XLOC_004161 (gene) - C. hemisphaerica

Overview
NameXLOC_004161
Unique NameXLOC_004161
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000076:93248..96814-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004161 ID=XLOC_004161|Name=XLOC_004161|organism=Clytia hemisphaerica|type=gene|length=3567bp|location=Sequence derived from alignment at sc0000076:93248..96814- (Clytia hemisphaerica)
AGTACAGTGACTGTCTTGTGCCTTTTCGTTGTTTAGCCGTTTTGTCATAT
GATATTCCTTAATTCATTTCAAATCAGATGTCATGATGTCTTCATCGATT
CATGTGCGGAGGATTTCTGATATTTTAATTTAAAATTTTTATATCTAGAG
CACGTTTGAAACACCACACAAAAATGGCATTTGACATCAAACTTTACAAT
GTTGTTATGCTAGGAATTTGTTTTATGTTAATATTCACAGCTTTTCAGAC
AAGTGGTAATGTACAGGTAATATTGTAGTTTAATTTTTGTTCAAAATTCT
AAAATAAAAAGTTCTAGGAGACATTTCTATAATAAAAAAATAATAACGTT
TTTTTACAGTAGATAAATAATAAAGCTTTACAGGTTTGCAGGCCACGAAG
ACACATGGGCCTCTATAAACCACTCGTACTTTTTACAATAATCTTTTTGA
AATAGAGTTTTTTTCGCGGGCTCCCCCGGACTTTCCATTTAGTGTTGTCC
CCTTTGATTTTAGCATTCATTTTTTCGGCTTCCTTACACTGCCATTATTC
TTTGATTATTTGTCTTTCATTTTTGGTCAAATCCTCTGTCACTCGGTAAG
GAAAGCCTTTTGCTTTTGTTATTGCTTGCAACACTGTGTTCTTGTCCTCT
TCGTTCGTAAATGTAACTTTGATTGGTCTGTATCTCGCTTTATCTTCTCT
TTCTTTCGTAAATTTCCCGATCCGCTGCGTCTCGGTAGTCTTTATATTCT
TCAGATGGAGCCGCCAACCAATAATTTTGTCGTGGATAAATTCTTCGTCC
TTGATTTTCGTTTCTTCTTCAGACTCATCTGTCGATTCATCTATCCCATG
AAAAATTAGGTTAAGTGCTGTCGATCGAATCAGCTGCTCCTGCTGCTTTT
TTTTTTCGAATTGCATCTCCAATGTTTTTCTCGATGTGTTTGGATGTGAT
TTTAGCGTAGCCCATTGGTGGTCTTTCCTCTTCTTTCTTTTCGATGATGT
TTTCAATCTTCTTTTTAAGTGTGGTTATTCTGGTGTCGATAGTTTCTTTC
ATTTCGTTGACCATAACATTGACGTCCTGTGCTTTCAAATGGTTTATTTC
TTCGTCCTGCCTTTTCATTATANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNATCTTTTGGTGCGTTTTCTTCATTTA
TGATGCACTTTGACGGGCTGCAAAAGTCGTTTATTGATGGTGATTTTTGA
TTATTTTCCTGGATTTTTTCCGCCATCTTTGTGCAAAATAGATATTTATA
TTTATTCTTTCCTTTCAACACCTATATGTATTCACTTTCAGGAGGCAAGG
GCACTTACAGTATAGCCCTAATTCCTCATGCAAAATTTATGGGAAATACA
TATTTAACTTTGTAACCAATGCTCCACACAAAGTACTTGAGCTAAAGTCC
CAAAAAATTGGGATAAAAATCAGTTTATTGAAGTTTGCAAAAAAAAAACG
CCACATAGAAGATGTTTCAAATTCAGAATTTAGATAGAGCAGTAAAAAAT
ACAACTTTATTCATTTTATGGCAGTGGTCAACCTTTTCTTATTTTTGACA
ATTCTCAAGAAGGTGGTGGAAATTAGAAAAATTTTCATTTCTTTGTCTAT
TTTTTAAAAATTGACAAAGAATTAAAAAATTTTCTAATTTGTAATTAATA
ATCAATTTTGCCACTTTTCATAGTGAAAATGTGAAAAATTTTAGATTTGT
TGTTCTGACATGGTCCCAAATTTATCAAACCTTCTAATCTGATATGGTCC
ACTTTTCAAACTCCAACAGCACATCCCTGTCGATCAAACTCAGTTATTCT
CTGGCAAGAAAACTTAATCGTACCGTGAGTGGTCCTAAATCCGACAGCCC
TTTCAAAAATACAAACTAAAATAAAAACAAACCTTTCGCTGTGACGCAAT
GAAGATATTAAAGTGTCAACTCAACTGAGAGATTTGATACACTGAACCAA
TTGAACCAAATAACAATAATTGCTTCTTATACAAAACATAATTTTTTATT
ACAAAATTGTTAACGTTTTAAACAGGAGCAATGGATTCAGAATAATAGAG
GTAATTATTTTTACAACTCCCACTTTTTTAAACACATTAATTGACATCTT
GACATTATAGTCATCTTGTTAGATGTTTTGTTTCAAAAGTTCTTGCAATA
GTTTATTGTTCAACTTGGAGAAGGAATGTTTGTACACATAGGATTTTTTT
CATAGCAGTTATTTGGGGGGTCGGATTTAGGCAGGGCTGTCGGATTTAGG
ACCACTCACAGTACTCAAGGGCGGCGCAAATGAATCCAACATTTGATCCA
ACATTTCAAATTCATTGTTGGACGAAATGTTGGACGAAAAGTCAGGTGGA
AAAATTCGAAAAGTTGCATGGAAAGTCATTTGCGCAAAAACGTCAAACAT
TTTCATCCAACAGCAACATGATTACGCAAATGCACCCAACATTGAAACCA
ACATAAAAGGGACGTCAATCTCAGTAAAATTGTTGCATGAAAATTTGACG
GCGATCAAACTTCATCCAACATGATTTCCAACAATTTTCTTAAAAAGTTG
CAATTTTATGACTTGTGCAAATGAACCCAACATTTGATCCAACAATGAAA
CGAATGGAAACAGTAAAAATGGTTAATGTAGCAACGTCAGTATAACCAAA
TCAGTCTTCTTATGGCTTTGAAAAAATAACAGTGGATAAAATATTTCGTA
CACAACAAATTCTTATTCGTTTCTTTCCTATCATAATGCTTTAATGTATG
ATACCGTGAGTGGTGAATATTTCAAACATATTTGTCAGTTTTTAGAATAT
CAATGAAATTGATACTGAAGATATGAGGAGTTAATTGGATAGTTATGCTA
ATTTTAAGGTTTACCTGTATTTTTTTACATGCTTGCACAAAAAAGTCAAA
AAACCTGAACTAGTGTGTGTATGATTGTAAGATTTGGTATACATGTTGCA
AATAAATCTAATAGGCTATAAATGAAACTCAGTGATATGCTCCCTGATAA
AAATAGGGTTAAGGTCTCCTTTACAACTAATTGAGAGTTTTTTTAGAAAG
TTAAAACTTTGTCAGTTCTCTGCCATATGCAAAAAATCAAGGCTAGACCT
CACTATCAATATATTGAAAGCTCAATGAGGTTATTTCATATTTCATAAAG
CTTGGTATATATACTTTATTTAAATGTCTTTCTAGAAAAATTGACATTGA
AAGGTTTCTCATTAGGTTTCCCAATATTGTATATATGTGTTTTTTCTTTT
CTTTTTTAAGACTTCAGTGTTGAACAGCTACAAAACAAGCAGTGGTGAAT
ATCCCTTTAAAAGTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007395TCONS_00007395Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076supercontigsc0000076:93248..96814 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.87	0.61	0.35	1.03	54.13	28.85	38.01	33.33	14.16	12.67	11.35	5.39	5.59	10.1	9.9	7.96	9.81	9.34	6.29	16.27	15.65	14.53	8.56	16.87	18.04	44.43	17.49	19.58	27.63	21.47