XLOC_005556 (gene) - C. hemisphaerica

Overview
NameXLOC_005556
Unique NameXLOC_005556
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000100:237405..239544+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005556 ID=XLOC_005556|Name=XLOC_005556|organism=Clytia hemisphaerica|type=gene|length=2140bp|location=Sequence derived from alignment at sc0000100:237405..239544+ (Clytia hemisphaerica)
GTCCAATCTGACAAACCGATCGACCACGCTGAAGCTTTCGGCCGAATCGC
GTTCGCTTGCCCCAGCAATGAATTGAAAGGAATCGAGGCTAAAATGAAAG
AAGCTGGTACCACCATTTTGACTTCGTACATTAGTCTGGACACTCCTGGA
AAAGCTACAGTCCAAGTTGTAATTCTGGCTGATTTGGtaagcaagaaaaa
aaaaatattgacaaaacaACTGTTATCGTCATACTTAAAAAGGAGCGGAA
AAACTTTTGGTCAACAATTCAAGTTTACTGCTAAACTAAATGGCAAATTT
TTAAAAGAGCAGGAAAATTTAAATACAATCAACTCTCAATAATCATCTGA
ACCCCTactattcaaatctttctatgaTTCGAACTGAAGTATTGGTCCCC
TCTGCTAGGAATTGGTAGAAATTATCTTCTGTATTTCCGagaaaattctt
ggtcccttgaacatcgaattagagagaatgtTCTGTAttgataaatttca
attttaatgtCGACTTGAGAATAGGACGTTTTAAAATTTCTATGAAAACG
TTCAGTTCTGATAAAATATGGGCTTAGCGCTTAAGGCCATGaagacgcac
cggactgtccaaTGGTTTTGGTCAATGTCGAAAAGTATCATTAAATTACG
CCGGTCTGGTGTTGGTCCGGTCTTACATTGCACGAATTCGTGACATTGGA
CAAACAccatacttttttctttagctttttAGCGCCCACGGGACTGATTG
ACGTcctgtccggtggtaaaaagttTTCTCATTGGACACCGGGTGGTGTT
TCCGTACTCTCTGGTACCTAATAGACGGGGGGGCTTGGAATAAGTGGgag
gggtggaaaatttttcaaaaattaattagcgcttattaggtacccgagag
taagtccggtgcgtcggaaAGGTCTTGCGTTTAGTAACTCTCCCATTGAT
TTTTTCAGGATGGACACgaaatttgttttgttggtAATGAGGGGTTCCGC
GAATTATCACAAGTCGATCCGGAAGCTGACAATCTTTTAAATAAGGTATC
GtattatttaaaatttaaaatttaggtCCTGCTCACTTATCTTTTGCTAG
TAAAAGTATTAGTCTTAGTGAAAAATTGTGGAGAAAACATCCTCCACCTT
GCCCGATGATGGAAGAAGAATCTCCCGAAACGTAGCTAAACGTAGATCCA
AgtcacgataaacttccaataagAAAAGGTCGATAAGGTCAAACTTATTT
GGATGTAGTAGATATAGTAGTGATAGGAAAGTTTGTCCATTTGATATTGA
AGACTGATAGAAAACAAATTATGTCTTGGGTGACGTCATTGGGGGTTGAT
GTAATTACTTCACACTCAATTTCTGAAGTTTTCCTGAGCTCAAACTTTGA
CAAATCCTCCATCCCATGTGAATAAATTCTTTCCGAAAGAGCCtatccgt
atattacttttcagTGAGCAATGGTtgagtggtctaaggcgtcagctgaa
aaaaaaaacagtgctTCCCGTTTCGAACTTGAGTCTTCCCGCGTTGCACT
CATTTCCGGCTAACCGTCGATCCTGAGAAAACAATCGAAAGTCTTAATat
taaatataaaatattttgcgaATCAAcccgtaaaattgagaattttcaca
tgaaaaaaaagcttagagggacaaaatacttcttggattggtcTGAAACT
TTTGTCCTTTGAAtaattagtcttttagcaggctaaaaagtgccatcatg
gttacattttattcaaagtttgaagtcttacagattttctattttgtcaa
gaatttttacgcgaatggcccttcctagaatttttaaagacatttacttt
cgcgaaaaggaccaaaattcgcgaaaatcgcgaaagtttcagCTCGCGAA
AGTCTGTACGCCTAAATTATATATTTTGCAGGCGATGGCAGAAGACAAGA
GCGACGAATGGTTTGCTAAAATGCAAGCAAGAAAACAACGGATGGAAGAA
GCTCAGGCTGCCAAGAAAGATTGAAAACAACAAgtaatttcattttgaat
attattCAACGGTGAAACTATAAGGTGTACTGAGCTAagtcaatgggctt
ttccagaaaaattttgaatatgggggggggtggaggatat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009909TCONS_00009909Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009909-proteinTCONS_00009909-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100supercontigsc0000100:237405..239544 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
52.11	52.72	19.28	16.7	49.42	45.56	50.62	58.66	52.46	48.83	53.72	44.14	42.26	41.02	45.31	47.91	47.61	40.7	31.36	36.72	23.12	23.35	38.89	41.18	50.23	54.79	22.27	19.02	53.66	42.76