XLOC_004570 (gene) - C. hemisphaerica

Overview
NameXLOC_004570
Unique NameXLOC_004570
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000082:89060..100255+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004570 ID=XLOC_004570|Name=XLOC_004570|organism=Clytia hemisphaerica|type=gene|length=11196bp|location=Sequence derived from alignment at sc0000082:89060..100255+ (Clytia hemisphaerica)
TaattttcgaacatttttataatttgaactCGGCGGCGCCGCCACGTCGA GCGCTAGACCCACAAAGACTCCGCCAGACGGCGAGACAAAGCTTGTCTAG TCATGTGATAACCAGGTGTTTCCATGTAAAGACTTGTCTGGCTCTCTTTT GAATCGTCTCCTCAGACAAGTTGTCTGGGTCATCCAGCGTATCAACCAAT CGATCAGGTTTGAGGAGCAAAGTAGTACCTGTAAGTACTTTTCTTTAAAT GTTCAATTTTGTAATTGTGCTTGTaatccaggcgtagttaatcgataaat agaccttttttcaaagaggccaccctgttgaatatgtagtccagcagaaa aacaatgattaaaccatgcataattattacaatatgcatgatacagaaTA ATTAttcatggctctatcattgtttttatggctggactacataattattc aacaggacatcctctttgaaaaatgaaaaaaggtctataatcgataagta atcgatggattagatatcgattaaccgaatgaatacacctttcccgtaat tcgtaaaactaatgcgcgcgcattattttgatgctctccattgtttggtc tctggaggtaaacaaacccgtttttgccNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNggccgaaatgacaagttgggctcctgtgggg gagagcggttatctttggaattggaaactattggaagccaatagagttta ttctcaagggtgtgtgtgcaaaattatACATGATTATATATTTAGGTAAA ACATagaaagacaaaagacaaatgttttttttttataagcatacaaaaat ccgaaaacaggctcagagatgcttaggtcgaaagcttaataaggatgaaa aatgaataaatttagggaaatactgaaaatccgtaaaattccagctaaaa aaagcaaaaatcaggaaaaaaacatttttcgtaggttcaagtaatgcttg ccatatgcttaatttttcaccatatctgagcctagatatgcttataagtg caatgcttataaaaaaaacatgtatattagatataagaaaacagaaaatc tttaaacattgtacatacatagatatatattttttaaacatagAAAGACA AAAGATATGCAAATGTTGGAAgacgaaataaaaataactaaTGTCTTACC TAAAGgtcaaacagatttttgccgttGAGCAAACTTTCTGATGTTAAAAG TCTATACAATCAGATACAacacaaaaatttcttcaaattttaagatAAAC TCCAAAAGGAACCCCTTGGTTGTGTTTCTAGTCACAGAGCCAAGCTAAAA GTTCATGCTGTCTTCtagaaatacacgctttttatataTAACTATAAgta tatcagggtgagatttcggagtTACAACAATAGgactattgtttagaaca ataaaaaaattaaaatattgctcaccctcagccaaagcaaagtacaccat tcttataaaaaagcgtccATCGTAGCTGATTGTTATAGCTAATCTTACTG CTTGCCTTGAAATTGTATTACACATAACTTAGTCCTTAGTCCAAaagctt ttttggaaaaagttaagcCTCTTGGCACTATTTCAGAGGGCAATTAAGAA TTGAAGGGTGCATAAGTTGTATAATTTGATTAAGTATTAGTCTTATTTTT CCTAATGTTACTACTAATTTACATAATAATGACTTCcgatagtttccagt tccaaagataaccgctctcccccacaggaacccaactgtcatttcggccg aaatgaggtttgacggttaccaatttttagagggagcacgctgcgacgga gagcgctgaaattttgcacacacacccttgagaataaactctattggctt ccaatagtttccaattccaaaggtagtcgcaaaaacttcaaaacgcaaat ttgagaatatcaaacaaatatcaaacgaatatcaaacgtcaaacgtagaa tatcaaaccaacttcaacttaatATTTGATATGCGGAACTGAGTCAATAG GTCGTCGTGTTCTctcaaatgactttttttttcttttcaatcatgcatct ctttgaaaaaaggtcaaaTCCTGCCTTACTGTAGGTAGCTTATTTCACAA ATGTAAAGCTGATTTTAGCTATGTGTTTGCGCCATTTTCATATTTAAAAG TAACATGGGTTGGACAGTCGGTATATATCTAAAACCATCTGGAATTTAGA TTTTCAAAGAGTGAGTTAGGTGAAACTCAAAATTATTGCAAGTTTGAGGT TTAAAAGATTGCTTTTTAAATATATCGGGTGTGccagaaataagttaccc tNAAATTTGAATaaagtgttataaatgcaatttgttcttaggtggccgca tctttttgattagctagactataaggcggtctccttccatatattttttg tgcatatcatcacttgtatcttttttttttttgtagtgttaaaaataaat aaatacttacttacttacttacttacctttatttgatattgtaggcagta gaaaagagattactcaaagattgtttcataatcattcagaggaaagccta ccttaaaatttgatgtaatactttttaattttactttattagttcaaaag ttatgttcgtaaacctaaaatgtcaatttaaaaaaaatgtcaaaaaaggc aAATAACGAGAGTATTAATTGATTGTAATGAATAGAGACACAAAACGATT TTATGCATCAGGAAATGTATTTCCATTATATAAAAAGCATTTATTTACAA GGTCAGGTATCCCTGTAAATACATATTCCATCATGTGTGAATCAAGACGA GCTGCAACAGTTCAAACGaggcatttttctaaaaaatttcacCTTCTCCA CCTTTCTCAACGATGATGCACACATAGAAAACTTTCGGGAACTCTtagaa agatgttgaaaattttgtggggGTTGAAGCATTCTTCAtcttgtttatgt ttatgagaaacagaagtaaaaaaaacaatagagatAAGAAAACATAAAGA GTGTTACAAGGAGCAAGACTTTGtactttaatatttttgtaaaagaagaC AGTAGTCCTTTCTCTTATAAATTGATACCcttgtttttagccttttttta attgacattttaggtttttgaacataacttttgaactaatgaagtaaaat taaaaagtaatgcatcaaattttaagttaggctttcctctaAATGATTCC GaagcaatctttgaaaaatctttctgcTACTGCCTTCAATATCAAGTCAA AGAAGGTAACTTATTTCTGGCATACCTGGTAATAATATAAATatactttt tcttaatcaggATGTCACGTTAAATAATTGAAAACTCCAGCATCAAACAA TGTTAAAAGAATCAATGCACACTATTAGAATTGTCATTTAGGAGAATGCG ACAAACTTTCTTGTCCCTATATAATTTGTTAAAGTTGAAAGATTGGTTAA ACAATGGCAAGCAAAACAAGTGCTCACTTAAATCAAATGAACTCTAGAta gctttcttttttttatcaataggtATAAAGATGATCGACTTCAATCAACT TGAAGACTTTTGTCCCATTTTGAAGGAACAAGCTCAATTACTAATACAAG ATTTCATAACTGAACAAGGCTTAAACGAACAGCTATGTCAAGCTATGCTG ACAGAATTTTCTGAATGGAATTACGATACAAAACTCATTGGAAAAGAACC AAACAATATTCTTCTGTTTTCCTGGCAATGTTTGGAATGCCCTATTTCTA AGACATTCATTGCTTGTTATCAAACTACGTCAAAACTGTCAAAATTGTTA TTCCATCAAGAAAAAGCATTAGAAGTTGTTAATGCCTCATTAAACGATAA CGAGACCTTGTTAGCATTCACAACCGTGGAATCTGCATCAAAACTCGACA GAGATTCAACTGGACAATTTGACCACACCTTTAGCTCCTACATAGCGGAA ATAGCACCTCAAAATCGTGTCTTTTCATTAAATATTGAGTGGAATACTTA CCAAAAAGTACAATTTCTGAGCCACACTTTAAAATCTAAAGACAATGTAT ACCATATGATATTTTGTAACCATAAAAACTCAATTCAGTTATATGAGCTT CACTTAAAGCGTGCTGGTGATGGGAATATCATAATGACACAGCAACCTTC TACCAAACAAATTGCTGGCCAGTTCTTATGGTCTATGTTTGACTCTAACA ACCAACGGTTATATTATCTCCAACTTCTTCCCAAGGATGAAGAAGAATTA GAGGCTGCCGCAGTCGTCACAGCAATCGATTTCAAACTTGATGGAATATA CGAATATGTCATGAATTTCATCCTCCCCATCAAACTGCGAATGGAATTAT TGCGTAATCGTTCTTACTACAACGTAGATCATTTTTCAAACATCATCTCA TGTCAGACTTTCAAGATGAATATTTTAACTGAAGAGAGAGGTTCTTTTTA TGTTTGTTTTCAACACCAAGTAACCAGCACAAAATATACAGAAGAGGAGA GCAGTGAAGATGACCAATCTGTCATTTCAGAATCTTCCACCAGCCATGAC TCAATCCTCCAATCCTCCGGCACCACTGACAGCTGTTTTGTTAACTATAC CGTCATTTGTGTTCACGGAGCATATTCAGCACATTGTTCTTCTGTTCTCC CATATGATGATGATTGTAACGAACCTCAAATTCATTTCATGTTGTTTAGT GATTACTTACTGGCCTTCATACCAGGATCATTTCTCCATTTCTTGGACAT GAGTTGTGAGCATGAACCAGTTCACAATCTTCTCATTCGTAGAAAATCCT GTTTACCGAAGATGCCAATTCGAAACAAAACCGATTACAAGTTTGTACCT TTCATGTCTGAATCCGATTCTGGAGATTCTAAAACCGAACATTTAAAGTT GCTGGAAATTACTACTCTTTGTGTATACAACCTAACTTTGAATGCTGCGT CGATGTACAAATTTTTCTTATCGTCAAAACCTCAGATTCGATTATCTATC TTACATGGCTGTTTGAATCATTTCAATCATTCCAAACTGACCAAGAAAGT CTTGGCAAGAATCTGTCAGGATCCTGCGAATTCGGATTCTTTACTGATGC TTAAAGAATATCTGGTACTGGCACCTTATGTTGAGTTGAGGAAATCTGTT TCATTGCTCGATATGAAAGTTTTTCCATTTACAACTCAAAGTTGTTATCG AGGCCAGGTTGAACGTAACTCGAGTGGCCGTCGAGACgtgtatttatctt acaaaaCTTTCAAGGAGGATTTAGTTATTCAGATCCAGAAAGTGTTTCGA TGTTGTTTAACAGGTTTTTGGAGGACTTTATTGAAAATTATGACACATGA GTCGCAATACCGAAATAAACGAGTCTCCTTGAGTATTTTCTACATGGCTG GTATCGATGTAGAGGAATCAGCGATTACTTTTAAAGCAGCTCGAGGTGGT AGGCGAAATACGTCCTTCGTTGTGATTCCCAGACCTTCTGTTGGTACTCT TGACGATTCAACCCTCCACGGAGTCGATAAATTATCGATTGATGACAGCG CAATCGATGAAGATCGTAAATTTAATGAGAATCTGAACGCGATTGCTACT CAATTAATCGCTAATTACGTGAGTCGTCATTTTGGGCAAGACATGAAACC GAGGATTGATGATTTATGCTTGAATTACATGGAGCATAGGTGTGAATCTA TTGAGCAGTTGTGGAAAGTTGTTTTGAAGTCGCTTGACTTAAGTGATGAA GGAGTGAGGTTTTGTACTCTCGATACTCCTTCAGATGAACTTGAACTAGC AGCATTTCAATTGGTGGAACGGGTTAAAGTGATTTGTGACCAGTTATGTT ATCCACAGTTGAATCGCATGAATGATTTGTTATGTTCACTAAGTTTCCGC TCGCTTCGACGGTTTCAATTCGTACGATACGTTGACGCATGCGTTTTCAA GGTGAATATCAACTTTGTGAGACGTGTCATCAAAGAAGTTCCAGAAAACA ACGAGAAATCGCAATTAATTGAAATTCTTTTAGGAAAACTATCTAAGACT GAAGTTCAGAAGATTTTATTGGAATGGAATAATCCGATCGGGCGAAAATA TTTATCGGAATACGTTTCATGGAAAATGCCGTTCAATGAGATACACACGC CTAACAATACGAATTTCGAACAAGTTTTCCCTAACGGAGATGAGTTTATG CCGTTGAAGACACTGTTACATGCATTTAAAGTTCACGGGAAAACGTCTGC CATGTTTGGTGGAAGTCGCcgagataaaaaacaaaatgatatGTTAGCGG AGACGGCGCTATATGAAACAAATATGTTGTTGAAACCTTCCGACGAGTAA CTCTGTTACTTTGAATTAACTTTTATTcgtatattttgtattttctcaGC TAAATTATTGATAACCCTTGTAGCGTGTCCGTAATAAACGCTGAACAGAG CGTATTTTTAAATGAATGACCTTTTCGAAAATAAACAGTCtcgaaactga aaaaaaattagcaaattgAGAATATTTCTAAGCTCACATAAGGCGCAAAT TACAAATCATcttaaattttgtaatttttatgaAAGGTAACGAGTTTAAG ATGGTATAGGGTAAAGATTTTCACTTTCCATCtgatttcttttgtattca aaatattatctttatgaattttatatttcatgttttagataaaagtattt tgtttgattttcttaTATTGTAGATATTCTAAATTTTGCTATTGGTCTTT ATTGGACATTTTAAAATTATGCAAGATGAAATGGTTTGAAAATAGTGTTT CACACATAAGTTCTTCATGATCAAGATGTTTttgttcacaaaaaaattct ctaatTTTCTTACTTTAGTGTTTCCCCTTGTTTGAAGTATTTTCACACCT TAAAATTCGAATTCGAAATGAAAGCATTTGGCCCTCGTACTGAGTGTGAA AATTAAGGtaactttattttcaaattgtagattttctattttcttatgAA TATTTtgtgatgattttttttaactttgattTTATAGGCAAATTGGGCTC ATTTTCCTTTTAAGGACAATTCTTTGGCATAGCACTGTTTGTTACGTGAC ACGTGACGTGTTTTTTTCTACGCCTTTTTTTAcggaaacaaaatttgttt tgtttcttcatatttaaaaagaaaaactgctTATCTTAAAGTCTCGGAAA TTTCACTTTTACTGTCATACTATTTCAAACTTTTGTTACCGCACTAGCCC TTTGGTGGTGAAGACCTCAATCAATTATTTAAAAAGTAAGGAAATAAAAA AGTCGCAgcatttttgttttatattcAGTACGTTTTTATGTAGGTGGAAT TTTTGGcttgactttttttataaaattgtacGGGAATTTGAATATAGAGa aagtatgtattttttatcTTTGGTCTACTTGCTGACTTGTTGCTTTGCAT GCtgacattttattttgaaatttaataaattaTGCTAAGGTAAATAATCA GTTAATTATTTGAGTTAATTACATTTGAGCTAATTTACACCctttacatc cctgtctcacccggtaagatttttttaatggatatagaagaatgaagaaa atgaaaaatgccgATGATAATTTTTCAATTGGCTAGGGGATCTCATAGGT CTGATGCGAGGATGCGGGATATTTCTTAGCCCCGTCGTGTTTTTTACTAC TTCTTTAAGCGGGTTTTTTATCCGTTATTTaaagcattgaaaaaatttga aaataagacAAATTTTGAACGATTGCCCACACTTTTTAGGCTTAATATTA TACTGTTTTTGTTGATCGAACGTTGCCAAATTTATTTCAGTCATtttatt cattcaaaatttcagaaataacATGTTAATTTACCCTTAGGTTCATCAAG CTCCATTTCGAATTAGCTGCTGTCCTCCTTGCCCTGTATTTAGTTTTCCT TAGCAACCATGGTTGTCAAGTCAGTTGCCAACGGAGATGTCCGACATATT GTTCTTTCGGTGGCCGGTGTTTTTGTAATGCTGGTTATCATAGCTTGGGA GGAAAACGCAGTTTATCAATCACTTACGCACGAGATGACGTCACTGGACA GGTAGTTAAAGGTAATTAAAGATTGATGAtgtattttttgttctttttta cgaGTGGTAACATGTAACGTGGAGTTGAGTTGTCTCTGATCTCATTTTTG AAACTACAATGAATAGCGCTTCGTCGTGCAAACGTCATGATTAGtacttc tctcatttgaccgaaattcaatcccacaatcatTTTCGTCCTAATTGAAA Attcgtgaaagttattactttttctttgtaattgagcgtaatttgcgtgc aagcgtaatcaacgcaaagggtgatgggattgaatttcagtcaaatgAGA CGGCATGCTATTGATTTTCGAGACTTCGTAAGATGAGGCTCAGCATTTGC TTAGCCAGTACTTACAAGATTTGAGCCTTGAtttgcttataagcgttatg ttTATAAAAGACGTGTAATCAAAATCTTCTAGCGAGTAAAACCATAGTTT TCAATTACCCTTGGAATAATAGAATTTTATTAGACTTTTTGTAGTGAAAA ATTGttcatttatttcatttaattttttctgatgaacGAAGTTTTCTTGA CGTTTGACGCGGGAAAAAATATATGTACATATTTTACTGCCATAACgcgg cggtttacgggaaagaATAGTAGCAGgtggtagagtttggaacaaactGT ACACACACATCCGCCCCGGGCTATCCCCGTTTTTAGATTTATCcccctaa actattcccttttttagtgatcttgtgtagacgataggatcgtctatgTT TGATCTTACTTCAAAGTTTAGGTAAGAAGTTGTATGCTTGTAACATTGAC TTTTTTCCTTCATAGATCGTATTTTGTTGAGATGGGAGCGAATTTTGAGC GTTTTAGTTTCACGACAAGACCGTCGGAGAAAAAGAAAGTGATTATTGGT TTTATACTGTGTCTATTTGTAATTATTTTAGCCGAAATTTATTAGAGAAG AAAATTGCActtattcaaaaaaactttttagaacattttaagtaaGGTCA CCCACCACCCcctagtttaggtataaacttatttctttttttatgatttt tgttggcgaaaacgtttagaacatcccagacttagtcaaaaattgc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008100TCONS_00008100Clytia hemisphaericatranscript
TCONS_00008101TCONS_00008101Clytia hemisphaericatranscript
TCONS_00008102TCONS_00008102Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008102-proteinTCONS_00008102-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082supercontigsc0000082:89060..100255 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.46 9.51 11.18 12.45 13.76 10.46 14.22 14.15 9.56 9.49 9.96 12.04 10.53 10.63 10.43 12.22 14.27 14.36 7.65 8.82 10.08 11.13 12.41 11 9.99 11.25 5.62 6.98 8.17 7.5