XLOC_003933 (gene) - C. hemisphaerica

Overview
NameXLOC_003933
Unique NameXLOC_003933
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000073:321534..324937+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003933 ID=XLOC_003933|Name=XLOC_003933|organism=Clytia hemisphaerica|type=gene|length=3404bp|location=Sequence derived from alignment at sc0000073:321534..324937+ (Clytia hemisphaerica)
GGACTTCAAAGAACAGTTGGATAGCGAGAAAGACAAGTTGAAGAGTGATG
CTACCATGATCTTGAAGGAGACCATCAATGTGGATAATTTGGTGCAATCT
TCCATGCCGGAACCGGATACACCTGCTGCTCCCGAACAACCTGTCGAAGA
ggtatgtttttgttttgttgggtTATGTTCAATGTTTGACCTGTATAATT
TCATAGACTCAAAACTCTTTCTGATTACGAGTGTTTGAAATTATTATTGA
TTTTAAATATGCTTCAAGCTGCTGCATCTTGGTTGTGGTTAAATCAGCGA
TATCCAGACAAACTCTCTGCTACAATTTATCATTATTATAGTAATATTTT
ACATAGAGAacatttcttcaattttcctGATCCAAACCAATAACTCTTTC
CATTCCACAGATGCCAGCATCTTTCTTGATGACTGCACCAATGTCCGACA
ATGAGCTGGTCAACTTGTTGATGCAATCACCACTCTATCAAAAACTGCAA
AACATAAGGGACCGAATGAACGGAGTGGAGCCCAAAACATCTAAAGACCA
AAAAGAAGAAGGTGAAAATCGATTTTTAGACTACCTTTTGTCCAAAAACA
ACCCGGCTTATTAGACCATGGCTTTTTAAACGTCTTGTTTCAAGTTGCCc
agattttatttcattttcaaggaAGTCCTTGCAAGTAAAGCTGAGTTTCA
TTCTTGATTGTATCTTTCTTCTTTAGATTCATACATCGATGAGAGGGATG
ACACTTTGTTCAGTAGTGATGAGAAATTATCCCCAGTCGATCTGGATGAA
CTGAATGCTCGTGAATTTGTCATTTACAAATTCTCATGTTTCATTCGTGA
CCTCCTAGGAGTACATTGCTTCCACAAGCCTGTACATATCCTACTTGCAG
ATAAACTACCACCTAACTCCACACTGTCACATAACGCGTACAGAAACTCA
TTTTACTACGATCCGAACAATCGTCTGCTATACTTACGCCGTGATCGTTT
GGAGAACGTTGGAGAATTCATCCTGGTTTTAGTCCATACTTTATGCCACA
CCCATGTTGATGATATGCGCAGTGACTCTGATCCTAAATTCGTCAAGGAG
TTCTACAAAGCATTAAGTGTGGTCTGTTCGGACCTCTTTTTGTCGCGATA
CCGGCGTTCGAATGCCATGAACGAGGCCTTTGTCAATTTCACGGACGACC
AAAATATGTCGGTACAGGATGCCGGTAAACGAGTTTTGGAAACGGTCTTT
GGTGATACGCACGACGAAATGGAACGATCGAATGTTGTGAACGATCTTCT
AGACACCAAACTTGTTCGCAATAAACATAACACAAGTCAAAAGTTCGATC
GTGACGTCATGTTTAAACGGTTAAGGAAATACACAGATTTCATTGTCAGT
AATAAGTTACGTAATTNCAAACGGTTGAGGAAATACACAGATTTCATCGT
CAGTAATAAATTACGTAATTTCTTGGGTGATGTTGAGGAAAAACTTACGG
ATACGAAAAACCAGGGAAGTGAAAGTCAAGTcgatcaaagattgaaagag
tTGAAATTCCAGGTATGGATTGAtaatcacttttttttcttaCCTTGCTT
TCCCTCTGTATTTGTTGTATTCGAACGATTTTATGaaagatagattttga
aaagGTGCGAAAAATTGTTGATTATTCTTTCACCAATTTGTACAGCCAAT
TCCTTTACAAAATAGTATGgccattttaaactttttttctctgCTTCAAT
TAATACATCGATTTGTTCGTCACCTCATGTCATTTTTGTTTTCCAGGTCA
AAGACCAGCGTCCTGTATCCCGTTACGTACCCAGCAATAATCGTGAAATG
TCGCGTGAGATCGCCAAACAAAACACGCGTAATCTGGCGCTCGCCCGTTC
ACCGCTCGCTCTCTCGTTCGTTCCACCGCGACCCACAACTTCGCGTCCGA
AAACAGGACAGCGTCCGATGACGAGTGGTATtattgaaaatcaagaaaaa
gacTTTTATGAGACCTTCTTAGAAGCGCAAGTCGACGAACTTAAGGATAA
AATTGATGAATTAGATTTAGAGTTCACAACATTGACACGTCAATCATTAG
AACTTTCTacgcaagtgaaaaatttgGAGAGTGAAGTTGCAGGTTATGTG
GACGCTGCACGGAACAGTTCAACTCCGTCCGAAATGGAAAGAATGTCCGA
AATTGTTCGCTCGTCCAACGATAAATTATCGTCCGCGCGTTCACAATTCA
CTCAAGCTATGATCGCCAAATCTGAAAGATTAAAACGATTAGAAGCTTAC
CGCAAAGAACTTGAAGAACGAGAAAATTTGTTGAGTCAACATCAGAAAAT
GCCAGCAGCCGATCGTGAAGAAAGAGCAGACCGAAAATTAAAATCAGCAA
TggctaaaacaaaataaactttTCTTAGAGGAatctttaatttatttttt
aattattttgtaaaatttttagataaaaaggGAGAAAGACTTATTATTGA
CANtttttaattattttgtaaaaatttttagataaaaaggGAGAAAGACT
TATTATTGACGATGAAAAACAGttaatttattttgtaaaattttttaaca
atatcTTGATATGCACAATTATATGTAATTTTTAGTCACGTGGTGTACAT
AATGCTTAAAATGTTGGACCAACAAATTATGGTCCATCTCATATTATACT
TTTCctattttttgtaatatttgtGGGTTTTATGATATAGTGTGTGTAAT
GTTTGTTTATAcagaaaataacaaatttttgtattaaatATTAAGAATGT
TTTTGATTATTAATCAGGGTCTACCACCATCAGCAGACCAACTTTTTAAT
TTAGTCTACGGCTGCAATAAAAATCACTGTTCAACATTTCATGATCGTCC
TTATCTTGAATACTCTTTTCCATTATTTTGGTAGCAATATTCATCGTGTC
TTTGATTGTCTCTTccgtgtattttttatttttatccatttCAATTGCAG
ATCTGACCAATTCTCCTGCCATTTTTATCAGCGTTATCTCCTGTCTCTCT
TTTGAATCAGTAAAGTAAGCTAAATCATTTAAGAATCCGCCTTCAATTTG
AGACTCCATTTGCTCCCCTCTCTTCTTTCCATAAAACTGAACGAAAATAT
TCTTAGCACCATTAAAACGTTTAATCGGCGTGAGTTTCTTTTCATTCCTA
TATTTTTtgtcaatcaatgtttttcCAAAGCTTTCTAGAATATCGAGAGA
ACGTTTCGCGAGGCTCCATTTTATTCTGTAATTCTCGCTTGCTTCCAACC
ATTCTGGTTCGATCCCAGTCTCCATATCATTATCTTTGACGACTTTCGGT
ATCAGATCCATATCCAATTCGTCAGGTTTCTAAAAAGTATGATGATAaca
aaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007029TCONS_00007029Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007029-proteinTCONS_00007029-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:321534..324937 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.44	6.35	13.89	13.35	33.11	21.57	9.58	12.67	11.23	9.8	9.78	12.22	3.88	4.78	1.81	1.85	1.5	1.85	13.74	12.55	4.85	4.25	4.68	4.55	4.91	5.22	9.39	12.38	4.7	3.78