XLOC_004280 (gene) - C. hemisphaerica

Overview
NameXLOC_004280
Unique NameXLOC_004280
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000078:335812..341615+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004280 ID=XLOC_004280|Name=XLOC_004280|organism=Clytia hemisphaerica|type=gene|length=5804bp|location=Sequence derived from alignment at sc0000078:335812..341615+ (Clytia hemisphaerica)
acttgttgatgttgtcaaagagattcaaCAGTAGGTTAACAGTTCAGAAA
TTAATAATTCCATGTTCCGTTCACTTGttccaagttagagccgttACTTT
GGCCATTTTAcatccattttattttaagaaataaatccCACCCCAAAATA
GCCATTCTACAtgcattgcaaaaaaacatgcagacgttttcttttttaat
ggcTCAATTTTTCTGTTTGCTTTTTTGCAAAAACCCCATATTGTgctaaa
atcttgaaaaaaggcTTAAAACCCACACTTTAAATCCTGTAAAATCTGGG
TATAGGAGTTTTAGTCTAAtccaacaaagcatcttataattatcatcatc
attttcaagGTACCCAGTGGCGTAGCCAGGATTTTCAAGGGGTgtcgcaa
atttcaattttcaaatgggcGGTTAGAGGGCGGTTGTTAATTTCATCAGG
GCGGTGTTAAAATATAACGCCCaaatacttccaaacaaccgggGGACGTT
ATGGGCTGCAGATCCCAATACCTGTGAACCCCAAACACAGGCCACGTTGC
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NNNNNNNNNNNNNTCCTCTTACCAGcgctttttatttcttgtctttcaaa
aacttttgtttgtcaaaaaaggGTGTCGCTGAGTCTTCAGGAGCGACACC
CTAGTGACGCCACTGGTACCTCTGGATATGGAGAACAAAAAAATTAGGAA
TAAGTTTATTTGACCCCTGAAACCCAATATAATAAAACAAGCAAAAtcca
aattaaaaatttttttcaactaaacaaaaattttttttttggacctacct
ccgggtgccccgctggaggtcctatgaattaacctctgtctgttcgttcg
ttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgtt
cgttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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tttggcattttctcgagattttatcattagttttttctgattttttgctc
aaagatgcgtgttaacaatgcccaaatcatggccgagtccgatttttcag
aaaatgttttttccagccaaaaaagccggaaatttccgtttttgcagatt
tgcaGATTTTTTCGTTTCATGTCTTTGTTTTTTTCAAACAaaaacatcat
ttataagaatgtccacgattaagcatggttcaattttcaatgaaactgat
tttggtacaggaactttctaaaaatcgccagaacagccgagaattgctgg
attccatgaatttctcgagttgttctcgtattattctgcattttcatact
attgttctcatttttcaattgtcttattacatcaatcttcaggtaggtcc
attcagcatgtagcttgttttacAGTTGTTGACTTAATAATGGCAAACAC
AGTTGAAAATTTAattacaaagataaaaagtttaCCTGTAAAAACTCAGC
GGGGTATTTCAGCCATCATAGGCGCAACAGTTGCAGATGCAGCCACAAGA
CCATTACATTGGGTTTACAAACAACCAACCTTAGACGCCACCATCAGTGA
GTCAACCACACCTGAATTTTGGCCCGAAAGCAAAAGCCCTTTCTACACTT
TGCCACTAGGTGCAACAAGCAATTATAATGATGTTGCTGTTTCCTCTCTA
ACCTCCCTATATGAGAATGGTGGTGAGCTGAATATGAAACATCTTTGTGA
GACCTTCAAGAAGGATTTTGGACCGGGAACCATTTATGAAGAAGCATTAA
CACGTAGACCTACTGATCGATCAAAGTTACCGATGGAAGGGCATTGGCTG
CATAAAGGAGTCATTTTGTTTCTCGAGAATTATGCAACAAGAGGAGAAAT
TAAGAATCTGGGTGACTCTACTCATAATGAATCTGATGGGTTTTGTGCAG
CTCTTCCAATCATCGTCAAACATGCTGGCAGTGATGATATGTGGGAACAG
GCTTCAAAAGCAGCAATGTTGTTGAATACCAACCCTAAGATTCTCAATAT
GTTTGAGGCAGGAGCTCTTCTGATCAGCAACCATATTTTAGGTGAAGAAG
AAGCATTTAGTAAGGTCACAAATGTTGTCAAAGACAAATTACCTGATGTT
TATGAGTTAATGGTTGAAGTAGAGGAAGCTAAATCCATGCCGTTTATTAC
AACAGTTGCTCAATTTGGAAAGGCTTGTTATCTACCAGGGTCTTTTCAAG
GTGCGCTATTAGCAATGCAGCAAACATCATCCTTTGTTGATGCAGTTCGA
TTGAATATACGTGCCGGTGGTTGTAACTGTAGCCGATCAAATCTCATTGG
TGCTTGCTATGGTGCTAAATATGGTATTGATGGCATACCAATTGATTGgt
taaagaaagttaaaaatattgaGAATACCATGGAGAAAGCTATACAACTT
TTGAATGCttaaaaaattatattgcaCCAGCTAGAAACATACCCTAGTAG
TAGTAATAAATTAATGAAAGTCATAAAATAGCCCattattcattttcttt
ttctctgtATAACTCAGTTATTTATTTTCAGCGTGATTTTTTAGTCTTTT
AGTCCtttcagattttttcttttctacgtaTTTATATTCCCACGTACATC
ACTAAATATTTCCTGTACTTATTTATTTAATGTATTATTGTGTAACTTTT
TTTGACTAGTTTGTGTGGCCTGATTTGTCTGTGGTTTATCAATCATAATA
CCCTATTCAATTTATGATATACCTGTACCGTATTGTACTGTATAGCAAAG
GTTTGATACttaaaagcaaaataaataatcaatttcttcaaacaaaacat
tttaaCTTGCAAATGCTTTAATTAATCGAAATCAAAGATTGCTTTTAGGA
TTAATAACCAGTacgtaatttctttcttttgtatttGATTCAAAATTTCT
AGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007583TCONS_00007583Clytia hemisphaericatranscript
TCONS_00007584TCONS_00007584Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007583-proteinTCONS_00007583-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:335812..341615 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
125.7	130.62	132.44	138.25	104.05	81.69	73.59	78.95	50.29	39.97	30.11	28.93	15.38	13.94	25.76	28.23	50.96	45.58	11.06	13.1	23.07	24.13	54.87	49.25	18.2	18.08	26.52	15.77	28.18	26.12