XLOC_003500 (gene) - C. hemisphaerica

Overview
NameXLOC_003500
Unique NameXLOC_003500
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000063:373958..377374+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003500 ID=XLOC_003500|Name=XLOC_003500|organism=Clytia hemisphaerica|type=gene|length=3417bp|location=Sequence derived from alignment at sc0000063:373958..377374+ (Clytia hemisphaerica)
TTAGCGGTCCAGAGTGACCGACAATCAAGGTAATCACTATCGGAAACCAG
TTAGTACCCTAGGCAGCCCTGGTTGATCAGTTTTCTCTATTTGATTTATG
ATAAATACGAAGCCCAGAACATATGGTACAAAGCTACAAAACCCAACATG
TGAAGCAAAAAGCCCAAAAATATTAGGTCTAAAGCCCCAGAAATAAAAAC
Atcacttttgtattttttgacaaacaacttggcgaaaatttttgcaatgc
TAGATTTAcagttaaataaaaacaaaaacaaaaaattgctGATGTCCATA
ACACACTTTTgtttttagtaaaaaaagtgataaaaatttataaaatctaA
TACCGGAAAATCTCTATAATCGAAGGAGCATGTCTGCGCTAACCAACACA
TCGGTAGATCCTAAAGGAgcatttcaaagaaacaaaGCTAAACATGGAAA
TCTCATCGCTAAAGGTAAGAACAATTTTCTGCTTGGATTTGTGGCCGCAG
CATGATGCTCAGCAAGTAAAGAGACGAATCACGgataagtggagaaatcc
agggaaaggagtggcgcccctCCCTACCTTCGGATAGACAGCTGGAGAAA
AGAGAGCTTTCGGGTCTACCTTGACTGCGGTCCCAACTTACTTAGATTTG
CAAGTACGGTCGGAAACCGCTGATAATCAAAACCGAATATCTTGAATAGA
CTTTTTGCTGATTACGATACCTCCATATttctatctaactttcatcgtca
ggtaggtccaatcagcATCCAGCTTATCGTCTATGACACAGGGTGTCAAT
CTATTCATTTTATTCACGCATTATCTAATAAATCAACAAATTTTATAGGT
GGACAATATCCACCGGAGGCGGGCCGTTATCATTTGCACATCGCATTGGC
GTGCCCATGGGCGGATGGCGTTTTAGCCATGTTGTTTTTGAAAGGGTAAG
GTTTGACTATCTTGGTATTTGAAGGTGAAAAAAAGCAAATTATTTAAAGT
TTGAGTTTTTCATTTACGCTAAAGTTTTACTTCTTATTGCTtatctcaat
taatttttttaagaaaaatatttgaggGTATAGATCAAGCCCTATTTTGA
GAAGTCTCAATCTGATTATACTTTTAAAGAAACTCAAACCACCCTTCTTA
CAAATTTTCTACAAATCTTGATTTTTAGCTTAGATCACTTGATCTCGCAC
TCTATTGTTCATCCCACGTGGGGTAAAACGAAGCCGGATGATGACGAAGA
TACTCATTATGGATGGATGTATAAAAAACcaggtttgttttcaagtctTG
AGTagcctattcatgatatgcaccactgcaatgtcttctgacattgcATC
ACGgaaccaacagctgattggttggaagtgacgtaaaatcagtcaatacg
taactttgaaccaatcagctattgggtggaatggaagacattgcaatggt
acatatcatgaatactagACATCGTGTCTCTTTTCTACGCGGTAACGTCA
ATTCCACTTTGCGAATTTTTCGAATGCtccaaactttcaattttttgacg
tcactttacacttttgaagctcttgcagtagcgaaaaaatagaatttacg
tcaaaacacttgaaagacttcttttttcaaaaacggAATAAAAAATGCCG
GTTTTGGTGAGGTACTTGCTATtgatgatatgcaccactggagagttttc
tgagaacttttaaaatcttccacccaatacgtcactaaaacaatagaaaa
agaaaaaaacagaaaagttgcataatttcgtgaagtcattgcagtggtac
ATATCTAATTTTTGCGAGGAGTTATTTTCGCAAATTATGAATGATGTTTT
CGCGCATATTAAAGTTCTTGAATCTCCCTTTTCTTCtcttaatttctttc
attttcctagaggtTTTGGCGAAAATTCGAATCTTCAAATTTCGTGAGGA
CTAATTTTCGGAAAAAGGGCCAATATTTGCGAAAATTGTGAAAGTTAATC
GACGCGAAACTCGACCAACTTAATTTGCCCACGGCTTACAGAAAAAAGGA
AGTAGTCCTGCAGAATTAGGAGGTAAAAACTGTATTGTCCAGGGTTAAAC
TTTGCTGTGTGTAGGAGGTAAAGTTGACGATTTTCCATTGGCGAGGTGTA
TTTAAATGTATATCATTCTACATTCTGCATTTTGAGCTTGACGTCAATCA
GCCAGTCTGAGAGAGAGTATTATGCctgtgaaggtagagagtctttTACC
AGGAATTGAAATGTCTAGCTTATTGAAAAATTAAGCTATCTGACCAACTC
TCGCTAATTTGATCTTTAATGGGGAATTTcatttgttcgaattaaagaaa
gattcaaataatggAAGTTCGAATTATAATCGTGTATATCCTCATCATTA
CAGGTGACGATCCATTGCCCAATCCACTTGGTCATGGTTCAAATGAATGT
GACGATGCTTTGATCCCTGATACATTTACAAACGCCAAATCTGTCCGTGA
AGTTTACAATCAATGTGGTGACCATTCAGGCCCCTTCTCCACACCCCTTC
TGTATGATAAGGAAACCAAATCGATTGTTTGCAATGAAAGTATGCTTATC
TTAAGAATGCTAAATGACGAATTCAATGAGTATGCAAAACACCCTGAGAT
TGATTTATATCCAAAAGAGCTTGACGAAGAATTGCAGAATCTAAATGAAA
CTTTGGTTTATCCGAAAATCAATAATGGTGTTTACAGATGCGGCTTTGCG
AGGAGTCAAGAAGCATACGCTCAAGCAGTCACAGAGCTTTTTGAGACACT
CGAAATCTTAGAAGATCGTTTAAGCAAACAACGGTATTTGGGCAGTTCGA
CTAAACTCACCTGGCTTGATTTGAGGCTTTTTATGACTCTAGTACGTTTC
GATCCTGTATATGTGACATACTTCAAGACCAACAAGAAACGTCTGGTTGA
TTATCCGAATCTTCTTGACTTTACCAGAGATGTCTACTCCAATGAGAACA
TCAAACGGGTGATCAATTTCAAACATATTAAAACTCATTATTTTACTTCT
CACCCTGTTTTCAACACATATGGTATTATACCAATTTACGACGGCCCGGA
TTTGGAATTGCAAAGTGGCCGTGAACAAATAGGACATTGAGCCATATTAA
TCTTTAAACTTTGTTTACCAATAAACGTGGAccgatgttttttcattttc
atcttaaacATTTTTACATTCCAGCACTTTTGTGTGTTATTCCTTATCGG
AATGCAATAGATTTAATTATGGAAGTGGAATTGCATTGACGTGACTTGTG
ActtttaagaaataatgaacttaAAAACGTTTACGCGTGTGCTTACTTGG
TTTTTCAAAGTAATGATACGATCATCCATGCATTCATTTGTTTTCAACGC
ACTAACATGTACTAATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006133TCONS_00006133Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006133-proteinTCONS_00006133-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063supercontigsc0000063:373958..377374 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.42	7.53	9.1	9.52	5.21	2.7	2.02	3.2	13.26	7.23	63.3	4.87	37.66	25.65	12.75	16.97	3.37	2.01	5.59	18.63	0.79	0.72	4.32	3.04	1.43	1.69	0.43	0.46	2.25	2.35