XLOC_005486 (gene) - C. hemisphaerica

Overview
NameXLOC_005486
Unique NameXLOC_005486
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000099:189888..196377+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005486 ID=XLOC_005486|Name=XLOC_005486|organism=Clytia hemisphaerica|type=gene|length=6490bp|location=Sequence derived from alignment at sc0000099:189888..196377+ (Clytia hemisphaerica)
gacagattgaaactaaaatttaccgctaaatttcgaaaacaatatcaatc gtaaacaaagaaATTACTAGATttaatccgtcgtcaaaaatacggcgcat tttttaaggcgcactttttcttgcctgagaaaggttagagattctactct agcccttcaggctttaaactcaatggtttcaGTCCTTGCTCccatcaaaa tttcttcctaagcttacctaactcctacgctcacttttcctgcgtgatac cgttccagcccgactggcgtacCAGTCTACCTCTATAAAATCGAGCTGAC ACACAGTCCCGTATTGTATTGATGTTCATTTAACGTTTTATAGACGTTAG ATTGATGTTGGTAAATGCTGTGAACTGCCTTTGCTCATTACAACAttgta aaaattttttgttgttttgtggcAATTCCTAAAATCTGGTATCTTTTGCT TTAGAACCTCTCAAATGTTTCAAGACCCAGAATATGTTGTTCGGCAGCTG GCAATTATAAGCTGTGACAATTTCACGTTGAATGAACTATGTCTTCATTC GCCAGCGgttatatttttagatttttccttTCCATAGGGGTTGGGCTGCG AAATTAGGTTCCATAACTTTTACGACCATTAGAAGGTTTAAGAAAGGAAC TTTCGAGGTCACAACTTATCCGTACCTGCCatttgacacccccttctcac agatccactgggaacccttcaNCTTTCGAGGCCACAACTTATCCGTACCT GCCatttgacacccccttctcacagacccactgggaacccttcccactgg gaaaattggccaaaataacgtcttcagtggaaaattatactcttattttt gtccccgttgaaaataatcagataagaaaatcctcactgcaaaatattgt gccttttttcatccccactgaattttctgggcttgaaaataatgaaattc aaACCCcgttcataaaaaatataggaatatcaatccccatcgagttttgg tccgttattttgcCCCCACTGGCTgcaaaaatcccaccgggtctgtgaga agggtgtcATTTGATACCCTTCTTTACCTCTCGTCATTTTAGTCAAAGAA ATGAGGCGTGTCTTGTTAAgaataaaaatgtaaataaaatggtagacaaa gtaacaaaaagtttaaaagtagaatgattttttatttttggtgcttttTA GCTCAAGTTTTAACGTACGTACCTTGTTAAGATGAGTAAACATTCTAAAC GTTTTTCGTAGTTCAATGATTTGACCAGCCTATGTTCGTGTACAACTTCT GTTATTCTTTTTGGGAAGCTAAATAAACTGCCCAATTTATAAGAGCACTG GGAGCTTGCGAATTGTTCTGACGAAGCAAATTTTAATGTACATTTGTGAT TGGTGCTTTTAGAATTACTAGTTATTTTGTAACTCAAACGTCACAAAGTG TATTTCTAGTGAGCTGGAGGAAGTATAAAATGCAAttatttttgtatgaa agtaaaAACCCTTTCCAAAGTTAATGACCTCAATCAATTAGGGTTCTCAG TGATAATTGCTTTTCTTAGAATGTTTCATTCCagtgttttgaaaattgag ctCACTTTTTTATTGTCAACAAAGTTTAATGCTAAGACCAGCAATTCTGA TTAATGAGAAGCCAAAGTAAACAACACAGtcaaaaaaaacaccaaaaact aGTTTTTGGATTCCTACAGtcgaaataactcgaaaaaatctAGAACAACT CGGCCTAACTCTTTACTGTGCAAACTGGCTAATTTGCAACTGTTCTGATA GCAGTCTCATAAATGTCaaatcattttaattaatatGAAAGTATTTTAAT AaacttctaaaaatattctaCATAAGTGTTCGAATCATAAGGAAAAATAA TACATTGGATAAAAAggcgattttttttcttcaaaattacaAAGGTGCGA AGCCATTTTCGCTTACAGAAGTGCGGAGcttgaaattacaaaactgcgca aaaatttcaaaactgcACGCATAACAGATACAAAAATCATCTTTCCCGTA GGAAAGATTATGGGTAGTTAATAATCAGAGACATgggttttagatttttt tgttcAGTTTTAAGGCTCATAATTTCGGTGAATGATTCTAAAACAGGCtt tcatgaaaaaagttttcaaaaagttcaagaaaaataatcaggagtaaaaa gaaaagaaacgaaaaaagGTTATCTTCTTTCATTCATATCggtcataatt ttcaaaaaccatACAGGACTTACAATTTAGCTTGGTTTCCAAAAACTGAG ATACTTCAATTTGAGTTCTGAACTGTTGAGGGCTTTTAAGTGCAATGTTG ATGATGGTGATCTTTGAGGGCGTTTCTTCTGCACTTCTTTGATGGTGATT TATCAGAATTTAAATCGAAGAATCTCAATTTCGGGAatccaaattaaaaa ataagtaCTGTATAATTTCTGAAAAGGACGATCAATTTTTATGAAAGATT CAAAGTCTCTGCAAAAATTCACgaaaaataatatgaaaaagtttctttat gtaaaaaggtttgaaaattgcaaattgaaaaattaaaaccttaaaaagtt aaaataacaTAAAATTCCTAAAATCACCTGCTTGAAATCCTCCACCTTAA AAATTTACCTTAAAAaccaaacattttttatatatatttacaaaaaatta aaaaagatcaaatttataaaaagatgaaatgaaatatacaatgaaaataa attttaaaatgattcTGAAATTGAAAGTTTACCACAAGCTTTGGTAAACT TCATCCACGTACTGGAAGACTTGTTCAGACATTGTGGGTTCTGGGGCTGG GGGTTCTGGAATGCAGAAGTAATCATAGCTAAAAAGAAAAGGAATAGTTT TATACAGTTGAGTCTATAACtggaacacgcacggggaacagaaatttgtt ccagttaaggaaatttttagTTATGGTAGTTATAGGTAAAgtttgttaac tgaagggaccataaaacttgttcgagctCAAGAACGACGCAACAGGTACG GCTGAtacaagattttcaaaagaaaactcgaaattttccttttggggcca tccatatagtacttACGcaggggggtttagcaaaagcgtacatctattgt ttaaatgacatcatttctattgttctctgcgtgcaagggggggggagggg gtatcaaatttttggaaaatctttgcgtacttactatatggacggccccc tTCGTCGGTAAAATCACTTAAAGTTCCTCATTCACCGTAcaagatataaa aagcttccgtcgtgcctgcgTTAAAAAAACATTCGCGCCATGGAGGTTGG AGTTGAACAGACTCCATTGTTtagtaaaaactttttcttttttgtcattg aGTTAGCTTTCAAAAAGGGTTTGGGTACTAGATTTTTTTCTCTATCAGCA CAAAGTGTAAAAGAAAATAAGGCTTCAAAGCCATTCTAAGAGCTACGAGG GCTTTAAAAGATTTGAACATTCTTAGTCTACATAAtatacagctccaggc ttttaggccttactcttggtctataggcactgctatatgCAGCCACTAGT GGCCCCCACCGGGAATTTGCTTTTTAATTGGATTAAACATAATAGCGTTT TATAGAAGTTTTTAACAAAAGAAGTTTATCAAtagagatttcaaataaaa gaatgtttaaaacacagctgattggcttaggtttcgaaactctctattgt ttcactAAAACCCTagtgcgcatgcgatgtatccaaagaatttcaatatt caaaacaagagcagtgcgcatatcccgaagagtaggagttttacgctcga aatgaaggaagatatgacgtagcctaaacattctaagaacatttcaacAC AGCATACATAAAGTCACTACTTCAATGACTTGAAATTACTTACCCGATGC TTTTGGAAACACCACAAGCGCTATGGGTAAAGTATGTGGACCAGCTATCA TCTGGTTCTTGGGCAGGCTCTGGGGGTGCACTGAAACTAAAATTAAAAGG TTTGAAATTATATATATCTCTACAAGTTAGTCTTTCCTTGCCCCCCGGTG AAATTTCTATAAATCAGATATCTCGAGAACAGTCATCAAAAATATCCCTG GCCTTGTCGaaacaatagcgagtttatgtattttcacttttcaagactgt ggagtgactgaagcgatttggaaaaccTTGCAGTTaattttgacccgcaa aatcgaggacagtGAAAGTGCTTGTTTACCGTCCTCGATCAatcaggatg tagacaaattagGAGCcgaccgtctccgtcgcagaaaagcACAAATACAT AATACAATACAAATATACACAACTCGCTAATAAGTGCTATAAAGTGGAAA AATTTAATCCTGCTCCTCGCCCGGGTGAAATATGTCTCAAAGACAGTTAG ACAATATAAAGATTGAATTTCTTACCTAAGGATGGCGAATAAAGAATCAA ACTGACTGATGATCCAAAGATATATATCGGAAAGCCATTGGTCCCATGTC AGAGGTTGGATGGGCTCTGGTTCCTCTTGGATCTGGTCCCTGAAAGTTAG AGGAATTATctaattgaaattttaagaaaagttACGTACAAGTTTGTTTT CCTGAAACCGCAAAAAAAAAACCACTCCTTGGTCAAATTTTGCTGGTATA ATTAGTTCTAATAACTCGAACATACCCGGAATTTATTCGATTCCCAAAAG GGAATTTTGAGTTTTATGGTTTTTTCAGTTAATAATGCTTTATCTTATTA TATTTgaacttgtttccagtccccgtcaaggagaagcCCTCTTAAAACAC TTTATACAATTCGAACAAGTGCTGTTCAAAATCTAATTAGCGAGGGTCAA CTTCATAATACATACACGGTGCCGTGGCAAGTAATTTGATGTTGGGCGGG GGTATAGGTTCAGTGACACTGTgtgggccaaccatggtttgcccCGAGGG GAGAAAGCTTGAAATCTAgagctctaaattggctaaaaacacactcaaaa aactaaaataattcgaataaaGGCAAAGTATtccattttatgaaaaaaat cactttcatGAAAATTATTGGGGTACTAAGCTACCCTAGCCCCCTGGTAG CTACGGCACTGCATACAAacatattttctttcatttcattaGTACTCACC CAGAATTAGCGAAACCGAAGAAATAGAGAGCGATCCCTAGGACCAAGAAT CCACAAATGGTCAGTATGACTGGTTTAAGCCAGGGTGCTAGTATCTCCCT CACAGTAGGTTTGctatataaaaacaaataaacagTTGTTAGTTAATGTG TTGGCATTTCTTGGCGTTCTGCTGAATTAAAAGTTCAATCGAGAatgaca tttttaggcttgctACTTTATCTAATCGATTTTAcgatttcattttcttt tatccCGGACCCTGGAGCTGTATGAGAAATCCATTGTCTTTTCAAATTGC TAATATAGTATGTGTTGCGCAACGACTACATACGATTAAGATTTGGGAGG GGTGTATAATGTCTTTCAGACTATATTCTTAGACTATTGGGGCCATTTCT AAGCTTATTGGTCCCTATATCCTAAAGATTTTAAGTCATAAGTCTCACGT CAATACTCAGAGTTTCTGTTTCTAAGTTAAGGCATTTAAATACTACTTGA ATTCTATTTTTGCCATATATTCTGCCTATGATTGTATAGTTGGGACCcct taaaaatattcaattttgtttATCAATGATTGCGATAGGGGTTGACAAAT GATTAGGGagggagagagagagagagagagagaggagATGATTAGGTTAC TTAAAGAATTATTACCTCTGAACATCAAGCTCACTATTCAGAATAGAGTT TTTTGTCTTAAGCATTTCAGTTGATAATTGATTAACATCAGTGACGTTAG TTAAGCTAGCGACGTCCCTCTCGACGGGAACGTCTTGGGTATCATCAACC ACTACATTGTTCATCTGTGTAGAGGAGTCAGTCTTTTTGATGGTGGCAGC CGGTGCCAAGCTTGAGCGACGAGTCTAAGAAGAGAAACAAAGTACAGTAG ACTcgcgctaattcgaacttccattatattcgaatctttctataattcga acttttgTCTATAAATGGTTTGAtgatttaaacattttcaatgaaaaaat atattaattaCTTACTTGCATAATGACACGTGTTGATGTTTGAGAATATA AAGTTGTTTGAATGCACGTCTGTTGAAAGCGTGTGtagcaaaaagaaaga aattcgtTTTGACgttagatattttttttcgaaagttttaaaatgtgaaa tgacgtcaattttgtcTTATTATAGATTTGACGTCATTATGAGAAAATAT TGGATTCATTCTGCTGGTCTCCTTTCGGTGTTGTTATAGTAACAAATCAT AATGGTTGCTGAtggttttaaaaataaatccacTGATATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009803TCONS_00009803Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000099supercontigsc0000099:189888..196377 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.5 0.38 0.62 0.7 0.31 0.49 0.59 0.65 0.26 0.4 0.16 0.21 0.82 0.05 0.04 0.38 0.23 0.3 0.24 0.09 0.89 0.87 0.79 0.67 0.33 0.15 0.21 0.34 0.62 0.72