XLOC_004949 (gene) - C. hemisphaerica

Overview
NameXLOC_004949
Unique NameXLOC_004949
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000087:557673..562382-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004949 ID=XLOC_004949|Name=XLOC_004949|organism=Clytia hemisphaerica|type=gene|length=4710bp|location=Sequence derived from alignment at sc0000087:557673..562382- (Clytia hemisphaerica)
AAAACTTAGATTGACATCCAGATAATTAGCTATGATTTTTTTGTAATTGT CAGTTTTAATAATTTATTTTGAAATGAATTTGAGCTTTGTCAGATTTTGC AAGTGTTTTCAGTCTAGTCAGGAAATTTCATTTTTCTTTTTGGTTTAGAA AATTTGAAGCCACGCAAGATCCAGAAGCCAGAGATCATGTTCTTGTCACA ACACAGCGCAGAAAACATACCTTACGTCACAACCAAACATAACAGCCATG ATAGTTTTTGGCTACTACCTGGTGTCAGTACCTCGCTTTTCTGTTTTGGA TGTGCGATTGAAAACCTGGAGGATAAATCTGTATTGAATTACCGAAAGAA ACATATTCTAACTGACTTGCTAGAGATTCTACTTACCAATAAGACTATAT GGCAGCTTTTTGCAAGCAAAAATACAATCTATCGGCATGTGATTACTATT TTGCTCAATATCCTAATCGAGAACAGTGACAAGGAAATGGGGGAGTTAAG TTCAGAGCTATGTTTATTGATGACCAAGCGGACATCTCCTGAAAAGACTG CACCTCTTATCATGGATCAACTTTTAATCAAATCCAAAAGTCTCCCTAAT CCAAGCTTCATGACTTTCTTGAAAACTCTCATTACCGCTGTACCGTCGGT TGTATTGAGTCTTTGTGACAACAAAGCCTTATTTGTAAATGAACTTCTCC AGTTTATATCAACCTGTAAAAATGATATGCATCAACTATCCTGGTCACTT CTCGCTTCTATACTAACTGCTGTTGTATCTGAACAAATACCATTATCTCA AAACGTTTTGAAACAAATTCTGAAAACAATTGTTGATTCTAACTCAACAT CTATCACTACTGACATTGAAATCATGAAATGTTTACAACCTTACTTAAAC ATTAAGAGTGCTCAAACTTTATTACTTGAACACGAGTCTTCACATTTTAC GACGGTATCGAATTCAGTTCTTGAGTTTATCAAGAAAATGTTACTGTGTA GCAGTGAGGAATGTAAACGGATTGCCATTTCATGTCTAACTGATATTGCC AGGATTGACGGTATCGACAGCTCGAATAACCAAGATGCAGAGTTTTCATC GCTTCTCAATTTCATCATACAAAAAGGGATAACTGAATATCTACTTGAAC TTTTATCATCGTCTCAAAGTGCAGTCTTGTGCCAGCTGTTTCAATGTTTA GAGAAGTTGTCGCACTCAAAAAAATTTCATTCCCTTGGACACATGGTGTA TGGATTCTCAGCTATTCTAAAAGCTGTTCACTCTACCGACGATCGAGCTT GCTGTATGCAAGGTTTAGTTTTGATCGATTTGATTCTTGAAGGGCGCTCT ACCGAAGAAGTCAAAACAAATGTTACCGAATCGCAAATTGACGAACTTAT TAACCTCGTTAAAAAATGTTTTACCTCAAGCGACGATAAAATCAAATCCA GTGCTTTCCGTTGCTTATGTACGTTCCTACAATCTTCAAAAACCATTTCA TCAGCCAACCATGAAAAGATACTGAACTTATTTGAACTATCCTTCCAATA CATGGAGCGAGAAATCTCAACATCACTTAATTCACAATTGAAGCAATACC AGATCGATCTTGTATCCTATACATACAAATCTGTCCTCATTCTATTGCAT CACATCTCTAATAAAGAAATCACCAGCTCTGCAAGTTCAATCGATCAACA AAGTCAATCTGAACACACCAAGACCATAACAGACTTGTTATTTTTCATGT GTGATAAATACTTTATCCCCCAAGCAGTCTTGAAATTTCTACCTCGTCGG GATTTGAAATTCCAGGAAATCTTTTACCAAATGATTCTACACATCATGGA ACTTGATGTAACCAAAGGAGAAATGCTTGCCAAGAAAATGTGCGAATCTT CTTTCATATCATTGGTCTACGATTTCAAAGTCGTTGCTGCTCGTTTATCC AATGATCCCAAATTAACATCAGTGCTTGGCAAACTACTCATGTATCTTTG TATGGCGATTGACAGTTCAAATGTCCATCAATCGTTCGACGAGAATCTAC TAAACAATATAACACATTTCAACACACCAATCCAGGAATGGAGACAACTT CTGGAGGACAACGATTCCACCGAAGACTACAAATCCAGCCAACGCACAGT ACTTCTCATCCTTTTAGCATGTAGCCATATGGCTGGCTGTATATTAATTC CTCTACCCGTCTTGCAACCATTTCTCGAGAGAACAGCCATGAACCCTACT CTCCTTTTCTCACTCACGACATTGGGGAAACGATACTTTCTTTATCTATG TTGTCAAGTCGACATGTGTAATACGCAGCAATCGAGCCAATCGAATTCGA CGTACCACAAACTGATATGGCAGATTTTCACCGATCAAAAAGAACATTTA GAACTGTTATTCCATAATTCGAACCTTTTTCTTGCTTGGTTACTTCGAAT GAACATACCCAACAAGATATTCCAGTCGTTTATCGAAAGACACTTCGCCT CATCCGATCTCGATTCCTCAAATTTGACAACAGCTCTCGACCAATCAAGC ACGTTATTCATTTTCGTTGAACGATCTATCAAACAGTTCAGCTCTTTCAA CAATGAAACTGTCCAAACGAATCTTTCATGTTATTTAGAATCTCTATTGA GCAACAATATCGGCCATGAGAGATACGGCTACTTGAAACATCTCATCCAT AAAGGTTTACTCTTTACTGAGGAATTCAATCACGTGGTCATTGCTGTTTT CATTAAACTTCTTAATACCATCTCCACTCATTCAGATTCCCAAATCTCTG ACGAAGAACTCAAACTATTCTGCCGTATCATCGAATACATCCGCGAAGAC GCTGTTCCTTCTCTTTNTTCAATCACGTGGTCATTGCTGTTTTCATTAAA CTTCTTAATACCATCTCCACTCATTCAGATTCCCAAATCTCTGACGAAGA ACTCAAACTGTTCTGCCGTATCATCGAATACATCCGCGAAGACGCTGTTC CTACTCTTCTAATCGAAGCACTCAAATACAGTTATCTGATTTTGACCAGA TCCATTAAACTGCAGGATATGAAACCAATATCAATCGCTGTAAAGAATAA CACCATCTTTGCCACGTTTTCAAAGCTCTTCTTCAACAACGAAAAAGTTC TTCAAACATCAAAAACCACTCTCTTACTGGAACGTCTCTATTCATCGATC GTGTTGATGACATCCCAATTAATGCTATGTTCGCACATGTTCGCTACCAA ACCTCCCAACCCAACGGTCGTCAACAAAACCTTACTCATTGAGCTGTTCT CTTGTACCAACTTGCCAATTTTACAGTTGTCACTCACCAAATTTTGGAAC TATATTTTCCAGTTAGGCGATCAAAACGATATGATTCAATTCCTCGATTC AGAAAACAATGAATGTAATCTATCGGAAAACGATTACCAATTACTGTTGA TTATTCTAGAGAACATAGTAGGCTACCAGGAACCTCTCCTAGGCTACGGA GCTGTCTACTGTCTATTAAGTATGATCAAGAACTTACCTTTGACCAGAGA TTACTTCTTTTCGTCACCCTGGACGCAAATACTGTACGATACACACTGCG ATTCAACATTGGAAACCACCAACGCCTTAATGGTAACCCTTCACCATTTA TCTGTTTATAATAAAGAGACTTCTCCGTTAAACAATGCTCAAAACGCTCT TGGTTCACTTGCCAATACCACACAAATCATGGAAAAACCAGAATCTCAAA AACTTGGTGCAGAACTTGTGTTGGTACTTTTGAACTATGTTCGTGAGATC TTGGACCAATATCTTCATCAGATGGAGTACGATCATTTGAAGCGATTCAA AGGTGATTTGAAGAATCTGGATAAATTCTGGAAAAGTCGAGAAACACAGA CATCATTAGAATTCATTGATATATTTGGTTTGTTTTTCTCCAGTGATGTA CGTTCAATCAATGTGTCGAGCTCTATCATTGAGATGAGGAAATTGTTGGA AAAACGGATAACTGAAATTGATGATGATGAAACCGAATCGGATGATGGAG ACTAATCCCGATTTCCCCGATTCTGGTTCAGGATTTATTTTTAATTTTCC TCCTTTTCAAACTGTTTGATAACTTTTGAGATCATTAACTATACCATCTA TATCATCCTAAGGGTTTTTGATGCGCAAGCTAAAGCGGCGTTTGCGACGA CGGGAACCGTCTAGTTATTTTCTAAAAGTTTGGAATTAACTTCAGAAAGC TAGTATTGAAAGAAATCTTTGCGGCTTTGCAGCTTTGTAGGTCGATGTTA AAGTATAAACGGGTCTTAAAATATTTTGCGTCTTTAGCCACAGTCCATTA TGAGTCAATTTACTTTTTACTACAGTTATTTTTCAGTATTTTTCTTGGTA TTTTTAACATTTTTTCAATAGTTTTTCATTGTTACGTTACCAGTTTGAAC TTAATGAATGCGTTTCTTGAAAAGTAGATACACTGAGGAAAATTCTTATT TTCAGTTGAAGGCAGCAAGTTGTTTGTTGTAGGATTCGAATCCGTTGTAG AAAGAAACCTATAATCTTTAACGTTAAGATTTAAAAACCCTAGACTTTTT TCTATAGTCCTTACTTTTTCTTTCATTTAGTACGAATTTATTGATTATCA AAAGTTAGATTGTTCTATGTAATGTTTAATAAGATTTTAAAGTTTAAAAG CATTTAGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008814TCONS_00008814Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008814-proteinTCONS_00008814-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:557673..562382 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.44 0.42 1.38 1.36 1.56 1 0.62 0.69 0.4 0.45 0.23 0.26 0.1 0.05 0.12 0.15 0.21 0.15 0.09 0.14 0.32 0.38 0.08 0.14 1.86 2.07 0.19 0.14 0.36 0.3