XLOC_004958 (gene) - C. hemisphaerica

Overview
NameXLOC_004958
Unique NameXLOC_004958
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000088:102522..112239+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004958 ID=XLOC_004958|Name=XLOC_004958|organism=Clytia hemisphaerica|type=gene|length=9718bp|location=Sequence derived from alignment at sc0000088:102522..112239+ (Clytia hemisphaerica)
ACCACATCGATTTTTTTTGACAACTGGTAAGTTTCGAACAAGATTTTTTA TTGGTATTTTTTGTGCTAGTAGACTTATGCTAgtctttatataaaaaatg gtTTCTTGTCAACCGGCAACCCTAATCGAAACCTGAAATCctttaaaata ttgttttcgaataataaacattttttggttAGAATATTGCAACTAGAGAA GGACTATCGCTAAGAACTACATCTCATAAAATTGCTGACAAACAAAACCC AAGAATATGTtaggggtagaatctaccacgttGACGTTCTTTTTctgaga aaatcttttaaagaatttgaaactttcagaattttaatgaaatctgattg agagtacttgtgcaaattCTTAGGGTCAAAGATTGTCTAGATCAGGCTtg atgactttattgtgaaaacATGACATAAAAACCAGCATAAACCGCTTAAC ACTCGCAATTTCAAAATGCTAATAACTTCTGAAATAATTAAGCAATCATA TTCAAATCTTGACGCTTCAAAATATTACTCATCTTCAAAAACAcagcaat tatgttaaagagcTGTATTTTATCTTTCAGGATCCTCAAACAGAATCttt aaacccgggggggggggggccctttggcaaaattgggtacagggacgtgc cgctggtcaggttTCCCTTTTTACGAGTTCCAAATTTACTAGTTTTTAAG ATGTGTATCTGAAAGTcgacttttggtaatttttgacaattttctgGGGA ATTTTTCGTCTACCTTTAGtcattttggtcaatttttaggttgaaaatgg aaaacattttcaatatttattttctgaCAGGGTCTCAAATTTACCAAATA TTCATATCTAACAGGATCCATTCTTCAAATTCCAGCGGCATGTCTCCGTT TGCCGTCGATGTCAGTGCTCCTGGTTCTgcgaaaaacatctttttaaacC ATACATTTGGGCtcttttccgacaggtggaaattttgtgatgacgtcatc gatttttATTGGATGGAAGTCATCGATTTTTTTCCTTCTGGAAGTTTGTG TCATGATAGAGAACACCTGTACCAATTTTCGTGTCAATAGCTTTTCTAGA TCGGTAAAAGAAgatggtagattctacccctgCTGGGGctacaaaaatag aaaatatctTTGGGTTAATATGCTTAAGTGAAAAGAACACAAGAAAGCCT AAGCAGCTTAAAGGCCAAGCATTGTTGGTAGTGTCAACAAATTTTCCGTG GCAGGGTCGCCATACAACTTAATATACACGAGTGAATTTTCTTTCGATAA GTAGAGCAGCTCGAGTCAGGCAAGCAATAGAGAGttaatttttctgaaat aaGATTCGACAATATCAATCGGAGGTATTAATGGTTtgtggtttttattt ttttacgcATGCACACAATAGTAATTCatataattcaatttttagccTGG ATTTGTCAATTGATAATTGCGCGcataggccccgacaaagtcaaATCTTT TCGAATAGTTGTTTTAAAGGCCCATTCCACTGCACGCTGGGCCAATTATG AATTTCTTTCCGATTGAAATTCAGATGATCTAAAGTCATTTTATCCTTCC TTTACAGACACGTTTGCAAGCTCCACAACAGTGTACGTTTCACCGAAAGG GAGAGATGAAGAAAATTGCGGCTTGAAgcacaaaaaatgtcaaactaTTG ATCATGTATTGAAAGAATCTAAAAGTAGCAATATGAAGTTGATTTTAGAG AACTCTCAGACTCAAAGCATTGTTTATCACACTCAAGGAATGTTACGCCC TGATAGTGATTATTTTCAGTTACGAATTACAAAAGAAAGCCAAAATGGAA CGAACCCGACTATATATGGAAATGAATTACCCTTCATTCAACCCAAAGGT GCTTTCAGTCTATCTATTGATCAAGTCAACCTTCAGAATCTCGTAATTGT TAACTCTACGTATCAAAACTCAAGCACGGCCATATCTTTTCGAAACTTGA TTATTAGAACAGAGATAACAGGAGATTTCATATCTACCACCAACACAAAC AGCAATCTTAACGTCACTGTACAATCTTGTGTTTTGATATCACCGACCAG GAATGCGTGGTTAAATATATCAATGAAAAAAGCGACTTCGTTTAAATCAA TAGTCAAATTAACCAACAACACCATTCGAGGAGGGCGTTTTATCATAATA AACGTTCAAGTACTTGATTTTTCacaaacaaaaatacaaaatatggTCAC TGATATCTTAAACGGGAACACGTTTCAATCCTTACCTTTCATATACTTAA AGCATATCAAAAACGCAGTTTTCCGTAGCAAAACTACGATAAAGAATTCA ACATTTGAATCTTTCATACATGCATATGATTCGTTTATAAGGATGCAAAA TCTTTACTTTCATGACACAAACCTCGAATATGGAATTATTAGTGAAGACT CGTCTTTAACAATTCGAAGATTTAAATTGCAGAATACAAGAATAAACGGA TTGGCATTCTACGTATCGATCAGCATCTTCAATGCAAATGAAATCCGAAT TGTTGACTGTGTTATGAAGAACCGTCTCATCTATGTTGATGATTCGAGTA ATGTGACAATTCAAAGCATTGAATTACAGAATGCAACAATTTATGGAACT ACATTCTTCGTATCGAGCAGCATCTTCAACGCAAATGAAATCCGAGTTGT CGACTGTGTTATGAAGAACCGTCTCATAAGTGTTCAAGATTCGAGTAATT TGACAGTTCAAAGCATTGAATTACAGAATACAACAGTTTATGAAGTGGCA TTCTTCGTATCGCGCAGTATCTTCAACGCAAATGAAATCCGAATTGTTGA CTGTGTTATGAAGAACCGTCTCATAAATGCTCAAGATTCGAGTAATTTGA CAGTTCAAAGCATTGAATTACAGAATATAACAGTTTATTATATAGCAACT TTCGTATCGCGCAGTATCTTCAACGCAAATGAGATCCGAATTGTTGGCTG TGTTATAAAGGATCATCTTGTCAATGTTCAAGATTCGAGTAATGTAACAA TTCAAAGCATTGAATTACAGAATATAACAGTTTATTATATAGCAACTTTC GTATCGCGCAGTATCTTCAACGCAAATGAGATCCGAATTGTTGGCTGTGT TATAAAGGATCATCTTGTCAATGTTCAAGATTCGAGTAATGTAACAATTC AAAGCATTGAATTACAGAATATAACAGTTTATTATATAGCAACTTTCGTA TCGCGCAGTATCTTCAACGCAAATGAGATCCGAATTGTTGGCTGTGTTAT AAAGGATCATCTTGTCAATGTTCAAGATTCGAGTAATGTAACAATTCAAA GCATTGAATTACAGAATATAACAGTTTATTATATAGCAACTTTCGTATCG CGCAGTATCTTCAACGCAAATGAGATCCGAATTGTTGGCTGTGTTATAAA GGATCATCTTGTCAATGTTCAAGATTCGAGTAATGTAACAATTCAAAGCA TTGAATTACAGAATATAACAGTTTATTATATAGCAACTTTCGTATCGCGC AGTATCTTCAACGCAAATGAGATCCGAATTGTTGGCTGTGTTATAAAGGA TCATCTTGTCAATGTTCAAGATTCGAGTAATGTAACAATTCAAAGCATTG AATTACAGAATATAACAGTTTATTATATAGCAACTTTCGTATCGCGCAGT ATCTTCAACGCAAATGAGATCCGAATTGTTGGCTGTGTTATAAAGGATCA TCTTGTCAATGTTCAAGATTCGAGTAATGTAACAATTCAAAGCATTGAAT TACAGAATATAACAGTTTATTATATAGCAACTTTCGTATCGCGCAGTATC TTCAACGCAAATGAGATCCGAATTGTTGGCTGTGTTATAAAGGATCATCT TGTCAATGTTCAAGATTCGAGTAATGTAACAATTCAAAGCATTGAATTAC AGAATATAACAGTTTATTATATAGCAACTTTCGTATCGCGCAGTATCTTC AACGCAAATGAGATCCGAATTGTTGGCTGTGTTATAAAGGATCATCTTGT CAATGTTCAAGATTCGAGTAATGTAACAATTCAAAGCATTGAATTACAGA ATATAACAGTTTATTATATAGCAACTTTCGTATCGCGCAGTATCTTCAAC GCAAATGAGATCCGAATTGTTGGCTGTGTTATAAAGGATCATCTTGTCAA TGTTCAAGATTCGAGTAATGTAACAATTCAAAGCATTGAATTACAGAATA TAACAGTTTATTATATAGCAACTTTCGTATCGCGCAGTATCTTCAACGCA AATGAGATCCGAATTGTTGGCTGTGTTATAAAGGATCATCTTGTCAATGT TCAAGATTCGAGTAATGTAACAATTCAAAGCATTGAATTACAAAATACAA CAGTTTATGGATCGGCATTATTTGTTTTTAGAAGCATCTTCAACGCAAAT GAAATCCGAGTTGTTGATTGTGTTATGAAGAACCGTCTTGTCGAAGTTCA AGAATCGAATAATGTGACAATTCAAAGCATTCAATTACAGAATACAACAG TTTATGAAGTGGCATTCTTCGTATCGAGCAGCATCTTCAACGCAAATGAA ATCCGAGTTGTTAAATGTGTTATGAAGAACCGTCTCATAAGTGTTCAAGA TTCGAGTAATTTAACAGTTCAAAGCATTGAATTACAGAATACAACAGTTT ATGGATCGGCATTATTTGTTTTTAGAAGCATCTTCAACGCAAATGATATC CGAATTGTTGACTCTACAATTGGAGGATTGGCGTACTTAACAAGTAAAAG TAATATCATCATAAAATATATATCCGTGAACAAGACGGATGTAAGTGACA TATTTGTTCGTTCATGGGAATTCAGTAAATCTACGATTACAAATGTAACG ATTCACGAAAGCAGATTTATAGATGGAATGTTTTACCTTgcagaaaaaag taatgttatacttaaaaatgcaaaaatatctGACACTAAAATAGGTGGAT ACATGTTTTACTTGTATGAAAGCACGGTAACACTAGAGCAATTCATCATT ATACGTTGTGATATTTATTGCACTTTTAAATCAATTGAGAGTGTCAAAAA ACTTGGGCCAGGTATTAAGTCGGAGTTTCTCAAAAGTAACCTCACTGTTT TGGATTTCAGGCTTTATGATAGCTGTCTGCAGGAAAACTTATTCAATCTA AAAAATGCAGATATTTCTTTGGAAGGGATTGAAGTTAAAAACAGTTCTAT AGATAAAAGCATATTGGATGTTGAAAAATCTACTGTCAAACTTCAAGGAT TTAGTTTAATAAACAATACCACTCCAAACTATGTTATTCAAATGAATAGA GTCGAAACTGCTACTTGCGAAAATCTTACCACACATGGAAATACTTTTTT AACTTTGATGAGAATTCAATcatcatatttcaaaatctCGAACTTCAAAT CAGTTCGTGATAATACTGAAGGAAAAATAGCTATCTTCGAcgttgaattt tcagatttaaaTTTGACGAACAGTATGTTTACATTAAATTCCATTGCTAT AGGTNTGAcgttgaattttcagatttataTTTGACGAACAGTGTGTATAC ATTAAATTCCATTGCTATAGGTAGCCAAATAATGAATTCAAAGCGAAGCA CCATTTATGTTACAAAAGTTGACATCGTGCTACCGAAATCAATGTCCGAG GAACTCAAAGtttggaaaatgtttggaaaacatcGTGggcaaataaaaaa cttttcaacCGTATGCGGAAATCATTTCAACCCTCAAATAAAAAGACTTA AATCATCGACAGAAATTGTTTGCAACAGATGTCCATCAGCTCAATACTCA ATGTCAATTGGAAGTTTTCAtataacttttttggaaagtgtgAGTAAACT GACAAGCAAAAAGAATGCGATTAAACTCAGCAAAATTGCACAAATTGAAA AAGCAGCATGTAAAATATGCCCAACAGGTTCTCGCTGTCCAGATAACGAT TTACTAGCACGTGACAATTTCCATGGCTTCTATGAAAATAAAACAGCGGA TTACCAATTCCTTTTATGTCCCGAAAGATACTGTTGTTCATCAACTACAA AACATTGCAAATCTCCAACAACTTGCAATTTACATCGAGAAGGAAGACTT TGTGGCAAATGTGAAGAAGGTTATTTCATCAGTTTCTTCAATAATAAATG TATCAACATTTCTGAATGTACCAATGGAAGACAACATTTCTGGAcgctat ttttcatttctttcatcgCTTTGGCTGTGCTGTTAACATTTCTTAAAGAT ATCATCACTGCTATCAAATGTGCTGGGCTGGTCATAATGGCATGTTTAAG GTAAAACAGGATTAAATATTTGCGTTCAGTAGAGTTCAAAGGACACGTTA AtcacaagtttgtaatattcacgcaaatttgtaatatttGCGGAGTTTTG TGAATTTCCAGCTGCACAGTTTTGCGATCAAGAGTTTGCAcacttttaag attttaaaaagtttagTTTTATTCTTTACCTTGAGGGATAAGATGAGagc agaaaacaatcaaattaaatttttagcaGTGCGAATATACATAGCTGAAA ATAATAGTTTATCAGCTCACTGACGTAACGATAGAGAGAGACCTCCTTTT TCGTGGATCCGAGCTTTAAGTATTAAAATAAGATATTATCACTCCCGATA ATAttaagaatttcgaaaaattaagcCAGCTCTTTGCAAAGTATACTTGT TTTGTAACGAATGAGCATTAGACTTGTACAGAATTATGTAAGAATAAAGA GTTCCAAGTcagcattttgatttttggttcaaataatatttttaattgGA TAATTCGGGTAAATTTCGGATTAACTATATTGCGAGCTACTTGATAGGAT CATTTCTAGTTATTAAAAAAGGCTAATGAATAACGTTGTTCATAAAGAAG CATCAAAATCTAGTAGtgtttttgcttggaaaagttCGGAACAGCTGGCC TTAATTCAGCTTGTTTGTAGTCTTATGAACTTGAAAGATAAATCACACTA TAAGAGGTCAAATTAAACTATTCTTGTTATATACACTTATACACTTATca catttccagaaaaattaaattttatacCGGCTGCACCACAGAAAAACGTT TTTCACTACAAACAAGgtgaataaaaattttgaatatatgattttttggt gtttttcagcctTTCTGATAGATTACCTTTCTGAGTGATTTTAGGCCAGA AAATGagtattttagaaaaacataatttttgcaagttttctttaaattag cttttctcgagttctatggtTTTTAACAAACTGAATCCTTCTCTAATgga aagaaaaacttcaacttGAATTAGTCATTTATTAAACTTGGTCCTTTTCC CGTCTGTTCGAGGtatttataatatattttatacACAAGCATATAAAAAA TTTGGTTCATTTAAGTAAGTCCTTCCTCTTTTGAGCGCATTAGAGTTTAC TCTTCAAGTGTTCGAAAATGAGGTCAAACTtctttgtggcacacccggta ttcGACAAAAAGTGctttaattatttaaaaaaattgcaaaagtacACAAG GGCGCAAGGATTCAATTACTAAAGTACGAATAAGAGAATTACATATTCTA TCTTAATACATATATTTCATAGCGATATATTgcttagacgatgttatcgt tcgttacagtgatagtaaagtcAGGAGAATATTATAcattatggcggtat acggaaaaaaatcggtgggagagtttcgaagaaagatTGGCAAACTTtac cggctgtaaactcttttcgccttttttcgaattttcttcggtTTTTTAAA TAGTGACTTGTCATAGATTATAATATAGTCTATTGTCATAGATTATAATA TAGTCTATATATTGCCTTGACGACcatgacctctatgaaacataAGTATG cgctaaaaattacaaaactgcgtaGAAATTACAAAAGTCGCACATAGCAG TACCCCTAAAccacaatcatggacaaaaggttcgtagacttctgcaatat ttgcaaaatacttcaatatcgatcaaaaacaagttcccaagaggttctgg gtgctttccgAACCCATCCAAAGCTGCTCAAGTCtatcaaagtcacccac tgcagtctaaagGGCTTGaataactggcttacaccagcatcaaaacgctg attttttgcttgtggttctcTCAAaggcaattcaaaagcaatgcaacgac ttcaaaagtgtttttcttaacttccctcccctttcagacacattgaagag tcattttacactgtttctcatcatttttttactgaaatttcatttgtcta caacattttgtccatgattgcaaAAGCACAATTTCATTCGTGGGACAAAA GTTCTCTAAATATGTGAATTCCATTTTAGGAAAACTTGCACAAAGAAAAG AGAAGAAGATGCCAACGAGATCGATGAAATGGAAGAACTACAAGCAGGAA ACAACCAAAGAAAACGTAAAGAGATTTCCACTTCATCAATCTTCAATATT TTGGTCtctttttttcagttaaaaGCTTTGATGACAGTTCAGAGCAATGA GAAAACATTAATCGATAAACTTATGAACATGGATATTATGGTTAAAAGCA GTGAAGCTTTTGAAGCACTTTGTCCTTTCAGGGGGTTTAATGTTGTATGG CGAGAGGTTTTAAACGGATATACGATCCCATTTTTATTGTTAATGACTAT TGCAGCTTTACACTTGATTGTAAAACTCTTGAAACACTTTCGACCATCAA GTTTAAGATTAACATGGTTGATGACGAGATTTTGTGTTGGGTATTATATC ATCATCGCTTTTTGCTACAAGAATATCTGCCGAACAGTCTTTCAGCTTTT GAACTGCAAAACAATGAATGAAGTAACATTCTTATACATTGACGGTACTG ttgaatgtttttctttgtgGCAGGTGGCAAATATGTTATTCTTGGTATGT TGGGTTGTTCCTTTCCCATTTGCAGTCGTTTTGGGCTACTAcctctttaa aaacaaaaagatttctgTGACGACGTTTCTCATATTTTTAATGTTCCCAA TGTTTTGTATTGTGAGAACTTGTTTCTCAAGATGGAAAAGAACTGGCGAG ACTGACAGGAGTGATTTCATTGGAAACAGATTCACAGAAATATTCGAAGA ACCCTACAGAGACAAATTCTTTTGGTGGGAATCTTGGCGACTTATCGAAC GTTTTATTGTTTCTGGCATAGCAGTATTTCTGACGAACCCTATCTATCGC ATCTTATANAATATTTGAAGAGCCCTACAGAGACAAATTCTTTTGGTGGG AATCTTGGCGACTTATCGAACGTTTTATTGTTTCTGGCATAGCAGTATTT ATGACGAACCCGATCTATCGCATCTTATACCTGACCCCCGTCTTTGTTTC CTTAACGTATTTCCACTTCCGAATGAATCCATATAAACGTTCGATGTATA TTCTAAAACGATTAGATACGGTTTCCTGGTTTTGTTTATTCATTCATTTG TTCATCAACGGAATGCGAGCTGTTGTTTACATTTATGATGTACCTGATAT CGATTTTATAAGCCATGCATTAGAAGCTGCTAATATATTGGAGGACTTAT TTTCTCCACTCTGGTATCTTATTATTTCATTCATTCTTAAGAAGTTgtgt gaaatatttttagatttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008823TCONS_00008823Clytia hemisphaericatranscript
TCONS_00008824TCONS_00008824Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008824-proteinTCONS_00008824-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088supercontigsc0000088:102522..112239 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.21 0.08 0 0.05 0.1 0.1 0.43 0.68 0.5 0.53 0.19 0.5 1.36 1.19 0.5 0.37 0.06 0.19 1.36 1.13 0.66 0.92 0 0.14 0.32 0.33 0.04 0.06 0.21 0