XLOC_004295 (gene) - C. hemisphaerica

Overview
NameXLOC_004295
Unique NameXLOC_004295
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000078:200366..209053-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004295 ID=XLOC_004295|Name=XLOC_004295|organism=Clytia hemisphaerica|type=gene|length=8688bp|location=Sequence derived from alignment at sc0000078:200366..209053- (Clytia hemisphaerica)
GAACGAAAGTGACAATTAGACTCCTGTTAAGCAACTAGTAGGGTAATATA ATGAATCCTAATATTTTATTTATAAATTCTCTATGTTTTCCCATTTTTTC AAAGTTTTTATATAAAAGTTTTTTTTTCAAAACAAAGGTTTAGTTTTTCA CTTCTTTCTATTTTTTGCTCATAATTTCTTCCTTTTTTCATGAAATGCCA TATGTGCTTTGCAAAATCCGAAAATGGGTGTAGTTGAAAAAATACTGTTA AAATTTGAAGAAATAAGAGAGAAATATTTCAAGGAGCCAAGTTTTTTGAC TCTGACAAAATTTTTTATCTCATTGCTAAAATAAAAACATTCTGCTTTGG TCTGATTGGTTTGTTATATAAGACTTCAGATGATTTGGGGTCTGATGCGT TTGTAACCTAAGAGAAGAGACTTTAAATTTGAAAATATTCTGTACAAAAC ATATAGGTTGAAATTGCGTGATTGTTGATAAGTCTTTTGAAGAACTTTCA AGTCGAACTTAGGGTAGTAAATAAGTTCTTAAATTTAAAATATTTGTTTC CTTTATCGTGTAGCGATTAAAAATGGCTGGCAAACAGATTCGAAGAGAAC ATGGCACGGCAGCTATGATAATGGGTTTGATTGAAATCCTTTGCGGAGCC ATTGTGGTTGTGTTAAGCTTCGTGGTGGGTGGAAAAGGAGACCTCAGTGC AACACTAAAACCTTACTGGGCTGGCATAGTGGTAAGTATCACAACGAACG AAAAGAGCAACAGTGGAATTAAATCATTAAGCTAGAGTGTACTTCTGACT GAACTTCCCTTTCTGATTATCTTAATAACAAAATACGCGTCCAGTGAAGT CTCAGCGCCATCCAGTCAATCAAAAAGACATAAGTGGCCCCTGGGCTACA TTGGAATCAAATAAAGGATTTACAAAAAACGGACGAACGTAAAATAAGGA AACTTACAAACATTTTTGAATAACCATAAAAGGAGAAATACAGGCAGGCA GATAGACGGACAGACCGATAGGTAGATATAGAAAATTAAAATAAAAACTG GGTAAATACTGTAAACAGATGTCTGGCAAATCATATTTGGATTATACCGA AGTTCAATTAGAATAGATCAACAGATTCCGATTCTCTCGAAGTATAAGTT CTTTGAAGTTACAGGCACGACGGAAGCTTTTTATATCTAGTACGGTGAAT GAGGAAATTTAAGTGATTTTATAGCGATTTTACCGACGAAGAGGGAGATT TCGCGTTTTTTTTGTGAAAATCTGGTACGGTGGCCGCCTTACTTGCCGTA CCCGTTGCGTCGTACCTGAGTTATGCAGCGAAGGTATAAGTCAGTGTTTT TTACACTTTTGGCAAAAACGTGAAAATTTGGGCACTTTTTTAAAACCAAA TTTTAGAGAGCAAGTTTTCGTTCATTATCAAATTTAGTGNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNAAAACGTATAGAACAGCCATTTCAACGCT CTTGGAGCTTGAATGGGGTGTCAATTTCTATCCTTTTGTATTTTCGGCAT CAAATTAATTAATGGCAAATTTTTCGCTGAAATTTATTTAAGAAGCTTTA TATTTGATCATCAGATCATTATTTTGTCAAAATAAGTCATTTTAACAATG TAAGGACAATAGAATAATTGATGAGATCGATATCTCTAAAACTGCCCTTC CCAGCTTTTGCCTACTGACAATTTCTATCTATTTATACTAAAGGCATCTC ATTCAGCATGATTAAAATATTTGGTGTAATAAAGTTAACAGGCATCACAC TTAATTGCCCTGTCAATATTTTTGTCAAAAAGTGTCACTTTGTCTAGAAA ATGACTGGTAACGTTAAAGGTCACTTTTAGTATTCTAAGCTACAGTAATT TTTTCAGCCACGTGCTCAGTGGTTCATTTGAAAGCCACACCAGGACTCGA TTTGGATGTTCTCTACGGTGGAGAGAGNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTGATTGAAGT TTTCCGACGCGCCGCTTAAAATAAGCAAAAATGGTGATTCCTTTTTAGCA TTAGCTAAACTTATATTTTGGTGTGACCGCGCTCTAACAAACTGGGAATA GTCCGAAGAAGCTCAAAGAGGTTACTATGGCCATGGAAGTATAAAGAAAC AGGAGAAGTATGCTATTGTAACCAAGCTCGCCCTACGATTNNTTCATCAA ATGAGAAGATTTTTCGATCAATGTTTTCCTTAAGGTGAACTCTATTGCTT GATACTTTCCTCCAAAATTCTCCAGCGACTTTATGTCTACACATTGAGTC TGAAATAGTGTGTGCTTATAAAGAACTTTTCATTTTCTGGCTTGAGAAAC TATCTTTTCAAAACAAAATTGAACGGATAACGAAATGGAACTTAAACTTG TTTCGTGGACGAAGTTTTATTTAATTTTCGTATATTAAAAGGCTAGAATC TTCAATACTGATCATTAGAATATTAAGAGCAAACTTGAGTTCTACTAAAA AGTCTTATTTCATCGGGCGAGCTTAGAATTTCTTTTGATACATTTTATAA AAGAAATCAAAAGACTTTAACGACCAATTACCGACACATTCAACTCCTGT TTTTCTTTATACCCCGGGGGGGGGCACTCGATCTGAAATCGACCATACGT TCGGCCCAAAATTTGGCTTCTAAAATAGGACCCTTACAGTGCAGTGAATT TCCATGAAAAATCATACCCTTACAGTGCACTTTTTCAAAATTTCTCGCCC GTTAGGGCGAAAATTTTTGCAATTTTCCAAGAAAATGTGGAGTTTTTCCT CCAAAATTGACCAATTTTGTGATAATTTTACCAAAAAATTGGCCTTTTAC CAAAATTTCCTACCCTTACAGTGCAGTTCAGTGCATTCTTGTAATTTCCT ACCCTTACAGTGCACTAGCTGAACTATGAAAAACCTACCCTTAAGGGCCG AACGTCTGGTAGGTCATTTACCTTGAGTGCCCCCCCCGGGCTTTATACCT CTATGCTATGGCTAGGTTTTTCTGATATTTCTTGTTGGAATATTGNAAAT TATAATTCGCAACTTATTGGAAGTTTTCATCCCAAAATACTCAAGAATCG TGATTTTAGACTGAAAAAACCGTTTTTGACGAAAATTAATTTTCACGTTT TTGCCAAAAGTGTAAAAAACACTGACATAAAATCATAATTCATTTTTGTT TATTTCATAGTTTGTGGTGCCCGGATTCGTCGGTTTGATAGTTGGGCTAA CCAAAAACCATTGCTCTGTAAGTATCTTCATAGCAGAGGGATAGACCTCG AATGGTGTCAAATCAATATTGTATTGTATTCATTATTGTTTTAATCAAAG ATTATTCTAACATTCGAACAATGTGAATTCGAGTCTTATCCCTTATTAAC CTGAAGAAACTATAATGTATGTAATTTGGTCCTCAGCTCGAACAACTTTT CTGGTCCCTTAAGCTAAAAAACCATTCTTAGCAATTCTCTACAACTCGAA TTTGGGCGTTTAAAAGAAGGGGGCGTTTATTAGATAATTCATAACCAAGT TCACGGAACCGACAGCAGATTCTCTTTCAAGTTAACTAGGCTACTTTCAA GGGTGGTTTCTACATGCAATGGCTATGTGTATTTTTGAGCAAATTCTAGG ATCTTTTGAATTTATAGCCTTTTATTCATTGTTGTTAAAAAACCATAAAC TAATTTATCATCTGTTTATGACGTACTACATGTTACGTCATGTTTTCCTG TTTTTCAAGCCCACTATAATTGAAATCGAGTAAAAGACTTTTAAAACGTT GGTTTAAATCTCAGATGACGCAATCTTTTATGCTAAATAAACCAATAAGC TGGGTATTTACTATCACTGAATCTAAAAGATGAAAACTTGGCATACTCCA GACCTTTCACGTCTTTCATAAAAACAAAGTTGGTAAAACCTGGTCCGCAG TAGCAGGCAGTAGCGTGGTTGCAGGGGGGGGGGACAGTGCCCCCCATCAG ACGATTTTTTTGGATGGCGCCGAAATACAAAGGGCGCAAAAAGACGCCTC CGATTACTAATTTCGGCGCCCCTTTGCTCTTTTACACCTTAGATATGGCC TTAGTCCACCTACCACGCTACTGCTGGTCTGGAATCTTTCACTAACATAC ACTGACTTTCAATATTTTGCAAAAAAAAGTGATTAGTAAACTTTATTTAG AAATTGACAAGAAATGGCCCCAAAGAAGGCACTTTCAGCCCCTCAAAATT CAAATAGATTTCTCGTTGCCAATTCGACCGTCGCCGGAGGCCCTGTTTGT TCAATAACTGTCACTGAGGCTGTGTGAAATATGCGGAAACATAATATGAT CACGAGCTTAGTAAAATCATCAATCACTTGGATTAATCTGATGGTTAGCT GTGTCGGAAAAATTCGAAGGAAAACTTTAAAAGAAAATCGTAGTTCTATA AAGAAAAATCTTTTGAGCACTGAAAACGCTTTAATGCCGTATTTTAGCCT GTGATTTCGATGAAGTTTACTAGGCTTAATGATCCATCTTTCTTTCAGAT GATTGGCTTCATGGTATTGAACATCTTGGCGTTTGTCATCCAAGCCATCG CAATGGTGCTTTTAGGTCTGGTCATCCTCATTTACACTGCGGTGGCAAAA AACGTCACCAAATATTGCAAACCTCAAAATGGTGGTTGTAAATGCAACTA TGATGACGGCACACATTTTTTCGTTGGTGCCATGAAAGATTGTGAGGTCC TGGCTGACGTGACCACAATTTTAACGGTCATTCTGGCGTCCNAAGATTGT GAGGTCCTGGCTGACGTGACCACAATTTTAACGGTTATTCTGGCGTCCCT GGGTGTAGCTGCTTTGGTTGCTTTGAGTGCTTCGATACTTGGTTGCGTCT CTATCTGCTGTACGGTAAGGGTATACTTCCTATTTGATAAAACACTGTTA TGTGAACACGTGAAAGGTGTGACACAAACAAGAACCTAGACGATGCTATC ATTTTAGTGACCGTTCAAGGGAGATAGGATCATCTAAATGTGACCTAACG CCACATCCGTATTAGGTTTGAATTTTCTTGGGTTTTTGAGGCTCTCCTTC TTCTTGTTTTCAGTGAAAGAGTCTTTCAACCTTGTGCGAACTTTAACCAC CAAGTGGGTGTAGGGCAATATTTAATAAATTAACAAATTTTGTGAGAAAA TGTTTACTTTATTACACGAAAATAAGTAGCCATATGTAATTAACACAAAT TAAGAAAATTAGTGTTGATTAAAAACAGCCATGGTGGTATCCTAGAAAAA GCAAACAAAATTTGCTTTAATTTTTTCGTGTTGATTACAAGGCCGTTAAT TATGTGTTTCTATTTATTTTTGTGTACTAAAGTATCTAAATTGGAACTGG GGATTATATAAAATAAGATTTTAGCAAGCAGTGGTACGTACAAAAAACGA GTTGATCATTTTCATCCTTTTATGCAGGCTCCAACCACGACGGCAGTGAT TATGAAAGATGGTACTGATGTTCCTTTGCAACAACACCAACAACCTCCAG CATACAATGAAAGCGAATACCAAGAAAAATAAGATGGTTGCTTCATCTAT TGATTGATTGATTGATTGGTCGAATAATTCAAATTTTGACACCATAAAGC GGGGGCTGTAATTAAATATATAACTCAGCGTTCACAAAATAATAATTGAC AGAGCTTGGAAAGTCAGACACAAAATTGATAAATTTGACAAGGAAATAAA GGAAAAAGAGCAAAAAGATTTTTAACCACTTTTTGGAAAAATAAAGTTCG TCAATATTGTAAATATATTATAATATAAAGGTTTGTATTTTTAATCACTT AATATTAAACTGGTTGATAGACTTTCAGTAAGAGCCATTCCAATTTCAAT TACCTTCCAAAATTCTCCACTCAAACAATACACCATCCAGACATTAGGCC AAAAGCTAAAGAAAGGGGGTAGGTTGGTTCTCGATTCTCAACATCCAGTA ACGTTATAGAAAGTTGCCATTAGTTTCAAGATGCTTTAATTTCATTTTAT TGATAATTTTTGATATTTAATTATGGGTTCGTAAGATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007609TCONS_00007609Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007609-proteinTCONS_00007609-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:200366..209053 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.07 0 0.08 0.1 0.27 9.42 10.17 7.89 5.34 8.16 6.89 6.42 7.79 1.07 1.61 18.03 23.42 11.07 10.94 41.98 40.44 4.87 7.79 12.07 11.54 5.97 7.06 0 0.08