XLOC_003920 (gene) - C. hemisphaerica

Overview
NameXLOC_003920
Unique NameXLOC_003920
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000073:10949..21146+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003920 ID=XLOC_003920|Name=XLOC_003920|organism=Clytia hemisphaerica|type=gene|length=10198bp|location=Sequence derived from alignment at sc0000073:10949..21146+ (Clytia hemisphaerica)
ATCAggtcaatatttttttgtttcaactTTAGTGATAATAAAGAAATCCT TTAAGAATAACATGTCACAACATCTATCAAGGATAAAAAGCTGAAGGCTA TGAAGGTCTATCATCGTCAGAAGGATTGGCATGGTGTCCAAAGTATATTC TCATCTTCACTTGGCCTCACCGAACAGTTCATCTACAGGAATGCTGCCAT CAAATCAAGGACTTTCGTATCCAGGCTTTCACTAAGCAACACATTAAATT TCCACGAGGGATGTGTTAATACTGTAAATTTTAGCCATAGTGGTGACTTC ATAGCTTCTGGTAGCGATGACTTGAAGATTTGTATTTGGGACTGGAATAA TAATCACAACAATCAACCCTTGCTTGCATTTGACAGCGGACACCATGGAA ATGTATTTCAGGTATTCAATCAACCccaaatttttattcatttttatttc tgatttcttaTCAGTGCTCCAAATTCTTTCGTCTCCATGAAACCAAGATT AGCACTCATTTTTACTTAATTTGATGGATGAAGGGTTTTCTTGCTTAAAT TTAAACTTTAAAGCTCTGTTTTATTGAGTTGACTTTGTCTATAATGTGgt gtgatttttcaaaatattctttgcCTTTGCATTTTGGGCCTTGGCTTATT TTTATCACTACCAAACCAACAACAAATGAAAACATCTTAACAAGAATCAA TAATTTATTGATTGTAAACTTTTAGACAAAATTCATGGCCCACACTAATG ATACAGTTGTCGTTTCTTGTGCTCGAGATGGAGAGGTAAGAAAAAAACTT CAATCAATCACCAAAATTAATATTATTACCTTTCTTCAgataaaatattt acaaaatatcagGTTATTTCCATAATTTCTTCTCTTAGGGTATACAAATA TTTTGATTACACTTATTATGGAAAGCTTTCAAACTTTTCTGAACTGACTT AAGACATGTTTACAGAGCTGAGTTTAACAATTTTTATTATCTAATAGATT CGTGTTAGTTATCTATCAAGTGCCAAAGACAAGAATCAGATCACCAAGAA AATCTTACAACATAAAGGGTCTGCTCACAAGGTAGGCTAAATACCTTCAT AGTCATTCAATACAAGTGTAATAAATACAGCTATCACCCCCTTAAAGCGT GAGGAGACTGGGTAATAGTTTTCCAAGTGAGATGGATGTCAAACGTCTGA AGTTGTTACGTTTGTCTTCTTTCCTTCCTGGTAAAATCTTGACCTAATAC CTCTGTTTGGTTTAGGGTTGATGGACTTACTAAAATTACCATTACCATTA AAAGTACCATCATTCtgttacaaaaacaaaaacaaaatggtcaaaGTTTA ATGCATGAATAATATGTACACGAATGATTAGACTTaaataaatttgatat atttGTATTTTCGCATAGTTATCAGTGTCCAAGTCTTCCCCTCATTTACT CAAATCAGCTGGTGAAGACGGTGTAGTTTACAATATTGATCTCCGAGATA CTACCACCCCACAAAAGTAAGTTTTGCTTTTATAGACCGCAGAACAAATG TTGTGTGGTTTATAATTTATTTGTCAGTTGGCTATAATTCCATCGATGTG GAAGGAGGAATATGTATCCCTTATTTTTCTAATACGTCTGTTTATTTTCT AACTTATTTAAGGAGCGATTACCAAATGGTCAAGGGCGTCAGCGTTGAAA ACCAGAGATTTGCGGTTCAAATCCCCGTCCCTTCCAGAGTTgtgttcagt tcatagataccCGAGCcagctggccgtggaccccgcgAAAACAATTGAAA GACTGCATAAAAGTCCttgattactgggctatccacttGAAATATTGACT CTAACTTATTTTCTTTGCAGGCTATTAACAGTACGCAATACAAAAGGAGG AAAAATTGCACTATATAGTATAGACACTAACCCGTTGAACGATCATGAGT TTGCTGTGTCTGGCAGAGACCCATTTGCAAGGTGATAAGATTTGTAcgaa aaaacatattttttactGGTAGTGATTTAATTAAAGTCTTAAATGAATTT TTCTTGCAAGATTTTACCTGGAAAAAGAGACGTACATATTGTATTTTTAA GTCACTTATCAAGTAGACTGTTTTTATCAAGTTAAAACGGAAAGGTACTG GCTACTATAACCtctacaaaaatcttttttcttgcACTTTTAGGATATAT GACGAACGCATGTTATCAGAGGTATTGTAAGTTTGGAAAAACCATAAAGA ATCATGTTTTTTCAACAGCTTTATACTCAAGAGGGCCTTGAAATTCTGTT TTGATTCTAGGGTTTAATAGTTCTTCTGGCTACCCTGTTGCTAGTGTCTC TTAATCTCTGAAATAATTAGGGCTCACTTTTTTTACAGGAAAACAATGGT TTGTTGGATTCTTACTGTGCTGACCATTTAAAGGTAACATATCGAGATTT TTATTTCCTTTCTTGGTCGAATATAACTGTTTAAATATACAAATCTTTGG CGCCCGATATCTTTAGTCGCGTTAGAACGCATTATAAGAAAAGGTGGCTA AATTTTGGCCAACAAAAGAACAAGGGAAGAAACAATCTCTAGAgcgaaag attttgtttaattGTTTTGGCAATGCTTAAGTATATAGGATATTTAAACG AGCCTTTGCAAAAATATTGATCACAGTCATATTAATTCATTCATTGTTGT TGCATTTGATAAATTAATGATATGcgccactgcaatgtcttctgacactA CATCATGGAACCAAtatctgattggttgtaagtgacgtaaaatcagtcag tacgtcactttcaacgaatcagctgttgggtctgtgtaagacattacaat ggtgcatatcataaatacaGGCGCCTGTATAGCTTGTTACAACTTACAAT TTGTTTCATTTACAGGCGCCCGAGGAGAAGAATTTCAACCCACCTAATAT CACATGCTTGATGTACAATTACAATGGTACTGAACTCCTCTGCAGTTATA ACGATGAAGAAATCTACTTGTTTGATATCAAGGATAGGTAATGCTAAATG GATAATTCTATAATATTGAGTAAAACTACCCTAATTTATGTGCTTAATTA TTTTacacagataaaaaaattcactccattaagaattagtgaataaggct TCGGTCATTGTTATTCCAGATAACTAATAGAAAGGGTGTGGTGGGAATCC GACGCACTAAGAGCGGTACCTCCGCACCCACAAAGATCAAGATGATGGTG TGATGTATTCTGGAGTGGTTTGTCTATAGAGGTCATTTGTCAGCAAGAGC CCCAGTTCTTCCGCAATGGCAATGGCGAACCAACAAGCTCCTGACACAGG CGTGTCGCGAACGCCTGTGCCAATTCATCGAATACAAAAAGCGAAAACAA ATGTTGTGCAAATGATATCCCAAAATGTACGTGGTTTGAAATCAAATGAT CGTGTTGAGGAACTAACCCTATCACTCAAAAATAGAAACATTTTCGTTGC CTGTCTACAGGAAACCTGGAGAACTGGAAAAGAGGCTATCGATTGTAACA ATTATAAACTTATCCTTTCCGGAAAGGAGCGACAGCTTAACAACAGAAGT TCCGAAGGTGTCGGTATTGTTCTATCCACAAAAGCTGTTGATTGCTGGAA AGCAGCTGGATGTGAGATCCATCGTATCAGCTCCAGAGTTATCGCAGTAA GACTTTTGTTAACTGATAGACATGCTAACGATGTAGGCGTTTTTGTTATC TCAAGTTATGCACCTATTGGGGTGGCTTCAGATATTGAATGGGAGAATTT CTTCGATGGACTTGATGATTGCATTTCGAGAAAGAAACCTAAAGACATTT TGGTAATCGGCAGTGATACAAACTCTAGCATGGGATGTAACGCTCAGTTG GACGAAGGCTACCCCATCGGAAAATTCGGTATTNaattaaattccgcgaa attcgatttttttccttcttcttttattttgttgtttttgatcaggtatt accaaaaaagatggacacaatttaagcattataacgtgtattttttatca aatgtaaacaaatataaacaactccatgatgcttaaaagttaatctaagt taGCTAGCTAGCAGCTACCACTTGTTTCCGTAAGAATAGTTATGCAACTT GGACGCATCCTCGCTCAAAGCTGAAACACCAAATTGATCACTTCATTGTt cagaaagaaaatttcaaatttgtgaTGGATGCTGGTGTTACTGAGCCTCT AATTGACTCTGATCACATAGCAATCAAATGTAAGCTACGTTTCATTATTC GCCTGAAAAAGAAATCTGTACCAAGACAAAGACTTGTCCGATTAGATTAT TCTAGATTGAAAATACCAGATGAAAGGAACAATTTTTGTCTGAGAGTCAA GTCCCTTTACGACAATgacaacaaacttcaaaatagtACCTACAGTAGGG TTGCTGAAGCAATTATAAAAACTTCTCATGAACTCTTGCCCCGAGCTAGA AAACCTTCACCGGGCTGGTTCCAAGCCGCCCAAGATAAACTGTTACCTTT AATTGATGAACGTAACAAAGCTTTGATGAGAAAAATTGACCGTCCGCTTC GATCTACCGTTAAGAAATTACAAACCGTCCGTAAACGTCTAAAGAAGGCA GTATCGAAAGCCAAAAACGAATGGATCCAAGCCCAATNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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AAGTCGAAATGCGTTGATTAGAAACCTCTATTGAGAATTTATATTGGTTC TCTTTGTTTCTCGATATTTTGCTTGAGCACTTTGttgttttatttcaatc tttttgCTAAACTTCGAACCTTTCACTCTTAACATTATCTCAACTACAAT CCAAGGTTTCTCAGCCCAACTCCCTTGATTGACATTTAAGATAAAAGGGC TACTGTGGGTGGGGGAGGCAGGGGCTATGTCATTCCAATAACTTTTTGAG AAATGATTATTTATACATCTTCATTTTATTTCTCTATTTGGAGTGCATTT CCCGGACATCTTTTCCTCGTGGTCTCACAAACCCTCTGTCCCCACTCAAT ACCAAAATGCTTTAGACGATACTACTAAGGAGgcttatgaaatattttta ttttccttcTTGAAAGCTAAACTTCTCAGTCCACCAAATAATTATGTCAA TTGTCTCTGACCCATGGATTTTTCTCTCCTCACCATttcctttgtatctt ttcagcTCCCAAAAAGATTTCACGCACGTTTACAAAGGTCATCGAAATTC AGATACAGGTATTCGACAATTGAAATGCATTTATGTTTATTAGtttcaac aaaatgaaaatcctactCTTTTCACGTTTAAGTCCCAATgcttttatcaa taaaaaattgaagaaatcgAAACAGAAAGGATGGACCATTTTCTGTTCAC AATAagagctttttttttttaaaaagaaagtaaattgTACATTTAGTTAC GATGTAAATCTGTAGAGAATAACCAtcattgttaaaattttcagtattca tgatatgcaacactggagtcttctgagaattttcaaaaagttcaacccaa tacttcacttaaacaatagaaaaagtgacgtattgggttgaactttttga aaattattggaagactctccagtgttgcatatcatgaatagcatCTGAAG GGAGCTTcaatatttaaaataaatttattgtGGCACTTCTGTCTTCTTTT GTTTCTAGTGAAAGGGGTCAACTTCTTCGGCCCCCGGAGTGAGTATATCG TGAGCGGTAGTGATTGTGGCCACGTCTTTCTGTGGGACAAAGAAACTGAA GAAATTGTCAACTTCATGAAAGGCGATGAGGGAGTCGTAAGTCAAGAACA TCTTATCGTCGTTGGAgagtttcactttttaaaagatatttttactTTGT GTCTCAATGGTGATATGTTTATGGCTGAATCTGTGATCTTGGGAGCTGTA AGCAAAGAATGATGCCCTAacaattattttttaagaaGTACATTTGAGAT AAGTCATCTCCGAATCACTCTAAAGTTTTTAGTTTTCTGAACTGGAATAA AGAGTTCCAGAATATAAATCACACAAAGGCCCTTATTGAAAGAAAACTCT AATTTTCTCCTAAAGGTGAATGTCTTAGAGCCACACCCAACGAGTTGTAT CCTAGCAACATCAGGGCTGGAACACAACATCAAGATCTGGTCACCCGTCG GTCAATCATTCAAATCTAATGAAGAACTGGATAAAGTATCTTTATGCTTT TTTCATATCTCTGATCATAGCTGTACTTGATTTTTATTCTACATTATGTG AGCCTTTTTTCTTAGCGAAGAGATACAATATTAAACTTCTTAAACAAAAT TAAACACGCCATAGATTTTAATAAGCGGGATTTGATAGATTTAATTCTCC TATTTTTTATGACAAAACATCTAAAAAGCAGTGGAGTGTAGTTCAGTAAA CAGGACCAACCTTTTAAGCTCGGTTAATTGTTCCTgtgtatattttcaaa atattttcctgtTACTTTTGTAGCAAGTAAGAGAAAACGCGGCAGCACGT GAAGAAGATCGCAAGCATGGTGGTGGTCGTGATTTGTTCTACCTCATGAT GATGATGCGCCGTATGAGAAGACAGAGGGTAAGTTTGGTTAATTTATCGT CGGCGAAAGATTTCTCCAGTCAATTTTCAGATGTGGGGGTGGGGGGGCTG TGACAGAATTTTGACAGATAAGTCACTCTACACTCAATTCTTATTTTTAT AACATACAAAAAAATAGATCTTTTTGTACAGGAATCAAATGTGCCCAGGA GATCTGGACTCTAAGATGTTCATGGCTACTGTCAATATTTGAAAGCTTCC AATATCTATTCCAAAAGCCACATACAGGTCAATAAAACGACATTACTGCT CATATCTTCCTTTATAAATCGCtgtctattcatgatatacaaCACTgaag agtcttctgagaactttaaagagtatcctcgcaaaagcctgaggacccta aggatcctaaggttcatattttgagaaaaaaagaaaaaaaagtgaggatc ctcaggttatcctcgcaaaagcctgaggaccctaaggatcctaaggttca tattttgagggaaaaaaaaaaattgaggatCCTCGGGTtatcctcgcaaa agcctgatgaccctaaggatcctaaggttcatattttgagaaaaaagaaa taaaaacgagGATCTTCAGGATACCCTCGCAAAatcctgaggaccctaag gatcctaaggttcatatttaaagaaaaaaagaaaaaatgtgaggatcctc aggttatgctcgcaaaagcctgaggaccctaaggatccaaaggttcatat tttgagaaaatacaaaaaaaggtgAGGGTATCCTCAGGATCCGGAGGATA AATGTGAAAAATCCGTGCTTAGCTCCGTATTAGGtagaacaaaaacagaa aagttgcaaaatttcgtgaagtcattgcagtggtgcatatcatgaattgc tcTTATCATTTCAGCAACGCCAACGAAGAAGAGCAGAGCGTTTGGCGGAG GAACAACAAGGGGATGGAGAGCGAACAACAAGTACTGAGGGGGAGGGAGA GGATGAGACGACAGATGAGGTGGACTCCGACGTCGAGTTGTCTTCCACTG ATGAGGATGAGGACGATGAGGACGATGATGAGGATTCAACTCCTATGTGT GCTCAATCTTGATTGGTTCAATGATTTCTCCGAACTGATTTTTTACCTGT TCTTGGTAAAAAGTGCTCTGAAGTGACGAGGAAGCATGCATCCAGTGTGT GTTCAATCTTGATTGGTTCAATGATTTCTCCGAACTGATTTCTTCTTTCT CTCACCTATTTTTGCATCTTCATGATAAAACGTGCTCTGAAGTGACGTGA TTGGTTCAATGATATTATTTGCTTCTCTTCATGATGAAAAACATGTCCAT CACCACAACTCATACATTTCTATCTAAATCAACTACATTGCTTTAATTTT ATTTGCGTTTTATAATTCGTGTAATACCCTGGATCGCTTTAGGATTCTAC AACCTATATTCGGTCAATTACCTGTTCCGAAAGTTATTAAGTCTTGTTTT TCCTCATATGCCACTCTTCACAATAAAGCGATAATTGGGATAACTGACAA CTATCAATCAATTCTATTCCAGAAATTTTACTTTGTTGATGGATTGAATG GAAATAtctactctcaggtacctaatagccgggggtttggaataagca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007000TCONS_00007000Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007000-proteinTCONS_00007000-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:10949..21146 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DCAF8DDB1- and CUL4-associated factor 8 Homo Sapiens
DCAF8L2DDB1- and CUL4-associated factor 8-like protein 2 Homo Sapiens
DCAF8L1DDB1- and CUL4-associated factor 8-like protein 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.21 12.83 6.23 4.68 43.41 35.97 42.43 46.45 37.16 40.21 39.16 37.19 35.73 38.66 33.7 35.92 28.27 29.12 34.56 38.78 25.83 27.35 26.65 31.46 34.83 33.31 23.42 21.32 14.23 13.14