XLOC_003787 (gene) - C. hemisphaerica

Overview
NameXLOC_003787
Unique NameXLOC_003787
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000070:176514..183216-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003787 ID=XLOC_003787|Name=XLOC_003787|organism=Clytia hemisphaerica|type=gene|length=6703bp|location=Sequence derived from alignment at sc0000070:176514..183216- (Clytia hemisphaerica)
CGCTCGTCAGCAATTGCTGGAAATTGAAAAGTTCCATAGTGTGAATGTAA AATGAAGTATTCAAAAAAAGTTACTTCTTTCGTAAATGGTTTGAATTGTA CTTTTATAGATCATCTTCACATCCACCAAACGAAGCTGAAAAGAACTCTC CCAAAAAGGTATTCTTTCTTCGTTTGATATTTAGTTTGTCACTTTAGGCA AGAAGAGTGAATTTCTTGTCCTATCTGCTTCAATTAATAACGACTTTTAA GTGTAAAACGATTCTTCAAAAACAGAACACCTGCATAGTAGATTCGATAA ATTAATGGCTACAAATAGAAATTGACTTTGTGATTTGCCTTAAGTATAAG CGACAGCCTGTTTATGATAAATTATTTCCAACTGCTATCACATGTCCAAT TTTAGTGCTCACCAGACAGTATACGCGTTTCCCGCCAAACTGACCAGCGG TATGCTCAAACTTCTATACCACCAGAAGCTAATCCAGAGGAGTCAGGTTA TTACACTGGTCGATCACACCCTCCAGTAGCTAATAGTTACACTACTGGCA TTGAAAGCAAATATCTGTCACAAAGTATGAAGAAAAATCCACCAAGTGCT TATAGTTACGAGACTGAAGACCGCGTTGGATCTTGGGTTTCAAAAAGCCA CCAATCAGCGTTGAATAAAAGCCCGATCAGCCAATCAGAGCAGATGAAAT ATTCGAACAGCCAATCAGATCGTCATTCTGGTCACTGTAAAAGCCAATCA GAGAGTAGAAGAAGAACACGCAGCTCAGATGGATCAATTTCACTTTCAAG TTCCAATAAACTTCGGTTGAATAATAGAAGACGAAGGTTTGTCACAAAAA TTGATCCTGTCAACCTTGAGTCACGAGTCATCCCTAATATAGTCCTCCAT GTTTAGCATTAAGTCCTGTTTTCAAGTAGAAAAAGTACACTTCACCTTTT ATTTCCCTTCAATAAGTAAGGGAATTAAACCTTTCAACTGACCTTGCAAC ATCCAGGCTACGAGAATGGTACAGGTTATCTGCAGGTTTATTGGCAGGGA TATATGAATTAATTTGATTCAAATTCAACATTCATTTTAGATCGCAAACA CAAGAAGAAACCAAGATTAAGAACGTCGACCCGAATAACAATTTTGACAA CGATAATATCAAAAAACTCTCCGTGACTCCTGAAAATGTTCGTCCGTTTA CACACAACAGTACTGAAGATAGCGGGTTCATGGACTATCGGTCCCATGCT TCGCGCACGCAAAGTCAACCGCAATCACCTTTAAGGGTCTGGGATGGAGG GTCTTCGGTGCCGGAGAATTTTCCATCACCCACATCCAACTCTCCAACAG AGGGCGAGCAATATCGACAACGATTAGACTCGCTTAGGAATTTTGTTTTG GCAAAACGTCAGGGAGATGGTAATACGTCTGGGACAGCGAGACCAAGAAG TTGGGTTCGAGGAAAATCACCTACTAATTATTCACCGAGTGTCGCTTCCT CGAGAACTAAAGGTAGTTTAAAACACGGAGACATCATACTTTTTTGCTTT CAATCCAATTTTATTTAGATCTAAGTTGAAATTTGTTAAGAATTCTAAAC TTAATCCAAACACGGCTCACATACACGTTTTTTTTTTATAATTTTATAAG GAACCTTAACTTTGCTCTGAGCCTGGAGTTCCTTATTTTTACAGAGAATT TCAGTCTCAAAGTTCCTTATCGAGTTCCTTACTACATAGGAAATTTTGAA CTTTTTGCCTCTTGAAAGATCAAAATTTGGTCAAATTAGTCCCAATAAGG TCCATTATTTTCAAATCCACTTATTCTCAGCCTGAGCAGTTCCTTAACAA TTCCTAGTTTTTTGAACCATTTTCAGCCTCGAGTTCCTTATAAACGTGTT CCTTATATAAAAAAAAAACGTGTATAAGATTAGATTTATTGAAACCCCAT CTAGCACTATTGTTTGAATTGCGATTGGGTCTCTTTGTGCTTAGCAACCG AGCTATGTTGTCTTGTTTCTTCAAACTTTTTATCACCAAATAAACACTAC AATGTTAATAAAAACTCTTTCCGACTTTGAAACATAGTTAAAGTTTTTTT TTTCTTTGAACAAAACATAGAACCGTTATTTGAAACCTCTTAGTCTTAAA TTTCATCACTACGTTAACAGTTCTGCAAAAAAAAGTTAATAAGGAGGATA GGTTCAAACTTGCTCACGAACGTTTGAATGAAAGAATAAAATCTAACGTA CACTTTGTGGGATTTTTAAAATTTGAAAATTGTAATTTTAGTGATGATGT AAAACCCTCGAAAATCCTCATTTTAAAACTGTTCCAAGAACGTTTTGAGT TAATTTATTGTAAAGTACTTGTTTGAAAACATGAAGTTGCTGTTATTTTC AGACCGTGGTACAGACCGTCCCTCAACATTACCAGTGCGACCTTTATCAT CAACGACACACGATCACAACAATAACACACAACATCATCCACAACGAGAA GATCAAGACATGTATAATAGCAACAACAACAGACTGAAGAAACACATACA ACAGCCACGACGATCATTACATCAAACAAGAGATATTGAACGACAATCAA TAGTATCGGGATCTTCATCAACAAGAGACAGGTTTGTTTTTTCGTTTTAT TTGATTTTAACCTCCATTGTGTCCAAAAATGAGATAAACGTTTTGTATCA GTCAAATCCTTGAAATATTACAATAACGTTGCTCACATTAGCCTGTACCA CCCCGCCGCCACGGGCGTTTTTTATATTTTGAAAAAAACTTGCCGAAGTT CGCGTCATCTTTTCAGTCAGCGAAGAAGAGTCTGGTGCAGGCTATGATTA CGTTGACTAGTCAATTTTTTAAGATGTCTACTAGATTGATCTTATAAAAC GCGTTAAGTAGTTTGGCTACATTATTTCCGTTAATATTTTTACCAATTAT TCCAATACACAGTGATAATTGCTTGTGATGCGAAAAGATAATTTCATTGT AATTGATAAATATTGGCTGGTCAGAAAAATTGAGTTAAATAAAGTTTGAA AAATATTACATTGAAATCGTTGAGGTGGTTTATAGGCATTTACGTCAAGT GATAGTTTAGTTTTATCTCAAATCCATCATGCTTTTTTACAGAGCTTTGG AAACGCTACAAGACGAGATGCATGACATACGTGATATAGTTCTGGACTTG AAGTCGTCGCTGCATTTAAAAGAACAAAACAACAATAACGCCAATGAGAA GAAAAGCCCAAGATTCGAAAAACATACTGCTAAAATGAAAACGACTCCCT CGAAATCAAGGAAAGTGCCGAAAGAAATCGATCCGAATTCGAAACAAATC GAAATGTTTGAACGATTGAATGATACCATCGAAAAATTATCGAATAAAAT CGAAAACTTTGATAAACACTCGATTCAATCCGATCAGGGCTCCTCTCAAC ATGAGGAAAGTATCATCGATGAAAATTCGAACTCGATTACTAATAAAAAG ACTGATATGATCCCTCATTTAGCACGTATGAATGAGCGAGTCGACAACAT ACAAGAATACATAAACACTAAAGAACGTGAACAAAAACTGAAAGAAGTTG ACGAACAACTATTACATCATCAAACGAGTTTGGTTAAAAATCTAGAAAAT AAATTACACACTATGGAAAAACAATTCAAAGAGTCAACAATTCGGACTAA CTCGAACCATTCACCTACTCATGACAAGAGTGATTTTACATCCACTTACT TAACGCCGACGAAAGAACCAAAGTTTTCTTCAACAAGATATGCTTCAAGG TGAGTCTCGAATTAATTTTTAAAGTGGGAATTTCTCTTAACTGAAATGAA GATAAAACTTTTGTTGTGAAAGAAAACTTGTATTCCGAAAAGACGGCAAA TTTAAACTCGTTTGACTACATGTTTTATTTATAAGCAAGTGTCTGTCCCT ATCTGTCTGGCTCGCATTATGCTTAGCATTCTATTGTTCTGAAACAATAG AGCCATTCTTTAGGTACCAAAAACTGAGCTTGTATGCTTATAAACGTTAT GTTTATAAAAGAAAAAACACGAATCTCATTTCATAGGTCACCTACACGTT CATCGACACATGATACAACGACGCCACGCAAACATTTTTTACCGCACCCA CGCCCACACCGCCATCAAAACAACTACAACGATACATCGTCATCGCATAT CATCCCTCCGCAAGCCACTCAACTGACACACAATAACGTTATACATCATT ACCATTCGTTTTGTGGCACTGTTCAACATCCAGAGGATCACCAACACCGT CATTCGTTATCGAAGTATGTGAGCATAATTAGGAACAAGAATTAAAAGAT ATTTAAAGGCTTTCTAAGGGGACTTTATTAAATACAGTGGAGTCTCCATT ACTCGAACACGCACGGAAAATTTTGTTCGGGTTAAGGAAATTTGGACTTA TGGAGTAAGGTCTCTAAGGTATTGTTAACTCAAGAGACGAGAAACCTGTT CGAGTTAAGGAAAATTCGTATTTTTTTTTAGTCTACAGCGCAAAATTGTT TGATTCTTTCTAAAAAGCAAAAGGTAGTAAAAATGAAATAGGTTTTCCAC CCCTGCCCGGCCATTTAACTCGTAAAGAACTTTCAGGCTACAATTGAAGC CTATCTTTCAAATAAATTACCATTTCTCTATTTTAGAAGTATGAATCAGA CGACGCAACATCAACGGACATATAATACTCCAAAAGCACTGGTAAGACCA TGTTTTTTCACCCATGATATGATTTATTTAAAGAAAAAAAATTATGTAAA CATAAGGCTAAAGTACAAAAAAGCTAAAAACATTTTTAGGTTTTGCGGAT TCCGCAAAGCACCCGGTTTCTTAGGAAAATGGACAAAAAGTACTCACTAA ACGGCGAAAATAAGAAAGAACGTGTATTGTCTTTTCTGTTTGTATGTTGC AATCGTTAAATGTAAAAGTGATTGCTACATTTGGTGCTCTCTGAATATGA TTTGCGATGAATAGTAGAACGTCGAATTAGTCAACTGTGTATACTTGGTG CTGACCGGCTGGACAGCTGGACAGGTGAGACTCGAACTTACGAACCTGAC ATTCGATATATTGAGTAGTATCCATGCCCAACCAAATGACTGAATCAATC TAGCTCAGATTTTTTAGGGTAGGTCTGGGCTTTGCTCACCAAAATATTTC TCTGATGTTACTCATTGATTTTACTTCTCTTACTAAAGGAATCAAGTCAC ATGTATGAATCCATAGACAGTGCAACAAAGGCTGCCCAACGAATGGAGAA TTTATCCAAACGAATGTTATCCACAATTGCATCTGATCTTTACAGTGCGG ATGAAATGAACGAATACTGAGCAAGGAGTACTGGTCCATTCAAGGAAGAA GGATTTTACAGACGCTACTACAGGGTTGTTGTTAGGACCCCATCGTCAAA TTGCTTGCGTTTCTATGACTTGATCTGTTAAAAGCGTTGATGAAACAAAG GAAGACAAAGCTAGTTTGACTTTTTATACGGCCTTTGCTTGATCATGCTA TGTCATTTTCTTGGAGAATTCGTCGAAAAGGACTTTTCCAGAAAAAAATT GAATATGGGGGTGGAGGATATAACATTTTTTGGAATTTTACCCGCCGAAC ATTGTGACTTTTGACCCCCGGACATTGTGACTTTTGACCCCCGAACAGCG GGTCTAACCCCCCGGACAGCGGGTCTAACCTTGCGGACAAGCATTAGTTG ACCCCCCTGGACACTCAAAATTACCCCCAAACAGAGCAAAATTACCCCCA AATAGAGCAAGGTTAACCCGGGGCACTATATCCTCCACCCACCATGTACA AACATTTTCTGGGAGAGCCCAAATTCAACTTTGAAGACGGAGTTTGTCAC TCTTTGTGTTACTTTTATTCTCTTTTTCAGATTTGTTGATAATTTTATGT GCTATTCTAGGAGAAATCATACCCCGGGATAAGAGTTTCATCCTCGCAAG AGTTGTCATGGAGCTGGTATTTAACACCCCTGTCTCACAGCCACGGTGGA ACTTTTTTTCTCAGTGGGGATAAAAACTCCTGTTGAAATCTCAGTGTTGA TAGAAATTCTATTGTTCCAAGGTTAAAAAATCCAGTGGCATGGGTTTGGA GCGCAATTTTTAAACAATGAATTTCAAAGACAATTTCCCAGTTGGGCTGA AGTTTCAGGGTAATTTCCCACTAGGGACGACATTTTGCCAAATTTTTCAG TGGGGCTGGGGTCCCAGCGGGTCTGTGACACAGGGGTGTTATTTAAAACG GAGGTTATTTGTTTAACGATAACAGCATGTTTCCGACTCTGTCCGTCCGC CGAGGGACTTTTTAACACGGGGTGTATGTATTTCACCGGGATAGCCAAAC TAATGGGATTTTTAAATAGAAGTGTGTAAAATAATCATTTTAAAGTTTGT TATCATATTTTGAATTCATAATAAGAGAAATATGTTTTTAGATTTTTAAA GTACAGTCAACACTTTGGATGTATATATTTACAATGTTTTTTTTTGAATT TTTAGTCGTATAAAGAAGAAAGGTACTGGTTATTACTGAAATTTCATTAA ATCTTCCTAGCTTAACCCATTGAGTGTAAAGCCTGATGGGCTAGAGAGGA ATCTTCCTCCTTTCCCAAACATGAAAAAAGTTTTGCGCCGCATCCGGAAC AAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006775TCONS_00006775Clytia hemisphaericatranscript
TCONS_00006774TCONS_00006774Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006774-proteinTCONS_00006774-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070supercontigsc0000070:176514..183216 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.64 1.53 1.15 0.83 72.94 54.37 45.89 51.98 21.25 36.88 25.68 22.54 10.45 11.18 10.01 14.62 7.81 8.95 8.33 8.47 6.86 7.04 4.46 5.85 19.4 20.34 30.58 28.18 34.79 36.73