCCCTTGTCGCACTTCATTGGGCTAAAGATTTACTGTGATGTc
attgtacagggtgtccctaattaaagtatcgagtttgaacatgcgattga
gtagaaaagtttgtgtgtgttatcgctaaaatataagaacgttctccatc
acacaggcttatcacaaaaggtagttacaacgtataaattaatcgtagtg
acaaagaaaaaagagggcgagcttaaaatacaattttgtgaacacgcaca
tagaactttctactcatagttgtgtttcgactcgatactttaattaggga
caccctgtatatatcAAAAAGAACAAAGGACCTAGAATTATGAGCCTTGA
GGAACCCCAGCATTAACCCGCTTCCACTCCGATGTTTTCCCATTTAACAT
AACTCTTTGATACCTATCAGTTAGAAAGTTTTGTATTAAGGAAAGCAAAG
TTAGAGAAAGGGACTCCAGATTGGTTTAGTCCGCCCATTTGCCTTTGGAT
CAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009970TCONS_00009970Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009970-proteinTCONS_00009970-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101supercontigsc0000101:50614..54318 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.21	0.26	0.3	0.4	0.21	0.17	1.15	1.74	14.19	22.61	2.7	9.06	5.07	4.77	184.12	64.14	98.03	111.88	64.38	33.34	3.1	2.25	32.2	29.71	27.91	49.49	8.68	11.07	89.82	70.92