XLOC_005280 (gene) - C. hemisphaerica

Overview
NameXLOC_005280
Unique NameXLOC_005280
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000093:179095..180860-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005280 ID=XLOC_005280|Name=XLOC_005280|organism=Clytia hemisphaerica|type=gene|length=1766bp|location=Sequence derived from alignment at sc0000093:179095..180860- (Clytia hemisphaerica)
AGCATATTCAACATGATTTTAGCAACACTGAAACAGGCAGTTGGACTCAA
CTGAAGTAAAGAACGAATTATCTCAATTTAATGAAAGTGGAATATGATAC
ACAAGTTAAAACAACGATATTCATTTATTATCTTTAAAACGTCTATAGCC
TAGATTAAATTGATAGTAAAAATGAATTGTTTTTAAATAAATATAAAAAT
TATCTAGCAGTCATCACCAATGACTTGAATCCTAATAATGTCATTTTTTC
TCTGAAGCTCGTCTTCTCAATCTTTTGTAAAGAAGAACTGATCACCATTT
AGTACTAAAACTTTTGTAATTTAAAAATTCCAACAATCCATAAAATTGAA
TTATTTTGTTGATGTATCTCTTGACCGATATGTTATTCCTCGACCTTTGA
GTTCTTTAATAACACTTGATGGTAGCTTCCCACTAACAGATACAGCATAA
CATCCAGGTCTAAGTTTATCGATTCTCTGCCATTTTGCCACCCAGCTCTC
ATCTGGTGACATCATCGATACTACACCATCAAAGTTTGAGCTTGTACAAC
TCATGGTTTGTTCTCTGTCTCCTTTTAAGTATAAAAACCTTTCACAATTA
TCACATCCATCTATCTCAAACTGTTCCAATGTTTTAACCATCGAACACAA
CAAGCAAGCCCTTAGATGACGCAAGTCCTTGGGTATACTACTGAAAGCCA
TTTTTCTTTTTATTGTTTTTGAGCTTTGCATGAGAAATATAATACGTTAA
AAGTGTTTGTAGATAGAAAGATTGCGCAACTTACCTAGTCATTTGATCAA
ATGATTCAAATTGATTCAATTCAAATATGAAAGACACAGGCTTGAATTGA
AAAAGTGTTGATTTGCTGTCACCCAGCCCACAGCACAGCAATTCGACCAA
TTTTTGCATACAATTCAATATGGTGGATGGAAAGACAAAAAAGTCTATAG
TTTGACAGCTTTAGCCTAAATGATCCCCAACAATCATTTAACTAGGAGAA
GAGCTCAGAGAATGATTTATGAACAAAAATCATAAATTGAACACATTGAA
CATCAATCCGAACCAATCGAACTTTACAGGAAATTCTCAGTTCAACTTGA
CTTGGTAATCAATACTTATTGTTTGATTTTAAGTTTGATGGAGTTCGATT
ATTTTGTTAAAATTGAACAGTTCGATTGACATCCCCTGAATTATAAAAGG
TTGTGGCTTCTTTGTGCGGGTGAGAGTAGATCTTGTATTTCTTTAATCTG
GAGTTTTCTGGAGTTTCTGAATCTTTATGATGTTTCTAAGTTGGACTTAG
TCAATTTCAGAGTTCAACTTTGATATTTTGAAATTTGCCAAAGTTGAGTT
CCAGATGGGAATCTCCGAAGCTCCAAAGCTCCATACGCTACCACTAGACC
ACGAAACCTTGGCACAATTTGGAATTCAAAATCTACTTATAGTGTGTATT
TTACAGACCTATACATACTTGGGTTAGCTCCAACCCTAGGGGTATCCCTA
CCAGGGCCTAGAGACCCCTATATTTACCTACCAATGCTATTCCCAGCCCT
ATTTCGACTTTCAAACTTCCACCCTGACCCTAACTGATCTGAGGGATATG
TAATAGAGGGAAGCTGGATGAAGGACAAGAATTCCTTAGCGGATTGCTTC
TTTGTCTTTTCTATTGTAAACTGTTCATAATAGAAATCCATCTCTGTACC
CTTGAGAATTCAGTTTTCATAAGAAAAATAAAGCAGACAAAGTATTCATG
CAGTACGTCTGCACAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009423TCONS_00009423Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009423-proteinTCONS_00009423-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:179095..180860 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SUPT4H1transcription elongation factor SPT4 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.59	26.37	32.74	35.07	15.91	11.38	10.51	11.23	10.13	8.05	5.38	5.42	3.48	4.14	6.2	5.97	9.25	8.01	2.54	2.48	7.19	6.36	18.43	17.2	5.58	5.6	8.3	5.65	9.89	9.48