XLOC_003579 (gene) - C. hemisphaerica

Overview
NameXLOC_003579
Unique NameXLOC_003579
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000066:370455..374638+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003579 ID=XLOC_003579|Name=XLOC_003579|organism=Clytia hemisphaerica|type=gene|length=4184bp|location=Sequence derived from alignment at sc0000066:370455..374638+ (Clytia hemisphaerica)
tccaaaaagtcACGGTAATCTTTACGATTACTTTATgattataattatta
taattGGTCCATTCCATAGAACACATTATTGTCTGGTATTCGTTTGCATC
CGCAAGAAGGTTATTGGAGAGAACCAGGAGTAAGTCCTTACAAAAACCAA
CAACGAAGAAGGAAACGAAGAAGTCCCGATGAAGAAGagcaaacattcga
aaaacTCGGTCAACATGCTGCTAAACTGAAAGAAGCTCTGGAACAAATCA
AAACACCGACGGGACAGAAAGATAACCCATCTCGATATTGCCGTGATTTA
ATGGAATGTTCACCGAAGTTGAAAGATGGGTTTTATTGGATCGATCCAAA
CCAAGGGAATCCGAGTGACGCAATGTTTGTGTTTTGCAATTTTACTCGTG
GTGGAGAAACTTGTGTTTATCCTGATGATAATGCAGCTTCTGTAAGGATA
GTTTTGCCAGTAATCTGTACTTGCTTTTTATTTCAGTTGAGCTCGAATCT
GAGAATACCTTCGTTGCGTTACTTCAGTTTTTTTAGAATCATTCCTTGAG
GTCTCGTTGCTTGTTATTGAACAGTAGCGATAGTGGATCTAAGAAATGCA
TCATATCTAATTACAAATattgtcattttgaattttaggaCCAAGATTTT
TCATACGATATGCAGAAAAATGATTGGTTCAGTCGATCAAAGCGTGGTTT
CATGGTAAGATTCGAGAATGCTTTTAAAAACTCATAAACTACAGTGATGA
GCTACAATCTTTTAATATGaattgcaatttttcccttgaatttcaaatgg
tgGGGCCCGGGTCTGTGAACCAGCCCCGTTGTACTACATTTCTCTATTAT
GAATAACTTAAGCGTTTCATCGAGTGTTACATCTCAAATCTGAAACCTCA
AGAATGACATACCTTCATTTCTTTGTTTCAGATTGGTTATAAATTCGTTC
GTAAATCTCAATTGAAGTTCTTACGGTTACTCAGCGATTCAGTGCATCAA
AAAGTTGAACTGAAAACCCAACGTAatataaatattgaaaagattTCATT
CCGCGCTTTGAGCCACGCCAATTCAGAAACACACCTTTTGGATCAACAAG
TTGtcaaaagcttcaaaagaaaTTGCAAGGTAACAAAGCCTCTTTCTTCT
AAATAAAAACTATCGGGGTAGGGTTGGTACCACCAGAAAATGTCAAACTG
TATTGCATGTACCGGAACCCTTTGACATGTTTTAAAAGAAGGTACTAGGC
AAAAATTTATGTGCATGATATATATGAtggaaaatgttctcaaaaGGTGG
AggttaaaaagttaagaaattcGTATGCAAATGAGGTGATACCTAAGTGT
ACaaaattgaatttattgaaTGATGCCACAAGATTGAggtatcacaggaa
aaaatgttcgattgttggaaattttggttttataattgaaggttggaaat
ttgagcgattacttTAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaaacagtttg
gaaaacgttaaaaatccatgtggaaattacatttttgtgaaattgaaact
ctttcgattggaaaactagactttttgggtcggaaatttgtgtttctcca
aacagtttggagaacgttaaaaatccatgtggaaattacatttttgtgaa
attgaaactctttcgattggaaaactagactttttgggctggaaatttgt
gtttctccaaacagtttggagaacgttaaaaatccatgtggaaattatat
ttttctaagattgagactctttcttggaaaactagactttttgggtcggt
aatttgtgtttctccaaacagtttggaaaacgttaaaaatccatgtggaa
attacatttttgtgaaattgaaactctttcgattggaaaactagactttt
tgggttggaaagttttgtttctccaaacagtttggaaaacgttaaaaatc
catgtggaaattatatttttctaagattgagactctttcttggaaaacta
gactttttgggttggaaatttgtgtttctccaaacagtttggaaaacgtt
aaaaatccatgtggaaattatatttttctaagattgagactctttcttgg
aaaactagactttttgggctGGAAAtctgtgtttctccaaacagtttgga
aaacgttaaaaatccatgtggaaattatatttttctaagattgagactct
ttcttggaaaactagactttttgggctGGAAAtctgtgtttctccaaaca
gtttggaaaacgttaaaaatccatgtggaaattacgtttttctaaccatt
ttctgcgcatgctcctttgagaaaaccacaagcgatttttcgctcaaaac
tgttttgatttATAGCTAACCTGGATATTAGACTATAATGTgtgcagtca
agctgtaagtttccgtcaggtgaggcgtcgcttcggagcggcctcggtca
atcgcagtgagttcgcacagtgaagcatATAGGGTACAtggtcatagttt
caaatagcgccctgctgagctgtgtgagtgatctaagatcaaccacgtat
ctgtgcgaacaataacgagagattgaccgggagccagcgagcctaggcta
gcgagtgaccgttcacaaaaacaataaccttgtttaagatctcttttccc
catctctgccatcactttttggattttggcttttttcaaccgcgattttc
gaaaattccaaccttgttaaatttggattttagcttttttccaactgaat
tttaaaaaattccaaccttgttttagttggattttggcttttttcaaccg
cgattttcgaaaattccaaccttgttaaatttggattttggcttttttcc
aactgaattttaaaaaattccaaccttgtttaagttggattttggctttt
ttcaaccgcgattttcgaaaattccaaccatTCAGTTtgaattttggctt
ttttcaacctcgattttggaaagtttcaaccttgtttaagcttaGATTTT
Ccgttggattttatcttttttccaactaagaaaacttgaaatttccaaac
ttggaaatcgaaaattttttcctgtgtatggAGATAGCAACTAACTCTCC
CCCAGTACTAACCCAgcttgcacacaacgttgtttcaacgtttatttaac
gttatatggacgttgtgaacgttaaataaacgttgaaacaacgttttgtg
tcAGCTGGGAAGGACGTATCTGTAACTTGTTTCTGAAATGCAGATGTAAA
CTGTGCGAAAAATACTTCACTTTTTTATATAGAACGACAAATGCGCATCG
GAATCAATGCTGTCTACAGATGACGAGAGAATGGATTTACTCCCAATTAC
CGATTTCAAACTGAACACTTCTCTCCAAGACAATTCTCAATTGGATGTCA
ATTTGAATTCTATAGATACGGACACCATTTATTTCACGTTACATGTTGGA
CCTGtttgttttcaatgaaaattttctccgctaaattctaaaaaattgat
CATCATTatcttttataatatttttttttgttgttaaagGGGTTCGGTTG
TAAATAGCAGAATCATTTTTTTGTTCCGATTTTTTTAAACACGCACACTG
CTTGACAAATAACTGCAATCTTGACAAAAAGTGACAAAAACATAGTTCTG
GCAAAAAGAATCACCTCTAATTAACTCTTTTTCATTGATACAAGCAATTT
ATCACATTCAAACTTTTAAATCTTTGTCAGCGTTTTTTTTTAGAgattta
tttgaaatatttctatcGCATATTTATATTACAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006265TCONS_00006265Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006265-proteinTCONS_00006265-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:370455..374638 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.38	2.18	1.41	0.91	14.96	11.33	20.2	22.38	11.5	17.29	11.49	11.96	52.77	62.86	12.37	10.55	24.28	23.85	68.7	52.16	31.24	32.39	20.58	24.35	35.38	33.52	5.17	5.46	14.28	13.71