XLOC_003611 (gene) - C. hemisphaerica

Overview
NameXLOC_003611
Unique NameXLOC_003611
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000066:751331..759470-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003611 ID=XLOC_003611|Name=XLOC_003611|organism=Clytia hemisphaerica|type=gene|length=8140bp|location=Sequence derived from alignment at sc0000066:751331..759470- (Clytia hemisphaerica)
TTTTAGAGGAACACAAGCTCCTATGACCATTTCATGAAGTATGGGGCAGG TGGTCGACTTTCTTTCAATGGGAATGTTGCAACAGTTTTCGGAGCTACCG GATTTCTTGGAAGATATGTTGTCAATAGACTAGGTAGGTCTAATCACTTA TGCTATACATCAATAAAGAATAAATCGATCAACAGGAAATGTTTAACTCC TTTTGCTTTATTTTGACCATAGTAGTCATAATTGTACTCCGCTTTTTTCA TTTTTAAGGAGGCTTTGTTTCATGTTGTAGTTAAACATTTAAGCTTCAAT GGGCTTTGTACCCCCTATGTTGAGATCTATTTTTTTTCAAGGTGACCCCC CCCCAATTTTTCAGATCCCTTGAATTTTTTTTCTCCCTTTTTTGAAAGCC TGGATTTTCGACCTAGTTTTACTGACCACCCTGGATTTTCAATCTCATTT TACTGACCACCCTGGATTATTTACACTAGAAAAACCAGACCCCTGGATTT TCTATTTTCCAGACCACCCTGGACGTCACACCTCTTCAGAATATGAAATA TATACAGACTATTTCTGGAATAGCCCAATTTCAACAACTTATTTTCTTCA TGGCCTGAAATTGGTCTAGACTTTGAAATTTCTTGCTTTAATTGATTAAC AAACCTGGATTGCTTATAATTTACAGCGAAAACTGGAACACAGATTATCG TTCCGTTTCGAGGCGTTGACGAAGACATCAGACATTTACGAGTGATGGGT GATCTTGGGCAAATCGTCTTCCTTGTATGATATGTTTCTCTCAACTCGAC TTTGAACCCCCTTTGAACCAATCTTTGCTTGAGCACTTACTACCTTGTTA CACTTATATAATTAATCAAGTATTTAAAACGGGAAAATGAATGCAGTAAT TCATTAATGCGAAAGACTTAATAATTTTCAAAAATTACATAGGCTCAAAT CCTGTTTAAAAACTGTTGTAATTAATTCGAGGGCAACCGATTTGCGTTAA TAACTTGATTGTAAATAGTTTTCCTTGCCATTCGTCGCTTTTTTTACTGA TGAATATGATTCCATCTTTTTCTTTCTAGGAATACGATATCCGAGATGAA GAAGCTGTAGCCCGCGCAATGTCCCATTCAAATGTTGTTATTAACTTGAT TGGCAAAAATCACAGCACTAGGTACAATATGATAATCTCTTCCCTTTCTT ATAAACTTTCTAAATGTAGCACATGTTATCGAGTTAGATCACTGTCTGGA TTGAGCGAAATTCTGTTACATTCTATCTTACTTTGGATTTTGTGTGTTTG TAATAAGCAGAACCTCAATAGAAACTTTTTCAGATTAGCTATTCTGACAT ATTCTGATTAAACAAATCTGATGCAAGCGATATAAAACTTTTCTTTGTTG TTTTTTTTTCTCAGAAATTTCAGTCTTGAAGACGTGAATGTGAAAGCTGT GGAGACGATCGCCGGAGCTGCCACCAAACAAGGAGTGGACAGATTGGTGC ATGTGTCTGCGTTAGGTGCTGAAGGCCGTTCGCCATCCAAAGTCTTTCAA TTGAAAGCTCAAGGAGAGCGCGTGTTGACTGACCTCTTCCCTCAAGCCAC CATTGTTCGACCTGCTGAATGTTATGGTCACGAAGATGATTATTTCAACC GATATGCATGTAAGATGCTTCGCTTTCTTTACTCTTTCGTCATGCCGTAT GTAAACCTTTTTATCATCAAGATGGCATACACTTTATCTTGATTGTGCCT GACGGACCTCTTAACAGTTTACACATTGAAACCTTTCGTAGTATGTAGAT AATCCACGATAATCAAATCGTAATGTCTTCAAACTGTGCAATGTATATGA AGCTTCAAGAGAGGAAATATCAATAAGGAAGGATGTTCAATTTTTAACAA AAAAATGTTTGCATTTAGATTTGAGGAAGCTTCCACTGGGTGTACCTTTG GTCGATGGAGGTTGGAAGACTACCAAAAGACCTGTCTATGTAAGCTTCAA ACAAATTTTGTTTCTCTGTCTTAAAGCTTTAGAGCGTCGTAAATACTTGA CAAATGGTCGGATTTGGCTAACTTGGTACAATATTGCTCCTTGGTGGAAT ATTAAGCAAATATTACACAAAAATATTTACTATTATTATTAATATAATAG TTATTTAATTCAATTATTCAGTCTCACTTTAATGATATTCGACTTAGCTT TATATATGTGACATTTAAATAATCATTTGATTAGCTCGCTGCTACAGAAG AGATATTTTGCTATCGGATATCTAAAAATATTCGACAGTGCGTTTTGCCT AGAGGTGGACGATAATTATAGATGTTTGATTCATTTCAAATATTTTGATT TGAAATTTTGAACAGTCAGAAGACAGATCTTGAGTAAAAAACAACAACTC TTATTCTTGCTTATGTTTGCTGATCTCAACTCTACCTTCATTAATAGCGA ATGGGTTGTTCTGTATGAATCGGCAACCTAACGATTTCTTTATTAGATTG GAGACGTTGCACAAGGTGTAGTCAACGCGAGTTTAGATGCTGATTCCAAG GGAAGAACTTTTGAACTTTATGGGTGAGTTAGACAAGTGCTCTATCTTGT TTATTTTGATGGCGAAGGTGTGTTTCGTTTTGCAAATAAACAAAAAGAGT TCTATTGTTCGGATGCATAAAAGCAGACGGAACCCTGAGCCCCTCGTTCA TGTTTTATAATCAACAGGCTTATAAACATAACCCTACACGTTAGAATTTA GGCTTAGCAATAGATATACACACCCCTGTCTCAGTGACCCGGTGGCTTTT AAAATTCCACCGGGGATAAAAATTTTTCTTTGTAAATCCAGTGGGGATTT TTCAAAGACAGAAAATACCAGTGGGGACACAGAATTAGAATGAAAATTTC AGTGGGGATTTCGAAATTGTCTTTCTTTTCCAAGTTTGTTGAAACAGTAC AGTAAGTGTGATAGACAAGCAGTTTTATTTCAATCTTTATGTAATTATAT GGATATGCATAATGCATAATAACTTTTTTCTTTCCTCCCACCCAGTCTTG ATTGGGTCAATGAGGCTCATTAAGTTGAATTACTTATATATTATTTCCTC CCTAAGTTTATTTGGCCAAAATTTCCAAACATAGACCTTTCATCTTGAAT GGGTAGAGTAGCAACTATTTGCTAACATGACAGCTATAACAAGAAATAGA CAAGCTGTATTGAAGTAGCTACTTTCCTAGGACAGTTGCCATATATATTT GATGAGATCAACGTCCTCATGATCGCGGACATAAATATTGTATACCATGA TCCTAATGACCAGATTATCCCAATGGTACAAGATCGACTATTGGACCAAT CGACTGTCAATTTAATATTACCCCACTTTTTTCGGATTGGATTGTATTTG GTTATGTTTACAGGAGGGATTTAGGATTTAAAAAGAGTGATGTATCTCTG CTAATATGACGTAACGGCTACATAAGTGTCTAAGGAGGCGCCACCATGGT TGGGGCCGACGGAGCAAAAAAATTTTGAAAATAGGACCCTCTAGATTGGC TAAATATGGCCTCAAAGTTCAAATTTTTGACAGTAAAACACCAGTTTTTT GGTCGTAATATAGCAAAATTTCAGGGTCTTTTCAGAGTGGAAAAGGAAAA TAATGGGTTTCCTAGTAGTTTAAAAATTTTTCGTACTCAGGTCTAGAGTT CCTAAGCCAAGTTGCTTTTAGGCCATTTTGAGGCCTGAGCCCTTTAGTAC TGCGTTGCTTATAAAATTAAAAACCGTAAAGCTAAAAAAGTTATGATAGA AAAAGAAAAGATCTCACAATTTCTTTTAAAATCCATTCACTTTTTGAATA AATAGGTATCTCAACAAAAATAATGTACCCCGGGGGGGGGGGGCAGCTGG GCAAAAAGACCGACGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNACCAGCCAAAACATAAAATAATTCACAATAATTCCAAAAAAA TGAAAAACATTTCTCAGTCAAGCAAATGAATTCTTGGTTCTTTATTTTAA ATCATAGCTTATGGGTTTCTTTACTTCGTGTATATGCATGTCAGGATGAT AGCGGAACAGGAATATAATCCATCAAAAATGAATTTAAAACCTATTCCCA AGTTAGTTCAAGAAATGTCGTTTGATGTTTGAGCTCTGAGTTTGGGAAGA AAGCACGTCAAATTATCAATATCATTGACCGATTCATAATTTTGATAACA AAAATCACATTCATAGTCTTGAGAAGTCTGTTTACAATCTCTTTCTATCA GAGCTATTTGACAGGTTCAGTATCATATGCAATCAATTCAGCAATTTTGT CTTTGTTGGTCACTAGACTAGATAGCCCTATCATATGCTTCTGCTGCTGC TGTATTTTGCATGCCATGGGTCATGCTGTAGACATGGACAAAATAAAATC CTCCAAAAATTCCTCACAATAAGATTCAAAGCAAATCATTCCCATAATTT TTGAGTACTTCTACAATGACAATATCCATTCTCTCCCTTGTATAAATTTC GTCTCATGACTGTTCTTTTTTCTTGAGGTAGAAATAAATCCAGACAAACA TGTCCCTCTCAGGACTCAGCTTCTTGCAAAGTTTTCCAAGTTTGTTTTCC TTCTGTCTTCCTTTTCATCATAATCACATCAATCCATTATTTTTAACTCG TACATAAAAAAGTCATAATATCTCAACATGACACAGTGGGAAAAACTCTT GTCTAATGCTCATTTCTAGACATGAATGTTCATAACAAAAAATCGGGATT TTCTAGCCTAACTGAGCGCGTACTACTTGGGTAAAGAAATCTGTCAGTTT GTTTCGCTTAGCTTGCGAGCGTGCAAAATATATATTTAAAGGTATTTCAA AATCAAAACAAATATGGTAGACAATCTAAATTNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNTAACATAAGTTTTCAAACTAAAGTTTT GTATAAATTCTGTTGATGTTTTTGAGCATAGGCGGGTAGCGGGGTTTTCT CAAAATCTTCAAGTTTCAGTGGGGACCGACGGGAAAATAAAAATTTTGAA GAGCTACTTAGTGGGGATTTAGAAAAATTAAAAGTTTTCAGTGGGGATTC CCCGGAGGCAAATTTAGCCCGTTTTTTTCCCCGGGGACAAAATTTTGGAC TTTTTTTTCAGCGGGTGGGGGTGCCCAGCGGGTCTGTGACACGGGGGTGT ATATACCGTCGATATATATTGTCGATGATCAAGAGAAAATTAAACATATG CCTAGTCTCGGCTCAAATAATCATTTGAAATAATGTGTAGCCAGTTTAAT GATTTCATTATTTTTGTCATTTCAGTCCAGAAGAATATTACTTGCATGAC ATGGTGGAATTTATCTTCAAATCCATCAGAAAACCTTTCCGCAGTTTTCC AGTTCCCGCTATCGCTTACTCGTAAGTTGTGAATAGCGAGTATAGAAATT GTTGTTGCCTTGGGAGGATCTTATTCGCATTTTGCTAAAGTCGGTCTTTT ATAAATGATCTTCATCTTCGACTTCTAATTTTCTTTGTTTTAATTTTAGG GTTGCTGGATTTTTGGGAGAAAAATCAATCTTTAGTCCTCGTCTGACAAG AGATCAAGCTATCAGGGTAAACAGTTGTTGTTTTTGTTTTTAAGTTTGTT TTTTCTGATGTGAAAAACTCGAAAATCTTGATTTCCCCATGGAGGTATAA AGAAAAAGGAGTATGCTATTGTAACCAAGCTCGCCCTACGATTAAAAAAG TTACGATGTATGCATGCTCATAAACTCATATATCGTGCTATTTTGAGCTT TTTTATCCATAGGTGAAATCTTATTGGCTCATTGAAGCTTTAAAAATTAG TTGAGACGAGATTCATTGTTTCTGACACAAAGGCCTGTAAATTTGACAAT CCTTAATCAAATGATAAGATTTTTCGATCATTGATACTTTCCTCCAAAAT TCTCCAGTGACTTTATGTTTACAAAATTGAGTCTGAAATCGTGTGTGCTT ATAAAAAATTTTTCATTTTCTGGCTTGAGAAAATATCTTTTCAAAACAAA ATTTTACGGATAACGAAATTGAACATAAATTTGTTTCGCGGACGAAGTTT TATTTAATTTTGATATATTAAAAGGCTAGAATCTGATAGTATAGAATGTT CAGAGCAAACTTGAGTTCTACAAAGTAAAGACTAGGAGCGTTTGGCGAGG TCGCCATTTTGACAGAAAATGTTAAAAATCCAAATAACAATAGAACTACT TGGAGTTTAAAAATATAACGAAAAATGAGAAACAAACATTAATAACAGAT TTGCTATCCCTTATTCTCAAATAAAAACATTGCTTCATACTGTTTTTACC TTTCAAAAACAACTAAAATCTGGAAGACTGTAACAGTCCGCCTAAGCAAA AGCATATTACCATTTGGTAGTTACGGTAAATACTACCCAGACAATCAAAA AAGAACGACAAATAACTATTAAAAAGCGACAAAAAATGACTAATCCTAAT CCTAACTATCTAAGAACGACATATTTCAAACCCTAACTATCAAAGAACGA AAGAACATATTTCTTCCCGACCGAAAGTAACTGTACCACCCCTACCGATT CATTCCTTTTTGTTTATCACGTGAATTAACAGCATGTGGTTTAAAATTAC GCATGCGCATAAGTCTTTATGTTAAGCATTTACCGTATCTACATTTATGG TAGATTTACGCATTCTACATATCTACAAATATTGTAGAAATAAGTGTGAG AATGTGTTGATTTTTCTTTATACCTCCATGATTTCCCGCGCTACGGCTGT AATATACAACTCTCTAGAATGTTCTATAAGAGCTATTGAAATGTTATGCA TCCCAATGTCCATTCATTCACTCACTCACTCACTCACTCATTCATTCATT CATTTATTCATTTACAGCAATTTTTAACGGACGAGGTAGCAGATGATTCT TACACCTTCGAAGATTTGAACGTCACGCCCGGAAACATGAGCAGCACCGC CCTTACCGTGCTCCGAAGACATCGTGATTATTATCATCATGATGAGATCA TGGATGAAGAAAAGGACTACTGTCCTCCTGTCTCCACTTACATTTCTTAG GGAGATAACTATTTCTCTATTTCCACCTAAGGGAGATAATCACTAAATGA AAATATGTATTTTTCCAAATTTTACCATGTTTTTTTGCGAAAAAAGAATG CAATGTAAATACTTAATTAAACAATTACGAGATTCTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006338TCONS_00006338Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006338-proteinTCONS_00006338-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:751331..759470 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NDUFA9NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
335.63 344.85 444.74 457.94 221.25 181 188.28 196.09 223 217.75 232.93 232.95 200.07 222.14 182.65 206.09 323.16 324.41 164.64 152.41 316.87 326.94 195.85 197.72 268.36 281.41 163.24 163.75 135.66 130.62