XLOC_004524 (gene) - C. hemisphaerica

Overview
NameXLOC_004524
Unique NameXLOC_004524
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000081:244392..250309-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004524 ID=XLOC_004524|Name=XLOC_004524|organism=Clytia hemisphaerica|type=gene|length=5918bp|location=Sequence derived from alignment at sc0000081:244392..250309- (Clytia hemisphaerica)
GGCAATATGGCTGCTTTGTTTACATTCGATTTCACTTTTACATTTTTTTA AAAAGACACTTTTTTGCTAAAACCGGCCACGAAGAACCGAAGAACAGCAA AAAAGTAAAGGGAAATTGACTTCATTACAATCTTCTACTACCACAGCGTA AATGAAATGAATAGTCATTTAGCTAAATGACCCTTGTATATTATTGGGAA TAGCTAAAAATCATATTGTGGCGTGAGGGTAGGGTAAATTCAATCATCAA TGAATTCTTTCTGTTTATTTCTTGCTTTACTGCTGGTTTCCATCATTAAG GAATCCTTCACCAGTAATCATGTTGTTGTGGCTACATATAATCTTTGGAA CATTATGTATCATTGGGATGTCAGAAAATTTTATATTGCTGATATGGTGA GGATATTTTTTTCTTTTTATTTATGCTGTGTTCTAATACTACATACTTCT ATGTTCTAATCTTTAGCCATATAGACCTTTTTTCCAGTCATGATACCCAT ACTGATACCACTTAAAAACATCACATAATCTTAGTATCAGAATAAAGAAC ATGAGAGGATGTGTATGGCAAAAGGTATGTCTCGATGGGTGGTGGTGGTA GTGGTCATTGACCTTCATGCTTGCTGCATAATAAAGGTGTAAGGCAACCA TCGATCATATTTCCCGCTGATTTCCTGATTCAGAGAAGCGGGAAAAAATC TGGAAAAAGCAAATTACAGCTTTTTTCTCTAGCTCTTCTCCGCAAAGCAA ACGAACACATAAACAAAACAAATAACACTGATAAATTAGATTGAAACTAC GAGGGGCAGCATTATTTTAGCTATCTTTTCGCAAGATTGGCTTTCTGACA TGATTTTCAAAAACCTAGAAAACCCTAGAAATCTTTCCACCTGTCCTCTT TATTTTTAACACAACCGGTGCAACACACACAAATCTATTTTTCAATTGTC GCTTAAGGTGACTGAGGTTCAATTCCCACTTGCACTCAAATTTTGTCTAC TAGATCAAAAGTTATGGTCTAAATGCTAAAACATTACTCTTCAGAAAAGT CGAAACCGGCCACAAAGATAATGAAGAGACTTTAATTGTTAAATACCTTT GTTTTCGCCTTTTTTAAACTTTTTTGAAAATTATTTTTTTAGCATTTAGA CCATAGCTTTTGATCTAATTGATCAAATTTGACAAATGACCCCTCAAAAT TAAAGTCTTTCCCTGCTCTTTCCAATGATAGGATTTAGGATTGATTCTTA TCAGCTGAACTGCAGTACATAGAACTCGAGGAGGTAGTCGACCTTGGCTT CTGTGCAGGCGGCCAGGGTTCGATTCCCACTCACGGCAGTTCACTTGGCA AGTGAACATTCCTTCGTCCGGGTCAACCTATGCCATATGAGGGGAATTGG GTAGTCAGTTCAAGGTGCTGAGAGGACGCTCATTAGTAAGCGTCTATAGT TGCGAGAATAGGCCTCTAAAGCCTCCTGCAACTCAACCAAATAGAAATAG AAATAGAAATAGAGGAAATTGACTTTTTTCTGGGACACTCGGTATATTGT CAATTCGGGTTAAATTTAATAGTTTGTGGCATTGAATCTTTGAATCTTGA AAGAATGGGTCGGTCCACTGATAGCATATAAAAGTGAACCTTACATCATT GCTTTACAATCTTTCTTCAACACTCTCAACATTACACCTTCATCTGTTTT TTTTTGTCTTTATATAAATTGCACACCTACACTAAATTAGATTTTTTTGG ATTTGGTATGTAGGTGACTTTATTTCACACATTTTAATGTTTTTGCACTT GCATTGATTTGTACAATAACAAATGATTCCCTCTTTGAATTATAAAGTTT TAAATTTGGTCCAACTACAGCACGCTTTCTGAGTTAAAAATTCACTAAGA AAATGAAAAAAAATATGCTAAAGGGGGCTATCAACGTGATAGTAAGTATT CTTTTTTTTTGACTGTTTTTGAATTTTAAACTTTGAAAAATGGCTTCAAA TTATAACACAGTAAGTATTCTATTCTAGTGTTTTTTCTTCTGATTTAAGA TTCGAAAAGTGAACGCTGATATTGTTGGATTCCAAGATGTCAGAGCTCAT AATTTATTAGACCGTACACAGATAGATGAACTTCAGTTTTTGCTACCACA ATATAAACATAAGTACTATTTACCTTTGGAAAATGTTGATCAAAAATATT ACCAAGATGATGGCTGGCAATGGAGGGGTGTAGGCTTTATGAGCAAGTTC AAAGTATCATCTGTTGCTTCCACAAACCTTTCAATTCCTTTATATTCAAA TGATCAGAGGCAGAGAGCTATTTTGTATTCACAATTTTATATTGAACAAG ATGAACTTGAGATCAATGTTATTTTTGTAGAACTATCATTTGATAAACAA ACACAGGTAATAATTTTGTTACTTGTCAGATTTTAAATTATATTTTGTTG TGAGCCAGATTTTAAGAATACTTAGAGTCACTGAGTCAGTGATTTACTAT TTGTCCTGCTCAGAGGCAATTTACTTGAGAGCCAAAATATTTTTATTCAT CCGCATTTTCAAAGGAAAATATTCTTTTTTATTTAGAGTAAATTCAGTTC CTGTACTTTTTAAGGAAAATTAGTTTTTATTATGATATACACGTTAAATC TTTCACTACTAGCCAAAGCGGGGTATTTCCATAGAAAACATTAAATCATG GATATCATGAATTTGTAAGCTTATTTTCTATTTCTTAGTGTTCCAATGCA TATGAAGTTGTGAAGTATATTTACAGTGTTGGTGTAGAAAGTTTGGTAGT GATGGGTGATTTTCATGTTTATGAAGAATTCAACATCCCTTTGAAAGCAA TTGCAAACGGATATTTTGACGAGGTAAGTATAACAATACAATGCAATAAA AAAAGATAAAATGGGCTATTCCAGAAATAGGCTGTGCCCCTATGTTGAGG AGGTTTGACGTCCAGAGTTATCTGGAAAACAAAAAATCTAGGGGTCTGGT TTTTCAAATGTAAGAATCCAGTAAAATGAGGTTGAAAATAAAGGGTGGAC AGTAAAACGAGATCGAAAATCCAGGGTGGGCCAATGAGAAAAAAATCAAG GGGGTCATGAAATTGAAAGAAAAAACCAGCGGTCATCTTTCCCAAAGAAA ACCTCCTCAATATAGAGGTTAAATACACATTTTTATTATAAAAACATCCA AAACTTTTGAAGCCTTAGGATGTTCTTAACTTTTTGAGTTTTAAGCATCG TGTGCATTTTTCTCCATGTTCCAAAGAAATTAGTTTTTTTGGAGTCCAAA AAAACCTTAAAAATGTTATTAAATTGGCCACTGAAGCCTTATGTTCTAAT AGTTTGTTCTTAAAGAAGAAAAGTGTATTTCAAATATTGTCATTGACAAA CAAGACAAAACAGTGTCTAGAGAGGATTCTTTATATATTTTTAAATGTTA TTTTTGTAGGACAATCAATACTGTAAAAACATAGGGAGTATTTTCAACCA ACAACAATACCGTTCACACGATTATAAGTTCACTGATGCATGGGTGCACA GGTTCTCACTCTACCCTGGGTTCACTTATAGCAATTTGGTAAGTTTTTTA TCATCGCATAAGGCTATATTCGCACGCCCCCCCCCCAAGAATTGACGTAA AACTTGAATTAAAAACAAAAAGAATGGCTTCGGAGCGAAACGAAACCGTC ACGTGCGAACGTGATCTAAATTGAACATCCTCTGGTAAGCATAAGAAATA TGACTACAATATCTTTCAAGTGAAACATTCTAGTGCCAAAGCCCAACTGG GACCCATGTAAGAATGGTCGGCAAAATTATCAATCGAAAGAAATCATCTG ATACACTTCTCTTTTAATGTGTTTGTTATATTGAAGATTGAAGTTCCTGA TTAATATAGCTATGATGTCTACAATATCTTTTAAGTCAAAGTCTCACTGG GATTCGTGTAAGAATAGTCGGCAGAATAATAGATCATCAGATTCAGCTCT CTTCTAGTCTTTCACTTAGATAATTCTACCAGGCGATCTAAAAAATATCT AACAGGCTTAGGGGGGGGGGTCTCTAGCAGTATAGATACCCCTTTGATGG AATCAATCTTGAATTTTAACTTGTCTTTGTTTATAATTACTATATGTTTC AGCCTTCAACTGGGTTCCTTTCTCGTCCAGATCGAATTCTGGTCTCCAAA GTTGGAATAAAAATCGAATCAGCAATGGTACTTGGTAAAGGTGAACTTTA CGAACATAAACGTGGAAGTGAAATTTATTGGAATCGTTATTGGACCGTGT TAAATGCCGCCCATAATCGTGATTTCGGTAGAGAGCAAAACAGCACGTGT TTAACTGATTGTGGACCCCATACCTCTTGCAGGTATGTACGGGATACTTC AAATTCATTGTTTTCGGTAGTGGAGAGTTAAGGGTTCCATATTCTTTCAT TATTATCAAGCAAACTATAAATGTTGTTGAACAAATAGACGGACCTTCCC NCCATATTCTTTCATTACTATCAAGCAAACTATAAATGTTGTTGACCAAA TAGACGGACCTTCCTGCTAGTAGCATGACAGCGTTTTTTACTGTGTACAC GCATTTTTTATAAGAATAGTGTTTTTTCATTTCATAATGGATATTCTTAA CTTTTTGGGAAAAATCATTTTAAGACATTCTTCGACATTCTTATGTTAGG TTCCAACCTAGCCTAATTCTAGCAAGTAATAAATACCTCGAGCAAAGATA TGGCATTTTTATGAAAGTTTTTAGCATTGCAGGAAAACAATTGGCAATTT ACAGGTAAAATAAGGCATTCTAAGGTTCAGTTGCCATATTCCATGATGGT GTTATTCTTAGTATATTCTTAATTTTTTGGCCGATTTTATATTGAGTTTT CTTACAAAGTATATTCTTATAAAAAAGTGTGTAATTACAAAGGCTTCTCT AAACTATATAATAAAAAATGAGGGTTGCATGTACCATGTGAATTTTGGTA GTCCTTGAAAAAATATTTCGTTTTTTCACGTTATTTTTAACAGATTTTAA CTTGTTTTGTTTGTAATTGTTTATGGAAATATGCGGGCTGTTAGAATTCA CTAATTCCTTAAATCTTCATTCCTTATCATAGATGTGGAATATGTATTAA AGGAGCTGGTCGAACGTGTAAACCGAAAGAATGTATGGAGTGTACACCTT CCAAGCTATTTTTGTTCCATTTAATTATGGCTGTGTTTGGTCTAACTAGT TTTTATTTCTTCGGTATTATCATCGTGGTTATTCTAAGTCTGGTAAGACC AAGATGGAATCGCTTCTTCTTTAACAAACTAAAACTACGACGTGTAGCTA AATGTTCTTATTTTGGTGTTTCATTTTGCATAATTATATTCACGATAATT TATGCAACAATACAGTTTGATGACGTGAAGCGATTGGTTGATTTACAACC AATGGATGAGCTGAATCCTTCTAGTCATTTGATGGTGGTGGCTAAACTCG AATTGGTGTGATCGTAGATAAGATTTGGAAGTCAGTAAAAGTTTCAAAAA TAATTTACAATACAACACTTTCATGGGAAATATAGTGTCAACGACATTTA TATTTTATAAAAAACAAGTAATACAATTACTGTAGAATTAGAATTGATTT TCTAAAGATCCGATATTTCAATTGTTATGTACGTAGAATAGACTTAAAAA AATTGCTATACTTCTCAAGGCGTTCAGAATTTCGCGAACACGAACTTTTT TGAGATTTTCCGATTGCCAAAATTTTGTGCCGAGGAATTTTAAATGTTCA AACTTGCTGTTGTATTGGTATTTTGCATGACAGCTGCTATGGTTCATTGT GAGGTCAAGAAAATTGGTGTAAAATGGGGATATCACATGAATTAAGTAAA AAAGGGTACTATTTGACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008034TCONS_00008034Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008034-proteinTCONS_00008034-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000081supercontigsc0000081:244392..250309 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.08 1.45 0.92 0.96 4.04 3.05 3.42 3.31 1.33 1.31 2.85 1.69 2.49 1.95 1.96 2.87 1.97 1.69 0.37 0.17 2.35 1.98 0.99 1.55 2.37 3.06 1.62 0.92 0.48 0.5