XLOC_004079 (gene) - C. hemisphaerica

Overview
NameXLOC_004079
Unique NameXLOC_004079
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000075:479791..485981+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004079 ID=XLOC_004079|Name=XLOC_004079|organism=Clytia hemisphaerica|type=gene|length=6191bp|location=Sequence derived from alignment at sc0000075:479791..485981+ (Clytia hemisphaerica)
CTAattttttaaactatttttagCAACTACCAATAAAGCAATTAccaata aaaatcaaaatttaaaatgttgtCAACACTcagaaaaatttcttcattgA AACAAGGCTCAAAAGCTATCACTCAACAGGTAAACCtcgttttattttaa ttttaatatttCCCCTTTTTCAGCATTCTTAAATAACTTTCAAGAATTCT TattaaactgaaaatttttcctctttctcatTTTTGAATATAGGAAAGCC TTTTGCGTTACTCCAAACTCATACCAAATGTGTCAGATTTAAAATTTGAT TTACTCAAACAAATATTCAATCAGGATGAATCTTTCTCTTTTTAGGCCAC AAGATGCATGTCTGGCCTTGGCTTTGGTATGCAttatatcctaacttaaa aagATGCAAAATCTTccctttttcaaatatttgttttaaattttttcttc ctcACGGAAAGAAATCTTGAAGCTGATTAGGCAACTCAGTTTAATTTATT GAAACGATACGAATAAGTGCCCAAATCCTGAGCAATATTTGCATCGTCTT CCCTTGATATTTTTGGGTTATATATTTGTCCTTTCCAGACAAAGTTACTA TCTTCAATGTTTTATTTATACAGACTTGAATGATGAGCAAAAAGGAATTG AAGAGCTATCCCGCAAGTTTGCTCGAGAAGAAATGTTGCCAGTTGCAGCT GAACACGATAAATCTGGAGAAGTAAGGAAACATTGCCATTCTTATCAATT ACTAAATTACTGGGTGCTGAGAGTAGGTGTTTTACTATAACCCTAGTGTA AGTAGAAAAGATAGACTCCCTCGCTTCCTGCTCTGTCAGTCTCTTCTGAC AGTTACCACATGAACAAATTGCATACTTCTTTTTATAGTTCCCTTGGGAT GTCTTCAGAAAAGCTCATGACATTGGTCTATTGAATACTGGAATTCCAAC TGAATATGGTAGAGTATTTATCATTTATTATgtttatatgaaaaataaat tcagtTCATTGTTGGTATTTCAGAAGATGACAGGAAATTATATAAATCAA GAAGACTTACATTAAGATATTATTGtctgtttttctatttctgTTTTTCA TTGCCCCTCCCTCGTGCAAAAATGTTGaggttgaatttcaaattcATCTC TAGGTGGTCTTGGTGTGGACGGCGTAACAAGTTGTATTATTGAAGAAGAA TTTGCGTATGCTTGCACTGGAATGGGTACAGCTCTTGAAGGAAATGGATT AGCTGTAAGAATGAATTTTATATAAATATCAATATTGATCAATCATTCCT CTTCAAAACTCTCAATCAAGTCTATACATACCAACTATATACTTGTGTTT TCAGTGTGCTCCAGTTAACATTGCTGCTAATGATGAACAAAAGAAGGAAT ACTTTGGTCGCTTGATTGCTGAACCACTAGTAGCGGTGAGGgaagaaaag attgaaaataaacTAGTCTTTTTCTCCTATTCACTTTGGCCCTTATTGGC ATTATTTTTTGGCCTTTGGAGGATTAAGGGCCTGCCTTGAATGGGTCAGG TTTAAAAAGGcacaattttaaaaaggcccAAAATCTCAACCTTAATAAAG CGCCATTAAATTTTGACTgttttgctttgattttttaaataactatCTTT TCACTAAAGAAAATTATATATTCACCTTAAGAACTTCTCAAAAAATCGAG AAATCTATCTGTTTTCAAGCATTTACCAGCAAACGAAAAAAGTGGGAATG GTTATCTTGGATTCATAAATTTCAGATAATATTATACCATCTTTTCTTTT GTGGTGGTAGGCCTATTGTGTTACTGAACCAGGAGCAGGATCTGATGTCA GTGGCTTGAAAACCAAAGCTGAAAAGCATGGTGATGAGGTAAGTTTAACT GGAGTTTGGTTTGAAACACTTCTTATCTGAGCTAAATGGTCTTTTTATTC CAATGAATGGCTTTGACACTTCTGAATAGCATATCCATGATTTCTTGACA TTTATGCTCAAACTCCTTTAATTCCTAAAATTagtttattggacctaccc cggtggggtggaggtcctataaattaacccgtgttcgttagttagttagt tagttagttcgttcgttagttaccaacttttctcgaNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNTTATTGATAGTTACTACTAGTTGTTAATACCATTCAAAGTTT TGGCTTAATTTTTCTAGTGGGTCATAAATGGAAATAAGATGTGGATCACT GGTGCTGGAGTAGCCAATTGGTAAGCTTTTTTTTCTGTTCTTCCAACGAG AGTTTTTCTCACAGATAACAATTTTTTCTTGTGTCAATACAGTGGTTAAG AAGATTTCATGAAAAGgtgatttgatttttgatataatACCCAAAAAAGC ATTCCCATTCTCTAAGCAGATTCTGATTATTCACTATGGCTATGCAACTG GATCATGGGAGGTTTGAGGTGCCCCTATGATGGTTTTATCCAGATTTGTG ATAGATATTTAGTTGTTTATCGTTGATATTGGTGAAAATATGTGAATGAG CATGATTTAATGTCTGCCATACCTACACATTAGCAGCCAGCGtttgtttc attttcacttGAGAATTAATATAAGAAATAATTCAATatagattaaattt ttattgaatcAATATTTCACTTCTacaattttcaggttttttgtTTTGGC TCGCACTGACCCAAACCCAAAAGCTAAGACTGGTGAGGCGTTTACTGGGT TCATCGTCGAAGCTGATACACCTGGAGTTATAATCGGGCGCAAGGTAAAG GAATACTTTATTCTTACATTAATCATCTGTACTCAACATCAAGAAATAAT TAGTATACgttctgtaattgataaaacCCTTGTACTGcagcaaattggta aaataaaaaataaagctGTTCCTTATTGTGTTTTCGGCGTCTTTTATAAA TTGACCTCACTTTATACTGATAAATTACGTAAACGATGACGAGAATTTGC TTTTTTTGTTCCATTGTTTCTACATGATTATAATATATGTAGACTTCCAC CTTTCATTTTTATACTAGCTTTACAGTgattaatatttttcttttaaatg aaGGAGTGGAATATGGGTCAGCGTTGTTCTGATACTCGTGGGGTCACATT CGAAGATGTACGTTTGTCAGATAAAGTAAGTGTTTTGTTTCTATCCATCC TCGTCCTAAGTCTTAACAAGTGTCCAGTTTCTAATCACAGCACTTGAAGC TTGTATCAGCACTTGAAGCTGgtattttaattaatttaatttatcagtaa aaaatcactttatttgACGATTATTGAAAAttcattttctgaaatatttc cTCAAATAGAAGTTGGATGATGTCAAAGTGTGTTCTCTGTCAGCAGCTGA CGTTTTCTTTAAACAATGATGCATTACTGTTCTTTCTTAGAACGTTCTTG GCAAAGTTGGAGCTGGCTTCAAATATGCCATGGGTGCTTTCGATAAAACA AGACCCGGGGTCGCTTCATCAGCTGTTGGTCTCGCTCAACGTGCTTTAGA CGAAGCTGCCCAATACTCATTACAAAGAAAGACTTTTGGTACACAAATCG CAAACCACCAAGCTGTTTCATTCATGTTGGCGGAAATGGCTATTGGAATT GAACTTTCAAGGTTGATGGTTCGTAAAGCTGCATGGGACTTGGATCAGGT GTGTATGATAAATATACAGTTTTCCAGTAATTTGTACGAGCAGTGTGAGA AAGTCatcttatttttgattttggtaaAGATTTGTAGCTCAACCTACCCT CGGCCTCGTGAATAAGATACCAACCCAGAGACAAATTCATTAACATATTT TTAATTCAGGGACGAAGGAACACATACTATGCATCTATCGCTAAATCTTT TGCATCAGATATTGCTAACAAAAGTGCAACAGATTGTGTGCAGGTAATTT TAAGATTCTTTTATCAAGATTTAGTTGTGTCACTCTTAGCTTTTATTTAA ATGGCAAATAGTCTGCTTCATTGCATTACCTTGGTATTCATTTGACATCG ATAATAAATGTCTCGAAACAGAGCTTACCTTCATTTACTCTGTATCTTCC CTGTCTCTTGTTTTGATATGAAATGAAAATCATATTTTGTTTTAGATCTT CGGTGGTAACGGCTTTAATTCAGAATACCCAGCAGAAAAATTGATGAGAG ACGCCAAGATTTACCAGGTTACTACCACTAATAcatatatccaccatctt tgatcggagtttttctTAAGTTGTACCCGCAAAGAGGCCATAACAAAACT CCGATCAAATTATTTTGCTTTGCCATCATTGAAAAACTGCCTACGTGGTC TATATGAAGCTCAGTGGGTACTACTCATTCTTGCACTTCATAATGTAAAT ACAAAATTTAGGGTTTAAagtgagaaaaagatttttactaCGGAGACACC TTTACTCCgtaatctttttcttttgtcaacTTTGGTATTACTATATGATT GATCTTCTTTCTTCCTTTCTAGATCTACGAAGGAACATCACAAATCCAAA GATTGATCATCGCTCGTGAATATTTTGAACTCCTCTCCAAACGCTAAAAA CTCGAAAGTCTGTCACCctacaaaaaagaatttttcattaaaactGTAAA ATAATTCTAACACACCCACAAATTTgtcttttacttttgaaaatacCACT GAAATTTCGCACAATGTATAATTTATTAGTAGTATTTTTGGttaataatt tttattgttcttttATCTGAATCAATCTTATCTGTATTGTTTATatggat ttttaaaaattatagaaaaataaagaaaatacctttttcca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007261TCONS_00007261Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007261-proteinTCONS_00007261-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:479791..485981 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ACADMmedium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform d precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
183.58 187.14 318.05 347.45 196.17 157.8 142.29 169.44 241.41 257.1 339.62 258.2 235.9 226.23 266.23 338.58 213.68 213.11 141.58 159.35 176.94 180.26 212.61 214.75 186.04 173.13 268.97 265.41 407.38 339.35