XLOC_004105 (gene) - C. hemisphaerica

Overview
NameXLOC_004105
Unique NameXLOC_004105
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000075:423000..432942-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004105 ID=XLOC_004105|Name=XLOC_004105|organism=Clytia hemisphaerica|type=gene|length=9943bp|location=Sequence derived from alignment at sc0000075:423000..432942- (Clytia hemisphaerica)
ACCTGACATTGGAAACCAACCGGAAACCAAAGGTGCAGATTCAACATCAT TTCAGGTAAGACAGACTGTTCTATTTTTTTCTTGCCACTCTCATCTCAGC CTAATCAAATTGTTCCTAAAATTGAGGTTTTGTAAGCTATTGACCACTTC ATATCAACATAACAAACACCTAAGTTAGCTAAGTTTTAAAAGCGACTTGG ACTTTGATAATTATATCAATCGTCCTCTTCCATTTTTACAGGACATTTCA ATGAGCCAATGGGATCCAGACGTTTTGAGTGAGCTACCTGAACACATACA ACAAGAATTGAAACAGCAAATGAAAATACACAAAACATTAACAACAAGCA GCGTTCCGTCCAAAATCAATACAAGTCCATCAACATCGAAGACAAGCAAA GCAAACACTAACAGTCCTTCCGCCAAATCAAGAAGTAATGCTAAAATCTA TGTTAATCAAAACCATAAAAACATCTTCAAAAAGGGTCGTGGACGGCCAA AGAAAATTGATAAGATTTTTACAGATTCGAATAAGTATGGAACTATTCTT GATACTATGAGTGCAACAAGACTTGTGAAATCGACTAAAGGTCCACAAGA AGTAGTTGAGGAAATACAAACTAACACTGCTTCACAAAGACCAGGGTTCC TATCTCCAGAAAGAGTTGACATGGATGTTTTAAATGAACTACCTGAGGAA ATTCGTAATCAGATTTGGAACGATTTGAAAAAGACGTCAGTCAATTTCAA GAAACCAAAATCAAATCATCAGCCTGTTGCCTCGTCTTTGTCAACTTTAC CGGGCAGATGTTCAACTACTTCTACCTCCACCACCATTGGAAATACTAAA AATGTTAATCAACTTCCATCTTCTTCGAGTTCTAAACATGGCCACTCTCC TGCCAAGCAGAACTCTATTCAGAAAGATACGTTCAGCTCTTCATCACTGA ATAAAGATGTCAGTAACCATTTATCCGTTGAACAGGCTTCAGGTTTAGTG AAGGCAAGCTCTACAGGGAGTTCTGCAGCTTCCCCTATAAGAATAAACAC CGGGTCAGCCACGTTGATACAGAGACAAGTTATTCCTGATATTGTGTCAC CCTCACAGCTGGATGCTTCGTTTTTAAGAGCACTTCCTGAAAAAATGAGA GCAGAAATATTGGAAGAATCGAGAAACGTCAAAAAGAAAAGACCGTCAGA TGACATTATATCTATAGGGAAAAGAACTAAAACAGTAGCTTCTTGTGATG AAAGATTACCGGATCTGGAAATCGCTGAATCAGCAGATTCCAACGACAAA CAAAAAACGTGTGTTGAGGATATGATGCTTTTATCTCCTTCAGCTATGGA TCAAAGTGTTTTAGAAGCCTTACCAAATACGATTAGAAATGAGATTTTAA ACGAATCAAAACAGCGGAAAATATCACGTGATCAATTCACTATCCAATCA AAACAACAGACAGCAAAATTAATTTCTACCGACAATAGAATAGCAAAGGA AAACATTTTCCCGATAAATGATGATTTAGAGAGGCGTGCTGAGAAGTTGA TTCAAGTTTTACCAGCTTTCCATGGAGCCAAAACGTATGAAGAAGTGAAA AGTTTGTTACGTGAATGGACCACTGAATGCGACGGTAAACCCTCTTTTGA ATTGTGTTGAATGTTGCTAAAGTTATTCCCAGGGTCCCCAACTAACAATG TGAAATTACAGTCCCTGAAATCGAACATCTATAGCTCAAATGTCTTCTTA ACTCAAACAAATTTGTGCCCCCCCCCCCGTGTTATTTTTTCGAAATTTTC ATACATTGGAGTCTCCATACATCGAACATGAACGGAAAACAAAAATGTGT TCGAGTAAAGGAAATTTCGAGTTATGGAGTAAGGTTTATAATGCATTGTT TTACTGAAGGGACCATAAAGCTTTTTCCAGTTAAGGAGACATTCGAGTTT TAGAGGTTCCAATTAAATAGACTCCACTGTATTATTACAATTGCCGGGCC GGACGGCGTTTTCAGGTGGTCAAATTGGCCGTTATCCATCTCTTCCGACC GGAGAACAAGCTTGCAAAATATCTAAGATGTGGCACCAAATATTACTTTT TGGAACTCTATAGACTAATTGTCTTTAAAATGTCTCTATATTTCGAACCT CTCTCATTCGAATCTTTAAGAAATTCAAAAAAATTATTGGTCCCTTAAAG ATCGTGGAAAGTCAATTTATGAGTAGGTGTCCATTCATTTCCTCTGTCTT CTTTTGTACAGATGTCCCTGACACAGAAGATGTTGAGGAAGTCGAACGCT ATTTCCACGAATTGTTGAACAGTTATAACATGGAAACACTATTCCTTTTA TTGAAATTCACCAAAAGGTTTGTGGATTTGCACTAATCTTTACTTACAAA GTATCCAAAGGGACCGTCCACATAGTACGTACGCACTAAGGGGGGGCCTT ATCGAAAGCGTATGCTTGCGTACAGGGGGAGGAGAGGGGTCAAAGGAAAA TGTACGTACGCAGAGAAAATTTTTTTCATAGCCCTTTTTTGCTTGTTTTT TTTGTCGAGTTTTATGCTTCTTATACGCATCAAGGAAAAGAAAAAGTTTC ATGATAAACATTGAGTTTTATGTATGAAACCAAACGATTTGAATTCGAAA TTTTCTTCAACCAAGGGGGGGATACCCATTTGCATACAGGGGGAGGGGGT ACTCGATTTTCGACATTTTAGTGCGTACGTACTATGTGGACGGCCCCAAA GTTCGATTGTAAACTTGCTGACGGAGTCTGCCAAGACCTGCCGTAAACTT AAGATGACAATCTTAGACTTGTTTTCGCCTTAAAAATTTACCATAATTTC TTGAACCCAGACATGTTGAAGAAAAAATGATTTCTCCAGCAACAAATTCA AAAAAAGAATACTATTCCATCACCTAGCAACAGTGTCATATGACGAATCT GGCTACCTGTTTGGAGACTTTCTTCCTTTAGGATAGCATGCTAGACGTAG AAAATAATCAAAAAATGTAGTTTATAATACAAACTGATGTTATCACATAA TAATTATCGTATTATCATATAACACCCATGTTACTGTATTACACGGATTA TAAACGACTCGACAGTCTATTCTTAGGCCGCTTTCACGCAACATCTTGTA TACCGTAGTACACATTTACTTATTCGATATTTTTCAGATTGTTTACGTCA AAACCTTTAAAATGGCATGAAGCTTTCAATGAACTACATTCGAAAACACA AGAGACAATCAAATTAATGTATAATGGAAAGCTACCCGTTGACCCGTTTA ATCTCGATTGATTGAGATAGGTTTTTTCAAGCTTGTACATATTTACGATT CAATTTTATATTAAAAAAACGATATTGCGGTGTGCAGTTATGTTATGAAA GGTATTATTTTTCACTGTTTAATAACTCATTTTTGTGGGTAGCCATTCCC GGGAAGGGTAGTAAAACAACAAACTAGCGAGGACAAGCATGAAAATGACG TGTGCATTCTGCGATCTATTTATAACTCTACGGACCAAAATCGGTTTGGG GACTAAACCAATTAGGCCGTAATATTGTCGTAACTTTTCTTGCATATTTC GAATTAGTAAGTTTTGGAATTAGTCGAAAGTTTTCAGAATATTTTTGAAT TTTAGTCTGCTTCATGAGTCACTAATTTCGCAAATCTTTGAAACTACGTG GTTCATTTTCGAATTCATTGTGCTTATAAAATAAATCGTATTTTAACATA TCTAGGGAGAGAGTCTCCTATTAATCAATTCCGGTAGTGTCGTAAAGAAA CTTGGAAAACTTTTTCTTATATTTTGATATGTTATTTTCTGTTTTAGCCT TTATAAAAATGGCTTGAAAAATTATAAAGTCATAAAGCTAATAAATTTGA ATATATGAGAGGATCTCCGTCCTCAATAATAATTCAGATACAAAAGCTTT AGCAATTTAAGCTTAGAATGGTAAAATTATTATTTAGATCTTCGATTTCG AATAAAAACTGAATCTAGTTTCTTGAGACAAAGATCATTGACCCCCCTCC AAGATAAACATATGAAAATCAGAGAAAAATATAATTTATACATCTGTCAG GCTGTTTTTAGATGAGTAAATTGAATGAAGAGTTAGTGGCTTGAGTCTGG AGCAGTTTTGTTTTTTCCTTGGTTAAGACAGGCATTCCAATTTTCAGCTG GGTCAGCCACATTTCTAGTCCATAATGGGAGCATTTATCTCGAAAATTGA AAGTGGTGGCTGGTTTCCATGCCTCTGTGGTGACGCAATCATCTTTTTTG TTGTCAAGACATTGGTTACACGTTTCACTGGATTGTACTCAATGGCAACA AGCTTGACAATAAGCATTTCCTCCGAGACATTGGACGGAGTAACTTGGGT ATCAAAAATATTGTAGTTTCCATCAGCTTTTCTATAGCATACTGGTGGTG TTGTGCCGGTGATGTCGGGAACTTTCAAACTGCTGACAACTAGAATGAAA GATGACATTTCTATAGATTGATGGTTGAAGGATAGTTGACTGTCAGCTGA TCAAAGGTTTATAAACAGTAGTAAAAGGGCTTTGGTGGAATTAGTTTAAA AACAATCGAAGACTTCGAAAGGAAAATGACATTGAAAGCTAATGACGTCG GTTTCTTTGTATTATGGAGAAAATATTTGACGTCAGATTTTATTTAAAAG TTTGATTAAAATTCAGCGAAAGCTATGGACAAGAAACAGTTTGAATTTTA GTTAGTTGGTTATTAGCCGCGTTTTGTTCAGTTCTTATAAGAAAATATTC TTAAGAAATGGATACCATGACATTAGCCAATATTGAGTTGCAGAAGTCGA AGCAAAATATTGCTCGCCTCTCAAAGGAAATAGAAATTTTGAAAAATAAA TGTAAATTCGCCAGCAATGATTGCTTGGTTAAAGAATCAAAGATTCGCAA ATACAAAAAGGAAAACGTGGATTTGCGCGTTAAACTTGCAAAGGAGAAGT AGGTTCTTTATTTTGTTTACTTCTTTAGCCTTTAAAATAATAAGCCTTTC ATGATTCATTGTTGTGGATGAAGAAGAAATAAGAACAAAATTCTTATTAT GACTTTCAACTTTGATCCCTATTTCGTGGTTGGTTGTTCTTATTATAATT TGGCATTTATAAATCCATTTTTTCTTCACATTTTGGAAAAATGAAAAGGA TCTAGCTTATTTAACCCAACATGTAATCTCATTATTTTTATTTAAGAGCG ATCAACGCATCCTTGAGAATTACTCCGAAGCCGTTTGTCAAATCACCTTC ACCGTAAGAATTATTCATAAAATACCTTTGCACGCATTGTTGATTGTTCC GAGTAAATAGTTTGTCATGGTTAATTTTTACTGGCGCTATACCTTCTCAT GGAAAATAAAGAGATTTTGGGTACAAGTTTTTCATTTTCAGTTTAAACAA TCTCTTTATTTTTTACAGAGTTGTCAAATCAAATGGTGCTGATGGCACAT TTAAATCACGAGACTGGCGCGTGAATGATCCTTCTCAGTAAGTTTCAACG GAAAATTTTTAGATTAATGATACGGCCCTTGGAATAACTAATAATGCAAC CTCGTTCCCTGCGTATTATCAGCTTTTTGATGCTTACTGATAGCGCTAGA TAATATTCTCTGGCGTCCATAAGTAACGTAAATAAAGCCTGGGATACACG GGGACGAGGTTGCTAATTATAATTATCGCTTAATGTTAATTCTAACAAGT TAAAAATTACCTTACAAACAATTAAACACCCATTTCTAAATTTCAACACA CCCCCAACACACATCCACATATGTTGAATTCTAACGATTGGAATTCGTTT TCTAGAAAAATCACCGTCATCCGAGAAGTTTGTGGACCAAACCAAAATCG ATTATCAACACCATTAGGTCCACAGCAGCCAAAATCCAAACCGCAAATTC CGTGAGTAAAATCTAATTTTCAATGACATAAGTTTTCTTTCTTTTTTGAA ATTTGATTTGTGTATTTTTCAGAATCTTTATTGAATCAAATATTCCCCCT ATTTCGAAACCGGAAACGCCCTGAATCAAAAATTTTTTAAAGACAGTTTT GCATGCACCACTTTAAGGGCGTTTTTTTCTATCTAAGCGTCACTGGGGAC GAATCAGCTGTTTTAAAATTGACGTAATGTCAAATAAGATAACATATACA TGGATGCATATTTGGGACAAGATGGAGTTTTTACAAGCTCTTATTTGATT TGGTTGGTCGTTAACTAGTAATAAAACAATTTTGTTACTTTTTCTATAAA GAACGCGTCATTTTTATTACTTCAAATGACCAATTATTAAAGTATCTTAT AAAAACTCCATCTCATTTGGCATATTTTGAATATCCAATGTTGCTACCTA CTTTGAACGATGCTTTAATATCATTTCTAGAAAGCCCGTACAAATGAAAG GCTACCTTTTTGTACCCGCAGAATACGTCAAATATATGCCGTAAGTCAAA CATTGATTTTTTTCTACCAAAATTGCCAATATTTTGATTACTAGTATTAT TTTAGCTCGATGGTCCAATAAAACCTTTCGAAAATGACTTACTTACTATG GACATCTTACTTGTTCGCTTCAGGGTCTAAAATATCGTAAATTTCGGTGA TTTATGATGGCAAGGCAACCATTATTTATTGAGCGCTAGCCATCTGATCT ACTCGTTATCTGAAATGAAACCGTTGGTATGATTGTTTTTTCTCTTGTAG TGGCTTTGGGTCGTCCGCACCAATTCAGGAGGTTCAAAAGGTTAAAGGCT CCCAAGACTTTCGTCTTAACAGGTTTGTAATTTTGATAAAAATTTTACGT TCAAGATAACAGGAAATGGAGAGTGTGACTAAAAAGGGTCACAAAACAAC ATTCTAGTAGTATAGGTATGTGCGAGCTATAAGGGTCCCTTCTTCACATC CTCGAAAGTCTCTCAAAGGGTACAAAAATCGAGTGAAAATCGACTAAAAA CTTGAGAAAAGTCTCTCTAAGGGTCGATTTTCCATCACCTCGCAAACCTA GTACCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNGGTCCCCCCCCCCCCGGATGAGTGTAATGGTCTCGGAATTACTTAAG ATAGAGCTCATTGGTTCAGAGTATTGAATAATTCTTTAACAGCCACAAAA AATAAAATGCATAATAATACAAGCGACGACCTCATCAGTTATTTCAGAAA AATCCTTCCCATTATTAAGGTTAAGTTGAAAATCTGGCGGGAAAACGAAT TTTTCAGTTATTCGAACTCCCGGTTATTCAAAGTAGATTCTTATCCCCCT GGAGCTTCGAATAACGGGGAGTTTACTGTAGGCGTGTCAACATATTACAG CTGTAGCATTATTTCTTAATTTTGTCTATTTAAAGATCTGACTCAAATTA TATTGGCCATAATTTGTTGCATACAAACGACAAAGTTTTTAGCATAATTT GGATGTTTTTTACCCTTTGTTTTATCGTTTTCAGTTCCCAATCTCAGGAA AAAATCAATAAAGTGGTTATTAGCCCAACGAAGAAAGGTAAGCTCATTTT AAGAAAGTCATAATAATTTGTTCGAGTGCTCTAACACCCCCTTCTCACAG ACCCACTGGGAAGCCTTACCACAGGAAAAATTGGCAAAAATATCGTCCCC AGTGGAAAATTATAAAGTCCCCAGCCATAAAAAAACATGGGAATATTAAT CCCCATCGAGTTTTGGTCCGTTACTTTTACCCCCCACTGGCTGAAAAAAC AACCGGGTCTGAGAGAAGTGGGTGTACAGTGGAACCTCTAATTAGCGGAC ACCATCGGGGAAAGGGGTTAGTGTCCGCTAATTAGAAGTGTCCGCCTTTT AGAAACTTTTGATCTCTGAGCTCCAATTTTGAAATTAGGCCATCCCAGGG TGTCGAAAATAAAAAATTGGGGTCTAAAATACTTATTTGCAGACACTAGG CCATAGAAGAACAAGAGAAACGTTATTAAAACAGAGCTCGAGTGACTGGC AAGAGGTTAAATCAAGGTGGTGGGTACGGACTTGAAGTACCAGTGATTTA TGATTTCTTTAGCCCACCTAAATTCGTTGAATGGGTTAAGGGAAAACTGG AAATTTGTAGAAATAATTTGAATAATAAGACTACTAAGTGCTTGAAATAA AAATATCTAAAAAAAACAATTTCGATTTTGGACGTCTGTGACCCGTTTGA TATTCAATGTCCGCTAATTGGAGAGCTAAAATAGGGGGTTTGGCCATTTC GTGCGAAAAAATTTGTCCGCTAATCAGAGGGTCCGCTAATCGAGTGTCCG CCTTTTAGAAACTTTTTTATGAGAATTTGACTAGGAAACGGCCGGGGAAA TGAGATTGCCCGCTAATCAGAGGTGTCTGCCTTTTAGAGTGTCCGTTAAT TAGAGGTTTTACTGTACTCTACTCTCTCGNTGTAAAATATCGTGCTATTT TTTCCATCCCCATTGAAAAAAAACTCTCTCATCTTGGCAAAAGAAACCAC ATCTTCCGTCACAATAAAAAAATCTTATCTTCGTTATTTTTTTCAGACGC GCATGTCGATACTTCTTACGAAGACCAATTGATTGACACACCTGCATTGC CCATCCCTGTGACTAAATCTAAAATTGACAGTGTTAACTGGGCAGACTTC GAGTAAGTTTTATTTTTTATTCTAACCTGATAGACACTTTATAGGACAAT CAATATAGAACTAACTTTGCTGGCTTTGATGATACAACTGAGTTGTCATA TGGGACAGTTATTTTCTAATTGTATTACTCTTTAAAGCATTTGAAGAACC TTCAACGAAATCCGTATACCGTCATTCTAAAATTCCATGAAGAATTTTTA AAATACACTGATTTTTTACGTTTGAAAAAACAATATACGGGTTGCAAAAT TATATCAATGAAAATTCACGTGATTTTATTTCCATGTTACTTGCTTTACA ACTCACAGCTGATAACTTTATTAATGTCAATAATAATGTCGAACCAATCA GAAATAAATGTCATGTACATAACAAGCACAAAAAATTTTCAAGTGAAAGC GTGATTTGTCTTCAGACTTTTTATTTTGCAACATTTAGTGTTATTTAGGA GACAGCCTCTCGGGTACTTGGGTTGGAAAATGACGGGTATGTGCGGAACA GACCAAAACCCTGATCCTTAGTGCGGCATAAGAACCAAATCTTAAGAGAG ATCTTTCGATTTTTCTTGCTTTTGCACCTCTTGAAGAAACCGAAGAACTC TAAGCACCTAAGTTCATTGAGCCGATAGCTACGAAACCTTTGCTTTTTTT CAAAGTCACCCGGTAGCTCTTTATTTTAATTTTTTTTCGAATTTCTTTTC AGATATGATGATGACCAGAAGGTGGATTACAATGAAATCCTCCAATTTTG AAATTGCTTTGCCAAAAAGAAAATTGTATATTTTGTATATTTCATTTTTT ATTTTGTAAATAGTTCTTTTTTAATTCCTTAGGTACATATTTTTTAGTTA TCTTTATAAAAAAAACAAATAAAAATTCTTAAAACCCCTTAAAATTTATG ACTTTTTCATTGTTGGACCTACACGCCGGTGGAGGTCCTATAATATTAAT TAACCGCTGTCCGTTCGTTATGAGCTTTCCGTTAGATTGGCTCATTCAAA TTTTCCGATATTTTGCACAAAGAATCAAAATGGTAAACCCTCGAATGAGA CGGAGCCCGATTTTTGACATTTTAGCCCAAAAAGGAGGTTTTTGAGATTT CCTCGAGTTTGAATCATTAAATGTTTCTGATTTTTTGACCACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007319TCONS_00007319Clytia hemisphaericatranscript
TCONS_00007318TCONS_00007318Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007318-proteinTCONS_00007318-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:423000..432942 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.98 10.53 5.17 4.29 4.77 3.11 4.83 5.28 3.27 4.33 4.85 4.03 5.04 6.34 4.49 5.86 3.73 4.3 4.25 2.55 4.14 4.44 11.56 10.16 11.82 11.17 1.47 2.73 6.21 8.79