XLOC_004265 (gene) - C. hemisphaerica

Overview
NameXLOC_004265
Unique NameXLOC_004265
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000078:54936..61140+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004265 ID=XLOC_004265|Name=XLOC_004265|organism=Clytia hemisphaerica|type=gene|length=6205bp|location=Sequence derived from alignment at sc0000078:54936..61140+ (Clytia hemisphaerica)
AGATGAAACAAGAAGAAGTATTGGGGTATGGAAGCACGTGGTTTTCACTT TGGTTGTGGAAGATCATGAGTGCTGATGCCTTCATGCACTACACATTGAT CGCACTCTTCTTTGGCAAAATCTGGGTAAGGTTCCTATTTTGAAGTGCTC TTGCCGAAAAGGTTTTAAAGGGTATAGATATAATTGTATTGGAGTAGTAG AAgaggggttcgattcccacttggtgctgtgattcacttggcaagtgaat aaaCCTTCGCCCAGGTCAACCAATGCCAtatgaggggaattgggtaccaN ATAGATACACCACCAGTGAAGCGCTCCAATTGGGGTTTCTATGGCTTTTT TGCTCTCATGACATATTTCATTTGGAGTGATTTGGCATTTTTCGGTGAGA TGAGTTCAGAACAGAATCACTTGAGCATGCATTTACGAAATGGGAGTGCT CTTGAAAAAAAGACAATCAAGTTACGTATGCAAGANGAACCTTCGCCCAG GTCAACCAATGCCAtatgaggggaattgggtaccacgctctgatacaaga gtatggggagaTATGCCTGACTCTGTAGTGTGGTTGCTAATACTTGTCAG GTTCGACCATTCGAGGACGCACTGTCCTCCCAAGTTGTTCGAGTATACAC CATCAGCTCTGTGTGTGTTGCGAGCACGAGTTGGCAGAGTCGGTTAAGCG CAGTGATTTCCCTATCCTAGGATAGTAGGAAATTACTTTCTTTTCCTCAT AGGATGTAATTGTGATCAGATTTTGATACCTTTAGACCTTAAATAGCCAA CCTTGACGCTTAATTTTGAGAATGTTTCATGACAACAcatgtcatttttt aaatccAAATAGATCTGTCATACTGTCATCGCCTTTATATCCTGGGAATT TAACTTTACATAAAGCTTATCTCCTTCCTTTGAAAGTTCccaaattttgc gaaaaaaatcACGTCCAGGTATAGCTTCTTAGTCTCGAATTCCAGATCAC TATTCTTTTAACACAAAACGTAGGAGCAATCCTGCctcaaagtcaaaaag aagaaaaaaagccgTTCGGGAAGTTGGAATAGTTAATTCAAACActcgaa aagtaaacaaacttctAGGTAGGTTTTTTCTACTACTGTAAAAGAAGCTT TTGAGTAAATCTGATGTGAATTAGTAGTCTAGACTTTTTCAAATATATAG TCTGATAAAagaattttaaacaaattaaCTAAACGGTTCCcctcgtcgca aacgccggtttagcttTAATTGgaattttaaatataaaataaaaaccaca aCGTATCATCAACTACTTTTTCGAGAAAACAGTAAGATTTTTTGTCTTAA AACTGCACTAAATCCTTCTTTCATACTCGAATCAACTcctggcaaaattt gagaagtAGCAGCTCAGCTACCATCTTGCGTTACACACATTTTTCGTAAA CTcctttagtatagtaagatttttaaaaacatagtACATACAAAGGCATA CATAAAGTTTTCTTGAAAACATTAAGATTTATATCAGGAAGAAATCATCC CGTTGCTCGATACAATTTTCGAAAGTTAAATTTGTGAAGGTCAAATAGAT TAACGTTTCCATGCCAACTGGAAATTTGTTTTCTCTTGTTCAAAAATGAA AGGCgcttatttgaaaatattcgcCCTCGTCAGTGTAGGCCTTCCTTAAC CTAAAAAGCAGTCAGTTTGTCATTGTTTTTCTTCCAGGTTCGACTATTCT TTCCCAACATTTATGAATCTTAATCATCATTTTTCATATGTTGTTTtcga tgaaaataattatttcacaATGTCTCATTCTGTATATTCCAAAGGAAATA TTTCTCTGGAACCTTAAAGCAATCCTCTGATGACGTCCAAATATTGACCC GTTAATCAAGTTAATTTATGATGTCCCATTGCTTTGCTCTTAGTTTGAGG ATTCTGATACTATTATTCAGTGCACCTTCAGTTTGGCTATGTACCGATAT ATTATAGAGATTTGTAGCATAAAATTTGCATAAAGCTCTTATTTTAAGGT GTGACTAAATCCATTCTCAAACTCTTGCTTTGTTTGGCTTATTCATAAAA GAGTTTTTTTTCCGGTATCTTGGAAAACAGAGCAGGCTGGAGGGTCCAcg ccatgaaattgaaagtgggggCCAATGAATATAGatactaaggaggcgca accaaaaaattttactttgcaAAGAAGTTGGGGGCATGGCCCCCTGGCCC CCCGGTGGCGTGGGCCCTGGGCTGATAATTCGTAAACAATAACACCTCCA GCGTTTCTGATAATGTTAGCATCAAGTGTAGACTTTTATATCTTTTTCTT CAGGCCTGGTTGAGGTTCAATCTGTACTTTACCATTCCTAACGTCATTAT TGTGTCCATGATTTGTCAAATCCACCTCATGCAGGTAAGAAAACTAtcta ttgggccattccattttatgtcCATACAGAgaggtggacgaacatttcca gggggtaatcggaaaagaatttttcagggTGTCTAAATGAGTAATTTTTA ATTCTTCCAGGAGGTAAaactttattctaaaatttccaggggtaaaagac tcattttagttcgtccaaccttacttttaaggtatgaaaagattTCTCCC AAGgcttcttttgcaaattttgccattttccagggggtatctacacattt ctaagaatctttttttaatggaacagcccatttatTCGTATGGTTTACAA AGGGTGAAACAGGGTAAGGTGTTCTAAGTTTTGAATAAGCTGTCGCGAAA TATAATACATTTTCATTGACTCATTTGACACTGTAAAGTTCCACCCCCTT GGACGGCTAGCCACAGGGATTGCTAAAAGGACAAGTTGGAAGTACTGTAT TTTAGCCTTGGGCAAGTAGGGATCTATTGATGTAAATGGTcagctttttc ttttaaaattcatcTTACTGATAAATCCTCATCAAGtgaattcttttaaa attcatcTTACTGATAAATCCTCATCAAGTGAATAAGGAGGTACATACGA AAGACGGACATTTTTTCGAATTCCGGGTCCTGTATATATACAGGCAGCCT TTGTTGACGCAACTTTTGAAAATCTGAAAGATGACCAAAACCTACTTTTC TCGTGAAAGTCCCCCTATAAAACCCTGCTTTTTTAAAGGCGTTTGGTGTT ACTTATCGTTAAGCGAAACCGCTCCTGTGAATTTTGAGTAGTTTCAGATG CGAATCAGTGATAATGCGAGTCTATTTCGAGGTAAATAAATGGTTTTCCG GACTTATCTATAAAATAGTACGAAAATCCGTTTGCTTTACGTCAGCGTCG TTACCGAGTGCGTTAAGACACACACTTTTCAATGGAAGTCTGCACGCCAT ACTCGAAATACTTTATAAGCGGATGTCTACGAACGAAGCCAAAATGGCTA GAAGCGAATATTTCTCCTTTCTCCTTTTAGAATATACGCCGTATTTTTTA CGACGGATTGAATTCagcggtttctttgttttcgagtggtatatttttta aatctagcaataaaatttacttttaatCTTGAATTCGTATAAAAACGACG TGGGCTGCTCAAGACCGCGCAACTTAGAGATTCGCTTCCAGCCCTACGGG CTTTTACTTGTTGGTGTCTACTACCACAGACTTGTAGACCTCGTCTGTTG ttttattgatttgtcttttcTATCCTTTCATTTATTCATTAACTTTTAAT ATAACATAGCATTTCACATATTTCTcttcaaatattaaaaacaaacatta cACTGTGTTTCACGCGCAAGGCGATCATCAGGATGTGGAGTACATAGCAT aaaataacaatagggagacactgtcctgatatgaaatatgtgtctgatat gaaacgggaacttTTATGTAAttaaataaaacctttaagtgaAAAAACCT CAGAACACTGTTCACTTCATAGCTTGGTTTACACTAGCGAAAGGACTTTT CATCCCTCCTCTTTGGGAAAGAATAAATGTTAGAAGGTGATTAAAGTCGC TCAAACATTTCCATTCTCAAACTGTTTATCTTTCGTTATTATTGTGCGGT tcagaaaaaataaactttcattTCTTTTCTAAACAGTGGACGGGGTAAAA CTTCCCTTTGAGACGTTAATCCACGGGACTTTTAGTGGTCATACAGAAAG ATTAAACCATTCATGATCGGCTTATTATTTGATGAGATCCAATCTCTTAA AAAGACCTCTTTATACAATGTATTTTATCATGTTTTGACTTCTAACTATG CATTTATCTATCTGAAGCCCTTTAGctctttcccagctggcacacaacgt tttttcgacgtttatctaacgttcataacgtccatataacgttagatgaa cgttaaaacaacgttatgtgccggTTGGGATTGTGTTTTACAGTTTTACA GGGTTTTATGACATTGCTTTATTAAGCCAATATAAGAATAGGTGTACTTT ATCCATTATTTGGCTTGATCGATCAGGGAgtagacgaaccttttcaatTC AAGCCAAGAGAAAATTCTTGAAGACCCGTGGATAGCCCCTGGAAACTAGG CAAAATTTCCGAAATACTAGGAAAAATGCTTCCTCATTTACTTTCTCATA CCTTGAAATGAGGGTGGACAAACTTAAATCAGTCCTTCATCCCCTGGAAG TTTTAGAATAACTCTTAACCCGCTGGCACTTCTTATCGGATTACCCTCGG AGTTGAGAAATGGTCATAAAATTCCTTGTTTTAAATGGGCTAGCATTTCC AATTTTGTTGACATTCTTAGTGGGAATgagagctcagaataattttcCAA TGGATTTTAAGAGTATTTTTCTGACTGATTATTGGGCGTTCTGACGGACT ATTTGGGCGTTTTTTTCAGTGGATTAGGGTCTCGCCGGGTCAGTGATATA ACATGTTCAGTAGGAATGTCTGAAGACCAGGAACTGCTATTTTGGTCTCT TTTTATTCCAGAGGGTACATTGGTGTGTTATttcatttctgattttttat gtAGGACATCAATGACGATATTcattcgttttttttattttcagatgcGT TATCTACTTGGTGTATCTCACTAAAAAATCAATGATGCAAAATCCTTTCA CCACATCTCATCGTCCACGAATcaaatcatgacgtcatcatttccAGAAC CTCATCGTGATGTCATATTTGTATTCGAGGCAAGATGCAAAAGAATTCCG TGTACATATACCGAAATGATGTTTGATGTTGATTAACGACAATTAATAAT TGGATGCTgctaaaaataataaagaacAGATGAAAAGCAAATATCTACAT TGTTGCTGTCATGTGTCGCCATAGCTGTCTATAACGACCATTATCCATAC ACTATTATATTATCTTCATTAGCCTCAATACGATTCTAATTAAATGATTA CTCATCTAGCCTACGTAATCTTACGACAAACTTGAGTCATTTATTGTCAT TTCAAATTCTATCTATGCGTTTCTACTAAAATTGGTGTGATTCTATCTTT CTTTTGTTCTCTCTTAGGGTTTTGAATTTTCTCCACAAACCATAAGGTCT AATGAGTAATTAATCTTATAAGAACTCCATCCCTTGCTCTCCTTCATCAC GATTTGAAATATTACGTCATGTCTGTGGGATTGGTTTagaattttttgaa tgttttgattttttatctctctctttttctctttcgTGATAAATTGAAGG TGATTTATCAAGCCAAAATCTGAAATAACTTTGGATAATGTGTTACGAAA CAGTCCCAACTTAACACTCCCTTCTCTTTTATACCAACATTTTTCATGCA AATTCGGATTCAATGAGGGTACATAATTGGAGGGTTAATACGAGCGTTGT ATTCACTCTGACTTACACATTTTCATCCACaataatttttatcaattttt cccgattatattttttctctcaCTTGTATGTGTTTTGTAGTATTAAACAT ATTTTTAATTGTATTAAACTTGAAGTATAGAAACGTGAAGTAAGAGAAAA TGCTTTAAATTCCAAGAGCAAAACTTAATATAACAAAAACAGAATCACTT GGCAATTATCGTCTTTTATACCTGGTCCTATTGGGCCCTCTGAAAGAGCA CAAGCAACTTTTTATTGTATCACAAAAATCcagttttaaacatttttaaa tctGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007544TCONS_00007544Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:54936..61140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.88 32.29 18.96 20.32 103.5 73.19 110.9 120.4 100.21 80.61 89.73 86.98 35.48 44.32 36.31 54.87 37.28 53.12 35.71 38.97 71.58 71.85 47.07 47.43 80.86 78.88 33.02 28.21 52.35 47.65