XLOC_005249 (gene) - C. hemisphaerica

Overview
NameXLOC_005249
Unique NameXLOC_005249
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000093:514465..517809+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005249 ID=XLOC_005249|Name=XLOC_005249|organism=Clytia hemisphaerica|type=gene|length=3345bp|location=Sequence derived from alignment at sc0000093:514465..517809+ (Clytia hemisphaerica)
CTTCTTTTATGTTTCcttcttttgattgtttttgtaGGTCTTTTTTCAAA
CCCATCCGCACGTCCAATATATCCTTTGTGGAGCGAATGTCTATTCAGGA
AGCCTCTAGGGAGTCAAAAAttactctacggtggagagagagCCTTATGT
TCTTTGGTTGACAATGCCGCTCCAATGAATGAGCTTCAATAAACTATTTT
TATTGTTTAGAATTcttttgttatcattttttttgttCTACCGCGCGTTT
TTGTTCCAGATTTGTAATGAATGAAAAAACCACCTTCAAAGATCACAGCG
GATTTTTTTCTTTGGTGTGTTATGTGGTGCGAAGTCAAAATTTGTTATAG
AGTTATCTTTTTGAGAGGGTGATAGTTTgagtaaaaaatgaaattttgga
cGTGAGCTGATCTGATTTTCTATATTTATTCTTAGACTGCGTTTGAAAGT
TTACACAGATGAAGCATTTCTTCTAATAGTTTAATTTACAGATCGAATTA
AAATCTATGCTCAAAATTGCTTTTTTGAGTGCGTGTAGTTACTTTTGAGC
ATGAAtgaatctttcttttttactaCGAAGTGAAATGCAATAACAACTTT
CTCACGTGTTCAATACGCTGTGTGGTGAATTTTGTGGAGAGATTTTCAGT
GTGTTTTGGTAGAGGTAGTTTAATTTCATGCATATTTAATGACTCTTCTA
GGTGTTTTTCTTCGATAGTTAATTGCttcataatttatttttattgcgca
atattttcttttgcttattttcaaatgatacttttcgaatgtttttgttt
ttattgcgTAACAGATGCGAGTTGTAAAGTTTTGCGTCTCAAGGGACCCT
TTGTGAAGCACTTCATAACCTTCATtcgatttattttagcgaaaaaatCA
GATTGGTCGCATATCAAGATTAAAACAGACAGATGGCGCGTGTGTATGGG
AAAGATTTTGGTgtgtaaagaaagaaaatatataaagtGGTGAGATTATA
TATTCGAACGATCGAATTCTTTGTTGTctttatttataaatcataacaaa
agagaagaaaaaagtgTTCGATTTTGTTGGCGTCAATTTTGTTTCATTGA
ttcttttttttgagaaatcacGCGAGGgaaaggaatttttttcaacattc
gaAGGAAGGATAAAGTTATTGATAGAGTTGCGAGGACCTTTCTAATGCAA
TGGTACTGGAAAGGACTTTAATATTTTTTGGCTCAATGATATCAGTATCA
TGTTTAACATTTGCAGTATGCAGTCAATTTTGGGCTGAATTTTATTTCGA
TGGGAAAAGATATCATACTGGTTTGTGGAGAGTTTGTTATGAAAAAGCAG
ACGAATGCGACTCATTTAACACGTGGTTAGACGAAGGCGAAAAAATTCCG
AGTTGGCTATCCGAAATACGTATATTAATTTGTTTGGCTTCTATATTAGC
AGGAATTGCTTTACTAACATCTTTACTTGgcattttatatttgaaaataa
aatctgttTACACATCTGTAATCAACTTTATATCTTGCGCGCTTCTTGTT
GgagtttgtttaattttttacgaaagtaaatattttcataatgaaCGACA
GTTGTTACGAGTCAGACATCTATGGGCTTTTTACTTAACCATCAGTACGG
CCGGTTGGACTTTTTTGATGGCAGTTTTTGGGATTATGGCGGACtattgc
tgttgttgttgtaaaAAAGACAGGACTTTGGAAGTAAATTATGGTGATAT
GGATATATACGATCCCGAGCATGTATGATATTTAAAATCTTGCTGTAAAT
AtttcacatactttattatgaCTAAAAACCAtaaatattatattttcttC
CTGCTATGAAAAATCTCTGAAAAGCTCATCCACCCGTACTCCTTTTACTT
GGCATTTCAATGTGCTTTTTTTCGttagaatttttttccttttctatttt
gctttttgcttttttagttttttttgttgttaagTTTAGCttctgtttga
ttttttaaggtgAAAAATCTGTCTTTCATAGCCGGAGTGAAGTGGGCACC
CCTATAAAATCACGCGtggattgattttttttgcgaACTTATGCTACTTA
TTGCTAAAATTATTCCTTTGAAATTACAGTGAGTTCGAATTTTAAGCCAA
CAGTAGTTCGGGCTAGTTCTCTTCAACACTTTTTTAAccatgaaaatttc
cagggccGGNTCCTGCTATGAAAAATCTCTGAAAAGCTCATCCACCCGTA
CTCCTTTTACTTGGCATTTCAATGTGCTTTTTTCGttagaatttttttcc
ttttctattttgctttttgcttttttagtttttttttctttgttaagttt
agcttctgtttgattttttaaggtcTTTCATCAGTGGGGATTGAGATGAA
AGCTGTTAGTAGCTGGAATGAAGTGGGCACCCCTATAGAATTACGCGtgg
attgattttttttgcgaACTTATGCTACTTATTGCTAAAATTATTCCCTT
AAAAATTACAGTGAGTTCGAATTTTAAGCCAACAGTAGTTCGGGCTAGTT
CTCCTCAACACTTTTTTAACCATGAAAACTTTATGCGGGAGAGTTTAGTA
CCTATAGTATCGCCTCGTCAATATAGTTTTAGTTTATTATGTgcattgga
aattttttttataaatataattcaGAGATTGAGACGTAAAACAAATCAGC
TTTTCGTTTTCCCAAGAACACTCACAGCCAGACTGCTTCAACGAACCTTG
AAATTCTCAGTTTTCCCACCTTTGGACAACTTTTTGTGAGAGCTGTGGCA
AATATTTCTCACAAGGTGTTCTTCATTCAATGTTGACTTAGCTGCCATTC
ttgccacccttagagagacctccacaaaatttcagccagaatTTTAGTCC
AAATTACAAGAATTTATCACCCTTTGAGGGAGTCGATTTataattttcgt
aattttgcGGGTAATTTTtgggacccttacagagactcaatttcttttta
atgatttttgtacccctttgagggacttccgagggtgtgaaaaaggacCC
TTGTTGCTCgtacatacccggcacccaaaCTCCAGAAATTAAGAGCACGC
GAAAGCTCCAaatattttggatattcttatatttTCAATGAGGGTAGATA
GAAGGGTCAAAATATAGCATACGCCAATACTAGGAGCATACTATAGAAGA
TTTTGATATTATGAATTAAACAGTTTGGCTGTCGAGAGAAGTCCTCAcct
ttttttgtaaattattgTAAAAGCTTCATTAATATATTTCTTATGCTATT
TTATGAAGATCCCTTTTTCTTACATTATacgaaacaaatttaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009377TCONS_00009377Clytia hemisphaericatranscript
TCONS_00009378TCONS_00009378Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009377-proteinTCONS_00009377-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:514465..517809 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.56	17.61	4.81	5.34	1.36	0.92	4.81	6.15	2.73	2.7	3.28	1.49	2.44	1.39	3.36	4.47	2.81	2.6	2.07	3.04	2.92	2.95	47.86	38.78	1.62	4.14	4.05	3.58	35.86	42.32