XLOC_003459 (gene) - C. hemisphaerica

Overview
NameXLOC_003459
Unique NameXLOC_003459
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000062:649561..655381-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003459 ID=XLOC_003459|Name=XLOC_003459|organism=Clytia hemisphaerica|type=gene|length=5821bp|location=Sequence derived from alignment at sc0000062:649561..655381- (Clytia hemisphaerica)
TTGACGTCACAAGTTTTGAAAAAACAAACATGGTGATACCACACAAGGCG AACACAAGACACCAACACATCGCTGCACAAATACTTTTACTGTTTTGTAC AAAAAATCACCTCATCTCATGCTACCAAACGGAATTGAACCACCATTAAA AATGTTGACCAACGCTCAAAAAATACACGCAACGGACCGTCTTTTACAGG ATCTAACAAAATGTGAAAAAGCATTATCCGTCCCTGGCAATTACCACGCT AAACAACGTCGTCGTTTTCATGATGATTCCAAACTTGTCTTCCCTGAAAA CAAAACGCGTAAGAATCGAGAGGACTTCGAAACGCATTATAATTCAAATT TCCAACGCTATCAACCTTGTCGTCCTAGAGAGCGGCCCTGTTCTCCGACC CGTCGAAACAATCCACATCCTTCTAAGGTAACTTCTATTCTTTTCAACAC GTTAATACCCATTGAGTACCAAGCCGAATCTTCAACATTTCCCAATCAAG TTAAAGTGAAGCTTTAAAATTGAGCTGCATTTCGACTGACAGATTAAATC TAGCACTTTCTTTGTTCTCGCGTTTTACATTTTTCAAATTCTGGTGGTCA ATGGTACTTCTATTATCCAGCGTTCGTATGAAACAACTTATGAAGAAAAT GAGTGCGGCTTCCAATTGCACAAAGGAGATTCGACTCTAGCCTTAAGCCG TACCTTATTGGTATACAGTGGACTCCCGCTAATTCAAATTTCTATTATTC GCACCTTTCTATATAAATTCGAACTAATTTTCGATCCCCGTCAATAGGAA AAACTCGGAAAATATTCTATAATTCAAATCTCTTTGTTATTTGGCAAAAT GGATAAGATTTACAGATGATAATGACATGTTAATGAAAAATAACGGTGAT ACGTATACGCTTGCCGTTTCAATGATTCTTGATTCGATTCCCGATCCCAT GCAACTCTCAGCACAATGAGAGTAGGTTTTGCGCTCCACAATTGCAATCG ATAATCTAACTTGATTTCTTTTTAGAATTTTCTAACCTGGAGAANTAACA CGTTAATACCATTGAGTACCAAGCCGAATCTTCAACTTTTCCCAATCAAG AAAAAGTGAAGCCTTAAAATTGAGCTGCATTTCGACTGACAGATTAAATC TAGCACTTTCTTTGTTCTCTCGCGTTTTACGTTTTTCAAATTCTGGTGGT CAATGGTACATTCTATTAGCCAGCGTTCGTATAAAACAACTTATGAAGAA AATGAGTTGCTTCCAATTGTACAAAGGAGATTCGACTCTAGCCTTAAGCC GTACCTTATTGGTATACAGTGGACTCCCGCTAATTCGAATTTCTATTATT CGCACCTTTCTATATAAATTCGAACTAATTTTCGATCCCCGTCAATAGGA AAAACTCGGAAAATATTCTATAATTCAAATCTCTTTCTTATTTGGCAAAA TGGATAAGATTTACAGATGATAATGACATTTTAATGAAAAATAACGGTGA TACGGTTACGCTTGCCGTTTTAATGATTCTTGATTCGATTCCCGATCCCA TGCAACTCTCAGCACAATGAGAGTAGGTTTTGCGCTCCACAATTGCAATC GATAATCTAACTTGATTTCTTTTTAGAATTTTCTAACCTGGAGAATTCCA ACGCGCGTATTTGACTATGGCAAATCAAAAACGGCCAATATTTCCTTCTT AAACTCGAATATTGATGATTCATTCCAAAGCTTTTATAACGATTACTCTG GTCGACGCGGAGGTTTGTACATTTAACATTCAATTCTTTCCATCATTTGA TATTCTTGATCTTTATAATGTTTGCCTACTTGATCGCTTTGACTCTCTTA TGCTGTAACTGTTATTGGGGCTTGATTTTTATAAGAGCTTACACCTGAAG CTCAAGAAGTATAGGTATTAAAAAAAAAGAATCTTATCAACTTTTTGAGA ATCTCACCGACTTGAAAAGGTATTCAATCAACAGTACCTTGAGGCTTGAT AAAAGTTGGGGCCTAGCTGGGAGACGTTTTTCCACTGCTACTTGTGTTTG CCACAACAAACTTTTATTACTCCTGTTTCAGAACGTTCTGCCAACGCTGT AGATGCAAAAATGCTTCTGGAAATGACAAAAAGTTATAGTGGGGCTGAAG CAAAGAAAAAAGAAAACAAGAAGAAAGGAAGAGTAATTTTGAAAAGCGGA GAACCGTCTCAACACGCTTTAACACGTAAGTTCAATCATATCCCAATCCC AAAGCAATACAGTGGTCGGATAATTCAGTTAAAATACAGCATCATTTTCA TAACCATAATCTTTTCGAATTCGACCAATATGTAGGTTAATCTTGAGTGG TGATTAAGAGTAAGAGTAGATGTAATACCTCATTGAAAAATAATTTATCA CCTGATAGAAAAAATCCACGGGTGCGGCCCTTTTTTAATCGGAAATTGCC CCTTTACCACTTTAAATGTGACTATACTTTATATTATTCTAAACAATTTT TTTGCTTATCAAACAACAGAAGCTTGCTATTATTGCTGTCTAATTATCTC CCATCTTTTTAACAATTCTAGTTCCCAGCCTCCTACGCAAATCATGGTCA CCCAGTCAATCTTCACGTGGTCTTCCTGGAAGGTCTGGTAAAGATGCTTT ATCCCCACTTTTCTTGAAAGAAGAATTACAGCCTCTCTTTCAATCATGGT ACGATGCAGCATCTTCTAAAGGTATGTATATTCAACAATTTGATCCTACA ATAAGGACTGTATAGGTAGTCAACTATAGAATTTAGAATTGTGATTCTGA AATATGATCTGTTTTAAAAAGGTACTCATTCAATGACACAATGACAATTT GATCTTACGATAGAGCTTTGGGTAGTATCCAAAACAAAAATTGCAGAATA CCAATATGTCCTATCAATTATAGAATATAAAATTTTGATTCTGAAATATG ATTTGATTTTAGATAAAGGTACAGTATCCAAAACACCAACTGTCGTCGCC GAGATAGAAGAAAGTTATATTCAAAAGGTAATCTTTACTGATGATTGATG ATTGATCCATTCGCTTTGAGTGTGCACTAAAGTTAGTTTTTTCTGTTGAC ACCGATAACAAAAGTCTGTTATACGCTTTAAGTATAAAATTGATTTGCCA TTCGCCAACCAATGCTTCAATTGCCTTCAAATATAACAAATTGTATGCCG TTGAAAAGATAATTCAAAGCACTGTAATTTTTAACGACATGGTTTGGGTT TTTTTCCAGTGTGATCGAAAAGTCGTGGATGATGCTTAAGATTTTACTGT TCTTAAACGAAAGAAACAATCTTTGAAGACCCAATACCAAACTTGCAATA AGTCCCTTAGTATTCTTTTTTACAATTCTCAGAGAGCTCACAAAGAAGTA TGTTCCATCAGGGATTGGCATAAAAATGCTTAAATATTGATAGAAAGAAA GCCATTTAGATTTTATTTAATCCTTCTTTTGATTTTTGCAGGCTTTGGAA AAGGCTTTGAAACCAGATGCTATTGAAGCGATTGAGGAATGGTTACAAGA TGCTAATGAGGAAGGTAAGTAATTTCATTATAACCCTGCTACAGCCTTCT TCAAGGAGCCTTTTATACTCTGATTAATCTTTATAATAAGTCCCTATATA ATATGCAAAATGGACAAAAGTATCGTTTACAGTATGGCCCTTGATGGTCA GCTTCAAGAACATCACTGTCAACCGAGCTTAGTTACGTCTATGTCACATA CGTGTCTCCTAAAAGGATTTCATATAAAAAAAATTCACCCACTATAACAT TTTTAACTCATAGCTGTTTCAGTCCTCTAAATTAAGTCTTGCACTACAGA ATTCTAAACTTTTCATGTCTGACTCATGTGTGTTTTACAATTCTTACTTA GGCACGACGACTGGGCTATTCCGCGGGTAAATTGAAAGTCTTTAAAAGAC TTTCAATTTACCCGCGGAATATTTAGAGCTAAAGAATTATCCAACTTAGC TAGGTAGAACATCAACGTTCGGTCCGCCAAAGCATTTTCTTCCCTTAATC TATTTTTTTCAAAAAGACGTAAAAAGACGCAAGAAAGAGCTCTTCAAGGC TATTAGAAATTTAGGGCGTATAAAACGGGTTGCAGAGGAGTATCTTATAA ATGTTTTAACATTCTTCATTCTTTTCGCTTAGAACGTGAGATTGCCATGC AGTTTATCCAGACTATCTTATTGGCTTCGTTACAACGACAAAAGTTAGAA AAAACGGCAGAAACACAAACCAAAATAATGCCACCGTATAGAAAAAATTT AACACCCCTTCATCGTGACCAACTGCTACCTCCGACAGTTATGAAAAGTA AACCTCATCACCATACTAAAGCTTGTAAAGTTTGCGCACGTAAGAATTTG GAAGGTGCTTTGGAACACTTACAAGCTGTTGCTACTATGCCACAGTAAGT TTGGACTTTAAAAGTTATGGAGAAGTCTTTAATTCGTGTACTCTACTCCG AATTTTTTCAAAATCTAATAAAAGAGGGATCCGAAAAATTGTACCTCCGA AAACCCCGAAAAAGATAATCATTATAAGCCAAAAAAAAACAGGATATTTG GAGCTATCGAGCTTGCGATTGCTGAAAATATTTTTGAAAATAAATAAACG GGTGGTGATGGTTATTCGAGTAGTAGTCTGTCTATACCACAAAACATCGA CAAATTGCTTTATCCTTCTGACGCTCCTTAACAACCATAAGGAAAACCAT AACGAGCCTAACAGTTATTTGTTTCCTAAATAATCTTAGTGAAAAAAAAA ACTTAAATAAAAACACCCTTCTTACAGACCCGGTGAGACCCCCTCTCACT TGAATAATTGACCAAATATCGTCCCCAGTGGAAATTATAATCCGATTTTT GCCCACGCTGAAAATAATCTCACTGCAAAATATTGTTTTTTTTTGTCTCC GCTGAATGTTCTGACTTAAACTCCATGAGCCATAAAAACATGGGAATATC AACCCCATTGAGTTTCAGTCCGTTTTTTAACCCACTGACTGAATAAATAT CCTATCGGGTCTGTGAGAAGGGGATGTATGAGCGTACAAAGTTGAATTTT TGGACCCATCTTTCCAGTGGAAAAGACAGAACCTGGTCTTATATTGGTAC AGTGTAGTCTTGGGTAATGAAACAGATCGCACTTTTTATCAGTTATAACA GTAAGGAAAAATTAAAATAATTCACCGTTAAAATTTGGCTGCAATGCTTC AAAAACCAGTGTGAAAAACTAAGATTTTCCACCGAAAATGTGGTTGAGTT TTTCCTGTGTTGAATAATCTTTACCTTTTCGTTTTTAGTGACACGCCAGG AATTACAGAGCTGATCAACCCATTACATCCTGGAGTTCTTGCACAAAAAG AAGAGCGTAAACGATTTGTGACCGCCGGAAGACGACGTCTCGTTCGACCA AAGAAGAAGTCACCCGAGGGAACAAAATCTTCACTATTTCAAACAACGAA AAAAGCAAAAAGTCGCCATTTTACTATCCATCCTGAATGGTATTGAGCTG GTCTCAAAGCATTCATTCCACTACTTATCCTAACTATTTTTATAAATAGA ATAAAAACACATTTTTGAAAATATACTCAACATCAAAATTTAGGCTTTAT TTATTATACTGTGTTTGTGTTAAAGATAACCAATTAAAAATCATAAATCT TGACTATATTCACTCCAGGAAGACAGTGTGTTTCTCAACAAAATGGGAAA AAATTAATTACTTTATGCTTTTTTCATAAGCAAGTGTCTATACCCCTATA CCAGGCTCGCATTATGCTTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006084TCONS_00006084Clytia hemisphaericatranscript
TCONS_00006083TCONS_00006083Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006083-proteinTCONS_00006083-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000062supercontigsc0000062:649561..655381 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.35 0.56 0.37 0.08 2.84 1.11 0.63 0.78 0.43 0.51 0.4 0.43 0.09 0.22 0.37 0.14 0.49 0.14 0 0.05 0.2 0.23 0.19 0.43 9.91 9.5 0.22 0.1 0.18 0.24