XLOC_005515 (gene) - C. hemisphaerica

Overview
NameXLOC_005515
Unique NameXLOC_005515
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000099:513970..519971-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005515 ID=XLOC_005515|Name=XLOC_005515|organism=Clytia hemisphaerica|type=gene|length=6002bp|location=Sequence derived from alignment at sc0000099:513970..519971- (Clytia hemisphaerica)
ATTTGGTTTGCCAGCATTTGAAGGTTCGTTGCAATACATATGAAAACTTG
TTCCCAAAAAATCGTAAATTTTTCGTATGCGGTTGGCTCTGGTTGCTTCC
AGAACCAGCTGAAAGCAACAGTCGCGTTTTGAGTCAGCATTGTAACCATG
GTGATTACATAATCAATTGCATCTTGGCAATATTCTAAGATGGTATCCAT
AGTTGTCGGTTCAGGTTCTTGCCAAAAACCATTGAATCTGGAAAAAAGAA
TGATAAATCAATTCAAATTTCTTTAAAAAATTACAATAAAGAGAAGAAGT
CGTGATTCAGAGTTTGAAGCTGTGCAACAATTGGAAAGAGATTTATATTC
TTAGAGACTTCAAAACCATTACCTAATATTCCTCAACAGACTTTGACTGT
CGAATATTTTTCCTAACAGGGACCAGCCTTATGATAAACTTTCAAGTGAA
GTGGGGGTCTTAAGGTGGTAGTCTACCGCCAGATTTCAAAAGTCAAAAAA
TCACATTTTTTGCAATAACTCAAGAACTTCTTTACATTTCGTAATGAAAT
TTTCAGGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNGGCATGAAAACTTTTTGTGTGCATATTTTTATTC
ACATAGACTAGATGACAATGAGCAATGAGCTGGCTTCTTGACCGAAGGAA
GGCTGTTATGAGTGGCGCGCGGGCGGGTGTCAGGTGAGAATGTGCGTCTC
CAGAAGTTAGGTCCAGTTCATTATAATGCACATTTCCATCTCTGTTACAT
CATGTTGTGCTTGGAAATATCTCAGTTACATTTAAATCCACTACAAAACA
TCATGTGAGCCACCAAAAAGCACACACCGCCTCTCACCGCCTATGCTCCT
CAAAACAAAATGGCGGCAACTTAAATGTTTTTCGCAGAAATCCAGCAACA
CAACCAATGTAGAGCAACTTTATAGATTCTGTAGAGTCCTTTCTTCATTT
AAATAAATCATTTCAATCAAAGAGATTAAGTTTTGATCTAAAACTTGCCA
AGAAATCTGCAGAATCATGCTTACAGCTTGCTTTTCAGCTGGCTTTGATG
TGTTACACTACTGCAGCTACCATCTTTAATTTCAAGGATTACGTAATGCC
ACGGAAAATAATATTTTGACGCTCGAAAAGGGCGTAAAAAGAGCTTNTTT
TTGGGTAGACTACCACCTTAAAGGGTTTGTGACATGGAGGTTTAGTAAAC
AATCTAGACTTCCTGATCACCTTTTTCTCAGCTGTTGAGCCCTACATCCC
TGTTAAAAAAGAGGATTTAAATGTCGTTCTCTTGACAATGAAACCGTCGG
ATATTTCCTAAATGTATTAAATATTACATCTCTGTGTCACAGACCCGGTG
GGACCCCCTACCTCACTGCTAAATCTGGCTTAAGTTTTGTCCCCAGCAGA
AGTTGCCATTGAAGTTTTTGTTCTTGTAACAAAAGAATTTTTATTCCTGT
TGCGATGTGGATCAAGATTTTCAACCCCACTGTGAAAAGAAGTTCCACCG
GGGCTGTGAGACAGGGATGTAATATTAAAACGTATTCTAACTTTTTGAAT
ATTTCCCCGCTATAAGGGGAAATATTAGTTAAAAAGGCATTTCTCCGATC
CTTGGCTACTTACGCCCTTTTTGCGCCCTTAAAGGGGGCGGCNNNNNNNN
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AGCACTTTCTGAATAGATTTTGTATGGCCAGTGAATAATGAATATGCCTG
AATATTGTGGGGGTGTTTTAGAGATGTCCATGATATGCTGTGTATGAAAC
GCTTGGCCAGACAATTTTTGCTTTATAAAATTCCAAGAAATTTAACATCA
ACTAATATCAAGAAAAGAAGTTTGGAAGTACTTCTAACTCTTATTGCGCA
CCCTTTTCTGAAGTTTCAGAATTCTGTAGACTAGCAAACTAGTCTGTTAA
TTCATCATGTCAGAGGGAGGGAACATAAGGGTGGTGGGTGTTGTTTGCTG
AAATAGGATTTGCGTAAGGGAACGAGAAAAAATATGTCAGTGATAGTTAC
CAATTACCTAGTAAGGTTTAGTACCTTCACAAAAATACCATTCTATGTTT
CAGATGTGCATTTTTTGTTAAATTTAGTTTCGATCCTAACCTAAGAATAC
CGTAAGAATATTTTAGGATGATTTTTTCCAAAAAGTTAAGAATATCCATG
ATGAAATGAAAAACACCATTCTTATAAAAAAACGAAAACGTGGGTGTCTT
ATTGGATTTAAAGTCAGTTAGGTACCCTAAAGTCAGTTAGGTAAAAATCA
TCGCATGACTATTCGTTTCTCTTGGATTGGAAATGTTTTACCAGAAATAA
GATTGACATATAAATTTTTATTTTTCTAGTCCTGTTTAGCTTTGGAGCTC
AATTTTTCAGTATAGGTTACAAAGGTTAAAGATCGACTATATGCAATGAA
AAGTTTTATTTTCATCAATTATCCATTAAAAGTGAAGTAAAAATGTAAAA
GGCTCTCCAGAGCTGAGATAATTCAATTTAAATTCTGAATATTGAGGGCG
TCTACGATTTGATTTTCAGTATGCAATTGAGATTTCTCAGATCTGGAAAG
CCGTCACAATCAACGTCGCGCAAAAAAAATTGAGCAGGACTGGTTTTCTT
AGGCTAAGATATTTCAATTTGAATTATGATCTAATGAGGGCGTTTTTGAA
ATACGATGCAATTGTCATTTTAGATTGTAAAAACTAAAGCATTCATACTT
TAAGATGGTGTTAATTTGTTAGAAATCAAATTGAAATACCCAAACTTTAA
AAAGCCAGTTCAAGCCAAAGAAAATATTGAAAAATAATGTTTTTCGATCA
ATGTCCGAAAAACATAACATACATTCAACCTTTGCAACTTTTGTAACCTA
TGCCTTTAAAAAGAGCTATAATCCTAAACAGGCAATTTTTATTACAAAGA
TATTAAAAAATATATATAAAAAAGTATATAAATGCATGAGTTGGTTGAGA
ATACGTGCTGTCCTTGGTTTAAACCACCATTTAGGCGGCTATTTGGTTTG
CCAGCATTTGAAGGTTCGTTGCAATACATATGAAAACTTGTTCCCAAAAA
ATCGTAAATTTTTCGTATGCGGTTGGCTCTGGTTGCTTCCAGAACCAGCT
GAAAGCAACAGTCACGTTCTGAGTCAGCATTGTAACCATGGTGATTACAT
AATCAATTGCATCTTGGCAATATTCTAAGATGGTAACCATAGTTGTCGGT
TCAGGTTCTTGCCAAAAACCATTGAATCTGGAAAAAAGAATGATAAATCA
ATTCAAATTTCTTTAAAAAATCACAATAAAGAGAAGAAGTCGTGATTCAG
AGTTTGAAGCTGTGCAACAATTGGAGAGGGATTTATATTCTTAGAGACTT
CAAAACCATTACCTAATATTCCTCAACAGACTTTGACTGTCGAATATTTT
TC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009860TCONS_00009860Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000099supercontigsc0000099:513970..519971 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.08	0.19	0	0	0	0.22	0	0	0	0