XLOC_004447 (gene) - C. hemisphaerica

Overview
NameXLOC_004447
Unique NameXLOC_004447
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000080:508705..512932+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004447 ID=XLOC_004447|Name=XLOC_004447|organism=Clytia hemisphaerica|type=gene|length=4228bp|location=Sequence derived from alignment at sc0000080:508705..512932+ (Clytia hemisphaerica)
ACAGCTTATTCTGTAACTAGGCTTAATAAAGCATCAAGAGACGTAAGAAA AATTCTTTATATTGAAATCTTTCATAATAAAAAGTGTTCAGCCCCTACTT ATCTGTTCAAATTGTTACAAAGTCTCGTAAACATTAAGTCACTACTTATG TCAGAAATGACGAGAGATTAAATTCGCGTTACTACCATATTAGAGAAACA TTTGTGATGTTGGATGTGTATGGGAAGGTTGATAGCTGCTAATGAACTCG TGTCTTAAGTCTTGTGTATCTCATGTTGGGCTCTAACGGACCATCGATTT AAATATCTATTTTCCGATTTAGATTGAGTTAGGCTTGCTTACTTCATTTG ACGCGTATTTTAGATCGTGGGGAAACTTTAAGTTCATTTTTCCTTGAAGA TAGCGAAAAAATAACTCAATATTTTACAGCTGTACAAAGCTGTCGAaaaa tcttttatatttttcaaatcccTATTCCAAATGTAGATATgtcttttgaa ggttttttgGGAGATTATCCGCTGATATCAGtggttgttttattttttaa gataTGCGTGTTCGAAAACGTTGTGGTTTGCTAAGCTTATCCTAGGTCAA ACTCTGGAATTCCAAATATCATTACTCGAGTACTCGATATTGTTATgaaa tttctggatttttttCTGTGTTCCTTATACTGTATACAAGATAAAGGTTA TGTTCATTGCATGATTCCAAAATGCATATTTTCCCAGAGTTTCTAATACT CGaggtatttttcttttcaagaactACTCAAGGAAATCGTTGTCCTCAGG AAACATTTATATCTGTAAAAAGATAAGATCACAGTCCATCACAATATAAT TAGATCAAAATGTGACATTCTTTCGTTCGAAATAATTTGTCCGACCACCA AATTATCATACAATATACTCATAAAATCGGGTTATGAGAAAAAGTTCTCC TTATATAGTTAAAACACCTTAAAAGTTAAACATTCAACATCATTACGAGA ATGGTCAGCTTGTTTAAcggaaacaatgaaaatataggACAAAGAAAACA AACTCCTTGGACCTCACTTTAATTCCTTTAATTCCTAATTTAATCCTTGT AATTTAGATCCTAAAAGGAGGAGCTGTATTTTCCGAGGGGTTTTGACATT TGCGTTTCGATAATGGCTGCACAAGTCCATCGAGGTCAACTTTGTCTTAA AATTCCTTCATATATAGACAACTTCGACACCTTGTCCCCGTTTGATAAAA GACCTCTCAATCTGGTTCGTTCAAAAAAGCGATTCGTTGATCTGTTTAAG CCTTTTACTGGTCATTTTCCCATCTGTAGAGCGTTAAGTAGCTAATAGTT ACATTTGAAACCAACAGGTTATTAATCGAATGACATACATAGTGGTTACA AAATCAATCATAACTATCAGTTACTACATTTGGTTGTAATTATCTAACGT CATCCTTGATTTGAACGTCTTCTGAATGTCCTTTGAATGTCAGGAATGCT TATTATAGCTTTCCTCTTGTCAGAAATGATTCATTTTCTAATGATTAAAA GAAGATGGCAGGTTTTTGACAAACGTTTCCTTAATAGCTTTCACTCTGCA TTTGAAAGTGTATTTTTTGTGACATTTCCTTCAATAGTTATCCAGTTGTT AATTATTTGTCTTTCTATTTGTTATAGAAAAGAGGAGAGAGAGAAAGAAG TTGTAACTAATCAACAAGCCATAGTGTTATTTATGGGTGAGACTCGAACG ACACTGTTGGctggaaaaataaacattggaAGAGAAGGAGAATCGAGTTG TTTTGATAGAATGTTGTGTGCGTCAATACTACAACGCGTTGATGATCAGA CAGATCACAACCAGCGATTGAGTTTATCATCAACCGAACTCATGTCGCTC AGTGAAGAAATCAGTAAACTGCTTCAGCAGAAAGACGAAAATGCACAACA TGAACAGCTCATCAATGATCTTGAAAATCGAGTCGACTTGTTGAACAATA AAGTCAATACATCAAAAGAACGTCATCAATCGGAGCTTGAATATTTGAAC ATGGCTTTAGAAAATCGTACGGATGAGTTACAGCAAGTTCAAGAGAAACA TGATGAGAAGGAGGCTTCTCTTAAACAAATCAAAAGACAGTTGCAAAGAC AAGAAACGGAGATTGATCAGAAAGATACCACTATCAAACATTACGAGAAA GAGATTGTAGAGTTCAAAGAAGAAGTGGAGCGCTTGAATCGTagattgaa aacattgaaaggtgaaaaagaaaaacatactaAAGGAATTGAGATCGAAG AAAAACAGAATCGCATCGTGAAGTTTAATGATGATGTCGCTGTAAAGGTG TTTGAGGTCGAGGACCACACTGAAGCACTTCAGAAAGATATGAGTCGGTT GCAGAAGGAAAACGAGAAATTGAAACGTAAATTAGATGAGTTGAAATGGC AAATGAAAGCTAAGGATATTATGATTAGCAATGGTGAAGATACTATGCAA GCTCTTGAGAATCAAGCGGAGGAGATCGAGATGCTCCAAGACCGTGTGGA AGAGTTGGAGGAGAAATTGAGGTTGCAGAGCTCTGGTGAACAACCTATTG ATAATCCAGAGGTTGATATCTTGAAGATGAAAGTGAGAGAGGTTGAGATG AAACTGAAACAAAGAGATGAAACGATCCGCTCAATGAAGGAGAGCAAGAA GACTGAGGAGAGCGCAGTGTTTGTCGAAGAACGAATCGTAGAAAAGGTTA TGGCATCTGAACCAAAAATGATAATCGAAGAACGAGTCGTTGAGAAAGTT GTGGTGAAAACAGAATCGCTAGCACCTCAGGAACCAGTTGTTGTTGTAGA GCCCAACCCAAGAGAAGAGGAGTACCTGAAAATGTTGATCACACTTCGCG ATACTTTCTACAGCGAATTACAATTGAAACCACAACAGCATGTACAAAAT GGAAAGGGTCATTTTGAAGTCGTTTTCGAGGATCTACAGACTGTATTAGG ATCCATACGACAGAAAGTGAGCAAGGTTCTTGAAGAAAGTGTGGTGGAAA ACAATAAAGAAATTCAACGTGTGCAATcattgaaaaaacaaaacacttCC TTGAAAGAGGAGATTCAAACCAAAACTGAAAACTATAATAACACCGTCAA ATcacttgaaatcaaaaatgaagctTTATCGAATTCGGCCAGCATACAGC AACAGTTTAATGACGAACTGAGTGAAAAATGTACGGTAGCCGAGAAAGAA AGAGATGACATAAATGACAGAATGAAAGAATTATCACTGAAAATGTTGGT AAGAGATTCAGAAGTGGAccgtttgaaaaatattcttgatgatttgaaga aaagtaaaaaattgaagaaattgatgaaaaaagacaaaaagaaatcCAAT TCGTTGAGTAATTTATTGAAAGCATAATGATGATGTTGATAAGAATAATA ATGCTGTGAATGTGACTGAAACTTTCAGTTTTGTCTTGTGAATAATTTTG AGGAAATATTAACTTAGATTttgtttgaagaatttttttttgttttgttg aataAGAGGTAATTTAACCCTATTTAAAGTCGAAAACGTTTTGACAAATC TTCTTTTCTCTTTAACCGATTAGGATGAAgagttatttttgttttatgcA ACTTTCCTGAAAATTCCTAGCCCTCAATTTCCCTTTCCTGAGATTGAGTA ATATTGTCATAACTACGACACCAGAACTAACAGAATGCTTTTGAATAAGC TGCAGATCCTGTGTTTTTCACCTGCTCAAAATTCTTGTTGGATACTGTAT CAAAACTATTCGAAAGAAGGAAATTGTGAAAGGAAATTCTAATAGCTTTA ACATATCTTATTTTGAAACACTAGTAGAATATGTGCTAATTATTTTTAGT ACGAATAAATTCTTTGCCCCGATTTTAAAATCCTAAGCTCTTTTCAGCCA AAGGGTTTGTCATAATCTTGTTAAATAAGAAGGAATTAAGACTTTTTCTT ATATAAGGTTAAATGTTCAATACTCTAAGCTAGGACATTTTACTGTAATC TTTTTTTCCATGTTTAGACTAATCAGATGATGGGTCATGtttcgtttgtt tttgtttagttTACATTCTTGTTATTGATGTGTATAGTTGTAACTTGTTC TAGATGTCATATAATCATTCTTTATATAATACCATCTTATTATAAACAGT AATATAATTCTTCATGTGTACCATTAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007843TCONS_00007843Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007843-proteinTCONS_00007843-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080supercontigsc0000080:508705..512932 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12 0.07 0.07 0.05 0.2 0.21 5.93 7.02 10.02 12.29 6.48 11.9 17.3 14.68 15.29 12.58 16.63 7.87 6.55 5.28 12.27 11.37 5.89 6.22 6.93 6.79 30.1 18.1 0.45 0.4